RNA–Protein interactions for RNA: ENST00000580177.5

PRR11-205, Transcript of proline rich 11, humanhuman

TSL 1 (best)

Gene PRR11, Length 1,641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR11-205ENST00000580177 AEBP2Q6ZN18 517 aaPredicted RBP21.79■■□□□ 1.08
PRR11-205ENST00000580177 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
PRR11-205ENST00000580177 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
PRR11-205ENST00000580177 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
PRR11-205ENST00000580177 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
PRR11-205ENST00000580177 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
PRR11-205ENST00000580177 FOXD1Q16676 465 aa17.59■□□□□ 0.41
PRR11-205ENST00000580177 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
PRR11-205ENST00000580177 MSH5O43196 834 aa16.88■□□□□ 0.29
PRR11-205ENST00000580177 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
PRR11-205ENST00000580177 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
PRR11-205ENST00000580177 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
PRR11-205ENST00000580177 PIAS4Q8N2W9 510 aaPredicted RBP16.22■□□□□ 0.19
PRR11-205ENST00000580177 DCAF8L2P0C7V8 631 aa15.96■□□□□ 0.15
PRR11-205ENST00000580177 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
PRR11-205ENST00000580177 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
PRR11-205ENST00000580177 ABCC9O60706 1549 aa15.74■□□□□ 0.11
PRR11-205ENST00000580177 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
PRR11-205ENST00000580177 NACADO15069 1562 aa15.7■□□□□ 0.1
PRR11-205ENST00000580177 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
PRR11-205ENST00000580177 ADRA2BP18089 450 aa15.61■□□□□ 0.09
PRR11-205ENST00000580177 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
PRR11-205ENST00000580177 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
PRR11-205ENST00000580177 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
PRR11-205ENST00000580177 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
PRR11-205ENST00000580177 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
PRR11-205ENST00000580177 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
PRR11-205ENST00000580177 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
PRR11-205ENST00000580177 WIZO95785 1651 aa15.13■□□□□ 0.01
PRR11-205ENST00000580177 SMARCA4P51532 1647 aa15.06■□□□□ 0
PRR11-205ENST00000580177 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
PRR11-205ENST00000580177 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
PRR11-205ENST00000580177 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
PRR11-205ENST00000580177 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
PRR11-205ENST00000580177 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
PRR11-205ENST00000580177 LOC105371045A0A1W2PR82 267 aa14.88□□□□□ -0.03
PRR11-205ENST00000580177 HRCP23327 699 aa14.88□□□□□ -0.03
PRR11-205ENST00000580177 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
PRR11-205ENST00000580177 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
PRR11-205ENST00000580177 PCGF6Q9BYE7 350 aa14.82□□□□□ -0.04
PRR11-205ENST00000580177 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
PRR11-205ENST00000580177 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.05
PRR11-205ENST00000580177 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
PRR11-205ENST00000580177 EEA1Q15075 1411 aa14.69□□□□□ -0.06
PRR11-205ENST00000580177 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
PRR11-205ENST00000580177 ABCC8Q09428 1581 aa14.67□□□□□ -0.06
PRR11-205ENST00000580177 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
PRR11-205ENST00000580177 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
PRR11-205ENST00000580177 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRR11-205ENST00000580177 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
PRR11-205ENST00000580177 ZEB1P37275 1124 aaPredicted RBP14.56□□□□□ -0.08
PRR11-205ENST00000580177 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
PRR11-205ENST00000580177 HMGXB3Q12766 1538 aa14.52□□□□□ -0.09
PRR11-205ENST00000580177 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
PRR11-205ENST00000580177 KIF21BO75037 1637 aa14.48□□□□□ -0.09
PRR11-205ENST00000580177 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
PRR11-205ENST00000580177 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
PRR11-205ENST00000580177 CEP162Q5TB80 1403 aa14.43□□□□□ -0.1
PRR11-205ENST00000580177 SOGA1O94964 1423 aa14.43□□□□□ -0.1
PRR11-205ENST00000580177 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
PRR11-205ENST00000580177 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
PRR11-205ENST00000580177 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
PRR11-205ENST00000580177 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
PRR11-205ENST00000580177 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
PRR11-205ENST00000580177 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
PRR11-205ENST00000580177 NCAPD3P42695 1498 aa14.4□□□□□ -0.1
PRR11-205ENST00000580177 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
PRR11-205ENST00000580177 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
PRR11-205ENST00000580177 PPARGC1BQ86YN6 1023 aaKnown RBP14.31□□□□□ -0.12
PRR11-205ENST00000580177 UBTFP17480 764 aaKnown RBP14.3□□□□□ -0.12
PRR11-205ENST00000580177 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
PRR11-205ENST00000580177 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
PRR11-205ENST00000580177 CFTRP13569 1480 aa14.22□□□□□ -0.13
PRR11-205ENST00000580177 CLIP1P30622 1438 aa14.22□□□□□ -0.13
PRR11-205ENST00000580177 CUX1P39880 1505 aa14.18□□□□□ -0.14
PRR11-205ENST00000580177 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
PRR11-205ENST00000580177 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
PRR11-205ENST00000580177 RAPGEF2Q9Y4G8 1499 aa14.16□□□□□ -0.14
PRR11-205ENST00000580177 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
PRR11-205ENST00000580177 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
PRR11-205ENST00000580177 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
PRR11-205ENST00000580177 APLP2Q06481 763 aa14.09□□□□□ -0.15
PRR11-205ENST00000580177 CC2D2AQ9P2K1 1620 aa14.09□□□□□ -0.15
PRR11-205ENST00000580177 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
PRR11-205ENST00000580177 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
PRR11-205ENST00000580177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
PRR11-205ENST00000580177 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
PRR11-205ENST00000580177 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
PRR11-205ENST00000580177 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
PRR11-205ENST00000580177 CUX2O14529 1486 aa13.96□□□□□ -0.17
PRR11-205ENST00000580177 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
PRR11-205ENST00000580177 POTEHQ6S545 545 aa13.95□□□□□ -0.18
PRR11-205ENST00000580177 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
PRR11-205ENST00000580177 CUL7Q14999 1698 aa13.93□□□□□ -0.18
PRR11-205ENST00000580177 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
PRR11-205ENST00000580177 MAP3K1Q13233 1512 aa13.89□□□□□ -0.19
PRR11-205ENST00000580177 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
PRR11-205ENST00000580177 CTTNBP2Q8WZ74 1663 aa13.87□□□□□ -0.19
PRR11-205ENST00000580177 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
PRR11-205ENST00000580177 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms