RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 AEBP2Q6ZN18 517 aaPredicted RBP13.24□□□□□ -0.29
CRLF3-204ENST00000583527 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
CRLF3-204ENST00000583527 CHIC1Q5VXU3 224 aa12.21□□□□□ -0.45
CRLF3-204ENST00000583527 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
CRLF3-204ENST00000583527 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
CRLF3-204ENST00000583527 CCDC180Q9P1Z9 1646 aa10.97□□□□□ -0.65
CRLF3-204ENST00000583527 POTEDQ86YR6 584 aa10.77□□□□□ -0.69
CRLF3-204ENST00000583527 FOXD1Q16676 465 aa10.64□□□□□ -0.71
CRLF3-204ENST00000583527 ZCCHC6Q5VYS8 1495 aaKnown RBP10.57□□□□□ -0.72
CRLF3-204ENST00000583527 DCAF1Q9Y4B6 1507 aa10.35□□□□□ -0.75
CRLF3-204ENST00000583527 SHROOM4Q9ULL8 1493 aa10.17□□□□□ -0.78
CRLF3-204ENST00000583527 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
CRLF3-204ENST00000583527 ABCC9O60706 1549 aa10.12□□□□□ -0.79
CRLF3-204ENST00000583527 NACADO15069 1562 aa10.08□□□□□ -0.8
CRLF3-204ENST00000583527 SCRIBQ14160 1630 aa10.06□□□□□ -0.8
CRLF3-204ENST00000583527 MSH5O43196 834 aa10.03□□□□□ -0.8
CRLF3-204ENST00000583527 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
CRLF3-204ENST00000583527 RB1CC1Q8TDY2 1594 aa9.98□□□□□ -0.81
CRLF3-204ENST00000583527 UNC13AQ9UPW8 1703 aa9.9□□□□□ -0.82
CRLF3-204ENST00000583527 PIAS4Q8N2W9 510 aaPredicted RBP9.77□□□□□ -0.85
CRLF3-204ENST00000583527 SUPT5HO00267 1087 aaKnown RBP9.73□□□□□ -0.85
CRLF3-204ENST00000583527 BICRAQ9NZM4 1560 aa9.7□□□□□ -0.86
CRLF3-204ENST00000583527 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
CRLF3-204ENST00000583527 RSF1Q96T23 1441 aaPredicted RBP9.66□□□□□ -0.86
CRLF3-204ENST00000583527 CECR2Q9BXF3 1484 aa9.65□□□□□ -0.87
CRLF3-204ENST00000583527 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
CRLF3-204ENST00000583527 MROH2BQ7Z745 1585 aa9.64□□□□□ -0.87
CRLF3-204ENST00000583527 PPP6R1Q9UPN7 881 aa9.61□□□□□ -0.87
CRLF3-204ENST00000583527 WIZO95785 1651 aa9.61□□□□□ -0.87
CRLF3-204ENST00000583527 TOP2AP11388 1531 aaKnown RBP9.55□□□□□ -0.88
CRLF3-204ENST00000583527 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
CRLF3-204ENST00000583527 ADRA2BP18089 450 aa9.53□□□□□ -0.88
CRLF3-204ENST00000583527 PEG3Q9GZU2 1588 aa9.51□□□□□ -0.89
CRLF3-204ENST00000583527 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
CRLF3-204ENST00000583527 PABPN1Q86U42 306 aaKnown RBP eCLIP9.43□□□□□ -0.9
CRLF3-204ENST00000583527 ATAD2BQ9ULI0 1458 aa9.36□□□□□ -0.91
CRLF3-204ENST00000583527 HMGXB3Q12766 1538 aa9.36□□□□□ -0.91
CRLF3-204ENST00000583527 BAZ1BQ9UIG0 1483 aaKnown RBP9.34□□□□□ -0.91
CRLF3-204ENST00000583527 CCDC88BA6NC98 1476 aa9.33□□□□□ -0.92
CRLF3-204ENST00000583527 PLPPR3Q6T4P5 718 aa9.29□□□□□ -0.92
CRLF3-204ENST00000583527 PRDM2Q13029 1718 aa9.27□□□□□ -0.93
CRLF3-204ENST00000583527 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
CRLF3-204ENST00000583527 NCAPD3P42695 1498 aa9.22□□□□□ -0.93
CRLF3-204ENST00000583527 CC2D2AQ9P2K1 1620 aa9.22□□□□□ -0.93
CRLF3-204ENST00000583527 SYNJ1O43426 1573 aa9.18□□□□□ -0.94
CRLF3-204ENST00000583527 BIVM-ERCC5R4GMW8 1640 aa9.15□□□□□ -0.94
CRLF3-204ENST00000583527 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
CRLF3-204ENST00000583527 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
CRLF3-204ENST00000583527 TOP2BQ02880 1626 aa9.11□□□□□ -0.95
CRLF3-204ENST00000583527 CFTRP13569 1480 aa9.08□□□□□ -0.96
CRLF3-204ENST00000583527 CUX1P39880 1505 aa9.05□□□□□ -0.96
CRLF3-204ENST00000583527 EEA1Q15075 1411 aa9.05□□□□□ -0.96
CRLF3-204ENST00000583527 KIF21BO75037 1637 aa9.03□□□□□ -0.96
CRLF3-204ENST00000583527 SOGA1O94964 1423 aa9□□□□□ -0.97
CRLF3-204ENST00000583527 LAMC3Q9Y6N6 1575 aa8.99□□□□□ -0.97
CRLF3-204ENST00000583527 CACNB1Q02641 598 aaPredicted RBP8.98□□□□□ -0.97
CRLF3-204ENST00000583527 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
CRLF3-204ENST00000583527 RUSC2Q8N2Y8 1516 aa8.97□□□□□ -0.97
CRLF3-204ENST00000583527 LOC105371045A0A1W2PR82 267 aa8.97□□□□□ -0.97
CRLF3-204ENST00000583527 GOLGA3Q08378 1498 aa8.96□□□□□ -0.97
CRLF3-204ENST00000583527 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
CRLF3-204ENST00000583527 DNMBPQ6XZF7 1577 aa8.95□□□□□ -0.98
CRLF3-204ENST00000583527 FANCD2Q9BXW9 1451 aa8.95□□□□□ -0.98
CRLF3-204ENST00000583527 WDR97A6NE52 1622 aa8.94□□□□□ -0.98
CRLF3-204ENST00000583527 KIF21AQ7Z4S6 1674 aa8.94□□□□□ -0.98
CRLF3-204ENST00000583527 MAPK8IP2Q13387 824 aaPredicted RBP8.94□□□□□ -0.98
CRLF3-204ENST00000583527 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
CRLF3-204ENST00000583527 ERICH3Q5RHP9 1530 aa8.93□□□□□ -0.98
CRLF3-204ENST00000583527 NESP48681 1621 aa8.92□□□□□ -0.98
CRLF3-204ENST00000583527 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
CRLF3-204ENST00000583527 CEP162Q5TB80 1403 aa8.9□□□□□ -0.98
CRLF3-204ENST00000583527 TOPBP1Q92547 1522 aa8.89□□□□□ -0.99
CRLF3-204ENST00000583527 DMRT2Q9Y5R5 561 aa8.87□□□□□ -0.99
CRLF3-204ENST00000583527 RAPGEF2Q9Y4G8 1499 aa8.87□□□□□ -0.99
CRLF3-204ENST00000583527 TNIKQ9UKE5 1360 aa8.86□□□□□ -0.99
CRLF3-204ENST00000583527 KIF27Q86VH2 1401 aa8.86□□□□□ -0.99
CRLF3-204ENST00000583527 URB2Q14146 1524 aaKnown RBP8.85□□□□□ -0.99
CRLF3-204ENST00000583527 POLA1P09884 1462 aaPredicted RBP8.85□□□□□ -0.99
CRLF3-204ENST00000583527 PRXQ9BXM0 1461 aa8.85□□□□□ -0.99
CRLF3-204ENST00000583527 CUX2O14529 1486 aa8.84□□□□□ -0.99
CRLF3-204ENST00000583527 ABCA5Q8WWZ7 1642 aa8.84□□□□□ -0.99
CRLF3-204ENST00000583527 EHMT2Q96KQ7 1210 aa8.84□□□□□ -0.99
CRLF3-204ENST00000583527 CSRNP3Q8WYN3 585 aa8.83□□□□□ -1
CRLF3-204ENST00000583527 CUL7Q14999 1698 aa8.83□□□□□ -1
CRLF3-204ENST00000583527 ABCA10Q8WWZ4 1543 aa8.83□□□□□ -1
CRLF3-204ENST00000583527 PDS5BQ9NTI5 1447 aa8.8□□□□□ -1
CRLF3-204ENST00000583527 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
CRLF3-204ENST00000583527 PBRM1Q86U86 1689 aa8.79□□□□□ -1
CRLF3-204ENST00000583527 TARBP1Q13395 1621 aaKnown RBP8.79□□□□□ -1
CRLF3-204ENST00000583527 THOC2Q8NI27 1593 aaKnown RBP8.78□□□□□ -1
CRLF3-204ENST00000583527 MRC2Q9UBG0 1479 aa8.78□□□□□ -1
CRLF3-204ENST00000583527 WDR62O43379 1518 aa8.78□□□□□ -1
CRLF3-204ENST00000583527 CLIP1P30622 1438 aa8.78□□□□□ -1
CRLF3-204ENST00000583527 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1
CRLF3-204ENST00000583527 DNAJC5BQ9UF47 199 aa8.76□□□□□ -1.01
CRLF3-204ENST00000583527 ARAP1Q96P48 1450 aa8.75□□□□□ -1.01
CRLF3-204ENST00000583527 VPS8Q8N3P4 1428 aa8.74□□□□□ -1.01
CRLF3-204ENST00000583527 ADAMTS12P58397 1594 aa8.73□□□□□ -1.01
CRLF3-204ENST00000583527 UBTFP17480 764 aaKnown RBP8.72□□□□□ -1.01
CRLF3-204ENST00000583527 EIF4G3O43432 1585 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms