RNA–Protein interactions for RNA: ENST00000585813.5

LINC00906-201, long intergenic non-protein coding RNA 906, humanhuman

TSL 1 (best)

Gene LINC00906, Length 842 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-201ENST00000585813 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
LINC00906-201ENST00000585813 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
LINC00906-201ENST00000585813 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
LINC00906-201ENST00000585813 ABCC9O60706 1549 aa14.69□□□□□ -0.06
LINC00906-201ENST00000585813 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
LINC00906-201ENST00000585813 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
LINC00906-201ENST00000585813 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
LINC00906-201ENST00000585813 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
LINC00906-201ENST00000585813 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
LINC00906-201ENST00000585813 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
LINC00906-201ENST00000585813 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
LINC00906-201ENST00000585813 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
LINC00906-201ENST00000585813 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
LINC00906-201ENST00000585813 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
LINC00906-201ENST00000585813 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00906-201ENST00000585813 NACADO15069 1562 aa13.52□□□□□ -0.25
LINC00906-201ENST00000585813 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
LINC00906-201ENST00000585813 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
LINC00906-201ENST00000585813 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
LINC00906-201ENST00000585813 SENP3Q9H4L4 574 aaPredicted RBP13.28□□□□□ -0.28
LINC00906-201ENST00000585813 PHF23Q9BUL5 403 aaPredicted RBP13.26□□□□□ -0.29
LINC00906-201ENST00000585813 HRCP23327 699 aa13.25□□□□□ -0.29
LINC00906-201ENST00000585813 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
LINC00906-201ENST00000585813 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
LINC00906-201ENST00000585813 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
LINC00906-201ENST00000585813 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
LINC00906-201ENST00000585813 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
LINC00906-201ENST00000585813 TRIM26Q12899 539 aaPredicted RBP13.03□□□□□ -0.32
LINC00906-201ENST00000585813 TRIM41Q8WV44 630 aa13□□□□□ -0.33
LINC00906-201ENST00000585813 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
LINC00906-201ENST00000585813 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
LINC00906-201ENST00000585813 CUX2O14529 1486 aa12.94□□□□□ -0.34
LINC00906-201ENST00000585813 LOC105371045A0A1W2PR82 267 aa12.94□□□□□ -0.34
LINC00906-201ENST00000585813 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
LINC00906-201ENST00000585813 WIZO95785 1651 aa12.85□□□□□ -0.35
LINC00906-201ENST00000585813 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
LINC00906-201ENST00000585813 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
LINC00906-201ENST00000585813 SMARCA4P51532 1647 aa12.79□□□□□ -0.36
LINC00906-201ENST00000585813 EEA1Q15075 1411 aa12.74□□□□□ -0.37
LINC00906-201ENST00000585813 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
LINC00906-201ENST00000585813 PEG3Q9GZU2 1588 aa12.66□□□□□ -0.38
LINC00906-201ENST00000585813 PPARGC1BQ86YN6 1023 aaKnown RBP12.65□□□□□ -0.38
LINC00906-201ENST00000585813 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
LINC00906-201ENST00000585813 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
LINC00906-201ENST00000585813 WRNQ14191 1432 aaPredicted RBP eCLIP12.64□□□□□ -0.39
LINC00906-201ENST00000585813 TNIKQ9UKE5 1360 aa12.57□□□□□ -0.4
LINC00906-201ENST00000585813 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
LINC00906-201ENST00000585813 GOLGA3Q08378 1498 aa12.52□□□□□ -0.41
LINC00906-201ENST00000585813 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
LINC00906-201ENST00000585813 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
LINC00906-201ENST00000585813 KIF21BO75037 1637 aa12.47□□□□□ -0.41
LINC00906-201ENST00000585813 CEP164Q9UPV0 1460 aa12.46□□□□□ -0.42
LINC00906-201ENST00000585813 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
LINC00906-201ENST00000585813 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
LINC00906-201ENST00000585813 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
LINC00906-201ENST00000585813 ATAD2BQ9ULI0 1458 aa12.41□□□□□ -0.42
LINC00906-201ENST00000585813 SOGA1O94964 1423 aa12.41□□□□□ -0.42
LINC00906-201ENST00000585813 NESP48681 1621 aa12.4□□□□□ -0.42
LINC00906-201ENST00000585813 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
LINC00906-201ENST00000585813 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
LINC00906-201ENST00000585813 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
LINC00906-201ENST00000585813 UBTFP17480 764 aaKnown RBP12.34□□□□□ -0.43
LINC00906-201ENST00000585813 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
LINC00906-201ENST00000585813 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
LINC00906-201ENST00000585813 FOXD1Q16676 465 aa12.32□□□□□ -0.44
LINC00906-201ENST00000585813 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
LINC00906-201ENST00000585813 LAMC3Q9Y6N6 1575 aa12.31□□□□□ -0.44
LINC00906-201ENST00000585813 BIVM-ERCC5R4GMW8 1640 aa12.3□□□□□ -0.44
LINC00906-201ENST00000585813 CLIP1P30622 1438 aa12.29□□□□□ -0.44
LINC00906-201ENST00000585813 VPS8Q8N3P4 1428 aa12.29□□□□□ -0.44
LINC00906-201ENST00000585813 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
LINC00906-201ENST00000585813 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
LINC00906-201ENST00000585813 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
LINC00906-201ENST00000585813 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
LINC00906-201ENST00000585813 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
LINC00906-201ENST00000585813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
LINC00906-201ENST00000585813 APLP2Q06481 763 aa12.24□□□□□ -0.45
LINC00906-201ENST00000585813 CENPBP07199 599 aaPredicted RBP12.22□□□□□ -0.45
LINC00906-201ENST00000585813 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.45
LINC00906-201ENST00000585813 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
LINC00906-201ENST00000585813 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
LINC00906-201ENST00000585813 PRXQ9BXM0 1461 aa12.17□□□□□ -0.46
LINC00906-201ENST00000585813 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
LINC00906-201ENST00000585813 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
LINC00906-201ENST00000585813 KIF27Q86VH2 1401 aa12.15□□□□□ -0.46
LINC00906-201ENST00000585813 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
LINC00906-201ENST00000585813 WDR62O43379 1518 aa12.14□□□□□ -0.47
LINC00906-201ENST00000585813 RIMBP3CA6NJZ7 1639 aa12.13□□□□□ -0.47
LINC00906-201ENST00000585813 RIMBP3BA6NNM3 1639 aa12.13□□□□□ -0.47
LINC00906-201ENST00000585813 RIMBP3Q9UFD9 1639 aa12.13□□□□□ -0.47
LINC00906-201ENST00000585813 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
LINC00906-201ENST00000585813 CFTRP13569 1480 aa12.13□□□□□ -0.47
LINC00906-201ENST00000585813 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
LINC00906-201ENST00000585813 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
LINC00906-201ENST00000585813 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
LINC00906-201ENST00000585813 CUX1P39880 1505 aa12.07□□□□□ -0.48
LINC00906-201ENST00000585813 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
LINC00906-201ENST00000585813 ARAP1Q96P48 1450 aa12.05□□□□□ -0.48
LINC00906-201ENST00000585813 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
LINC00906-201ENST00000585813 TTBK1Q5TCY1 1321 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms