RNA–Protein interactions for RNA: ENST00000585170.1

SEPT4-229, Transcript of septin 4, humanhuman

TSL 2

Gene SEPT4, Length 3,544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT4-229ENST00000585170 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
SEPT4-229ENST00000585170 SHROOM4Q9ULL8 1493 aa16.96■□□□□ 0.31
SEPT4-229ENST00000585170 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
SEPT4-229ENST00000585170 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
SEPT4-229ENST00000585170 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.24
SEPT4-229ENST00000585170 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
SEPT4-229ENST00000585170 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
SEPT4-229ENST00000585170 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
SEPT4-229ENST00000585170 ABCC9O60706 1549 aa15.95■□□□□ 0.14
SEPT4-229ENST00000585170 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
SEPT4-229ENST00000585170 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
SEPT4-229ENST00000585170 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
SEPT4-229ENST00000585170 NACADO15069 1562 aa15.66■□□□□ 0.1
SEPT4-229ENST00000585170 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
SEPT4-229ENST00000585170 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
SEPT4-229ENST00000585170 LOC105371045A0A1W2PR82 267 aa15.56■□□□□ 0.08
SEPT4-229ENST00000585170 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
SEPT4-229ENST00000585170 WIZO95785 1651 aa15.44■□□□□ 0.06
SEPT4-229ENST00000585170 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
SEPT4-229ENST00000585170 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
SEPT4-229ENST00000585170 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEPT4-229ENST00000585170 PCGF6Q9BYE7 350 aa15.27■□□□□ 0.03
SEPT4-229ENST00000585170 FAM9AQ8IZU1 332 aaPredicted RBP15.26■□□□□ 0.03
SEPT4-229ENST00000585170 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
SEPT4-229ENST00000585170 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
SEPT4-229ENST00000585170 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
SEPT4-229ENST00000585170 SMARCA4P51532 1647 aa15.18■□□□□ 0.02
SEPT4-229ENST00000585170 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
SEPT4-229ENST00000585170 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
SEPT4-229ENST00000585170 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
SEPT4-229ENST00000585170 HRCP23327 699 aa15.08■□□□□ 0.01
SEPT4-229ENST00000585170 SMARCA2P51531 1590 aa15.06■□□□□ 0
SEPT4-229ENST00000585170 ABCC8Q09428 1581 aa15.06■□□□□ 0
SEPT4-229ENST00000585170 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
SEPT4-229ENST00000585170 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
SEPT4-229ENST00000585170 SOGA1O94964 1423 aa14.89□□□□□ -0.03
SEPT4-229ENST00000585170 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
SEPT4-229ENST00000585170 RUSC2Q8N2Y8 1516 aa14.87□□□□□ -0.03
SEPT4-229ENST00000585170 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
SEPT4-229ENST00000585170 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
SEPT4-229ENST00000585170 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
SEPT4-229ENST00000585170 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.06
SEPT4-229ENST00000585170 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
SEPT4-229ENST00000585170 TTBK1Q5TCY1 1321 aaPredicted RBP14.65□□□□□ -0.06
SEPT4-229ENST00000585170 CEP162Q5TB80 1403 aa14.64□□□□□ -0.07
SEPT4-229ENST00000585170 TNIKQ9UKE5 1360 aa14.57□□□□□ -0.08
SEPT4-229ENST00000585170 UBTFP17480 764 aaKnown RBP14.57□□□□□ -0.08
SEPT4-229ENST00000585170 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
SEPT4-229ENST00000585170 EEA1Q15075 1411 aa14.52□□□□□ -0.09
SEPT4-229ENST00000585170 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
SEPT4-229ENST00000585170 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
SEPT4-229ENST00000585170 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
SEPT4-229ENST00000585170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
SEPT4-229ENST00000585170 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
SEPT4-229ENST00000585170 RANGAP1P46060 587 aaPredicted RBP14.46□□□□□ -0.09
SEPT4-229ENST00000585170 CUX1P39880 1505 aa14.46□□□□□ -0.1
SEPT4-229ENST00000585170 KIF21BO75037 1637 aa14.43□□□□□ -0.1
SEPT4-229ENST00000585170 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
SEPT4-229ENST00000585170 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
SEPT4-229ENST00000585170 CFTRP13569 1480 aa14.42□□□□□ -0.1
SEPT4-229ENST00000585170 CLIP1P30622 1438 aa14.37□□□□□ -0.11
SEPT4-229ENST00000585170 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.11
SEPT4-229ENST00000585170 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
SEPT4-229ENST00000585170 PRXQ9BXM0 1461 aa14.32□□□□□ -0.12
SEPT4-229ENST00000585170 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
SEPT4-229ENST00000585170 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
SEPT4-229ENST00000585170 VPS8Q8N3P4 1428 aa14.27□□□□□ -0.12
SEPT4-229ENST00000585170 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.13
SEPT4-229ENST00000585170 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
SEPT4-229ENST00000585170 NESP48681 1621 aa14.23□□□□□ -0.13
SEPT4-229ENST00000585170 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
SEPT4-229ENST00000585170 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
SEPT4-229ENST00000585170 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.14
SEPT4-229ENST00000585170 KANK4Q5T7N3 995 aaPredicted RBP14.2□□□□□ -0.14
SEPT4-229ENST00000585170 IGF1RP08069 1367 aa14.19□□□□□ -0.14
SEPT4-229ENST00000585170 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
SEPT4-229ENST00000585170 CUX2O14529 1486 aa14.18□□□□□ -0.14
SEPT4-229ENST00000585170 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
SEPT4-229ENST00000585170 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
SEPT4-229ENST00000585170 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
SEPT4-229ENST00000585170 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
SEPT4-229ENST00000585170 CARMIL1Q5VZK9 1371 aa14.06□□□□□ -0.16
SEPT4-229ENST00000585170 APLP2Q06481 763 aa14.06□□□□□ -0.16
SEPT4-229ENST00000585170 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
SEPT4-229ENST00000585170 TOPBP1Q92547 1522 aa14.04□□□□□ -0.16
SEPT4-229ENST00000585170 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.17
SEPT4-229ENST00000585170 P3H3Q8IVL6 736 aa14.02□□□□□ -0.17
SEPT4-229ENST00000585170 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
SEPT4-229ENST00000585170 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
SEPT4-229ENST00000585170 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
SEPT4-229ENST00000585170 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
SEPT4-229ENST00000585170 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
SEPT4-229ENST00000585170 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
SEPT4-229ENST00000585170 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
SEPT4-229ENST00000585170 FHOD3Q2V2M9 1422 aa13.92□□□□□ -0.18
SEPT4-229ENST00000585170 ITGAEP38570 1179 aa13.91□□□□□ -0.18
SEPT4-229ENST00000585170 LAMC3Q9Y6N6 1575 aa13.9□□□□□ -0.18
SEPT4-229ENST00000585170 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
SEPT4-229ENST00000585170 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
SEPT4-229ENST00000585170 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms