RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 NISCHQ9Y2I1 1504 aa6.27□□□□□ -1.41
SNORD53-201ENST00000579969 ABCC9O60706 1549 aa6.1□□□□□ -1.43
SNORD53-201ENST00000579969 DNAJC5BQ9UF47 199 aa6.1□□□□□ -1.43
SNORD53-201ENST00000579969 DNAJC5Q9H3Z4 198 aa5.84□□□□□ -1.47
SNORD53-201ENST00000579969 PABPN1Q86U42 306 aaKnown RBP eCLIP5.71□□□□□ -1.5
SNORD53-201ENST00000579969 CCDC180Q9P1Z9 1646 aa5.67□□□□□ -1.5
SNORD53-201ENST00000579969 RB1CC1Q8TDY2 1594 aa5.62□□□□□ -1.51
SNORD53-201ENST00000579969 DCAF8L2P0C7V8 631 aa5.59□□□□□ -1.51
SNORD53-201ENST00000579969 CECR2Q9BXF3 1484 aa5.53□□□□□ -1.52
SNORD53-201ENST00000579969 NACADO15069 1562 aa5.51□□□□□ -1.53
SNORD53-201ENST00000579969 BICRAQ9NZM4 1560 aa5.46□□□□□ -1.53
SNORD53-201ENST00000579969 TRIM41Q8WV44 630 aa5.46□□□□□ -1.54
SNORD53-201ENST00000579969 CC2D2AQ9P2K1 1620 aa5.45□□□□□ -1.54
SNORD53-201ENST00000579969 UNC13AQ9UPW8 1703 aa5.43□□□□□ -1.54
SNORD53-201ENST00000579969 CUX2O14529 1486 aa5.36□□□□□ -1.55
SNORD53-201ENST00000579969 EIF4G1Q04637 1599 aaKnown RBP5.36□□□□□ -1.55
SNORD53-201ENST00000579969 SHROOM4Q9ULL8 1493 aa5.32□□□□□ -1.56
SNORD53-201ENST00000579969 MYO15BQ96JP2 1530 aa5.31□□□□□ -1.56
SNORD53-201ENST00000579969 ERCC6Q03468 1493 aa5.29□□□□□ -1.56
SNORD53-201ENST00000579969 SCRIBQ14160 1630 aa5.24□□□□□ -1.57
SNORD53-201ENST00000579969 AEBP2Q6ZN18 517 aaPredicted RBP5.24□□□□□ -1.57
SNORD53-201ENST00000579969 OSCARQ8IYS5 282 aa5.18□□□□□ -1.58
SNORD53-201ENST00000579969 NESP48681 1621 aa5.15□□□□□ -1.59
SNORD53-201ENST00000579969 TRHP20396 242 aaPredicted RBP5.14□□□□□ -1.59
SNORD53-201ENST00000579969 NCAPD3P42695 1498 aa5.13□□□□□ -1.59
SNORD53-201ENST00000579969 DCAF1Q9Y4B6 1507 aa5.13□□□□□ -1.59
SNORD53-201ENST00000579969 CYB5RLQ6IPT4 315 aa5.1□□□□□ -1.59
SNORD53-201ENST00000579969 ZCCHC6Q5VYS8 1495 aaKnown RBP5.09□□□□□ -1.59
SNORD53-201ENST00000579969 THOC2Q8NI27 1593 aaKnown RBP5.08□□□□□ -1.6
SNORD53-201ENST00000579969 ATAD2BQ9ULI0 1458 aa5.07□□□□□ -1.6
SNORD53-201ENST00000579969 PDS5BQ9NTI5 1447 aa5.06□□□□□ -1.6
SNORD53-201ENST00000579969 ILDR1Q86SU0 546 aaPredicted RBP5.06□□□□□ -1.6
SNORD53-201ENST00000579969 SMARCA2P51531 1590 aa5.05□□□□□ -1.6
SNORD53-201ENST00000579969 BAZ1AQ9NRL2 1556 aaPredicted RBP5.03□□□□□ -1.6
SNORD53-201ENST00000579969 RIMBP3CA6NJZ7 1639 aa5.01□□□□□ -1.61
SNORD53-201ENST00000579969 RIMBP3BA6NNM3 1639 aa5.01□□□□□ -1.61
SNORD53-201ENST00000579969 RIMBP3Q9UFD9 1639 aa5.01□□□□□ -1.61
SNORD53-201ENST00000579969 LAMC3Q9Y6N6 1575 aa5.01□□□□□ -1.61
SNORD53-201ENST00000579969 KIF21AQ7Z4S6 1674 aa5□□□□□ -1.61
SNORD53-201ENST00000579969 HMGXB3Q12766 1538 aa4.99□□□□□ -1.61
SNORD53-201ENST00000579969 CADPSQ9ULU8 1353 aa4.99□□□□□ -1.61
SNORD53-201ENST00000579969 MRC2Q9UBG0 1479 aa4.99□□□□□ -1.61
SNORD53-201ENST00000579969 ARHGEF11O15085 1522 aa4.98□□□□□ -1.61
SNORD53-201ENST00000579969 BAZ1BQ9UIG0 1483 aaKnown RBP4.98□□□□□ -1.61
SNORD53-201ENST00000579969 WDR62O43379 1518 aa4.96□□□□□ -1.62
SNORD53-201ENST00000579969 FBLN2P98095 1184 aa4.92□□□□□ -1.62
SNORD53-201ENST00000579969 SMARCA4P51532 1647 aa4.92□□□□□ -1.62
SNORD53-201ENST00000579969 ARAP1Q96P48 1450 aa4.92□□□□□ -1.62
SNORD53-201ENST00000579969 CEP164Q9UPV0 1460 aa4.91□□□□□ -1.62
SNORD53-201ENST00000579969 FANCD2Q9BXW9 1451 aa4.89□□□□□ -1.63
SNORD53-201ENST00000579969 ZNF608Q9ULD9 1512 aaPredicted RBP4.87□□□□□ -1.63
SNORD53-201ENST00000579969 PEG3Q9GZU2 1588 aa4.87□□□□□ -1.63
SNORD53-201ENST00000579969 KDM4FA0A1W2PPD8 638 aa4.86□□□□□ -1.63
SNORD53-201ENST00000579969 RSF1Q96T23 1441 aaPredicted RBP4.86□□□□□ -1.63
SNORD53-201ENST00000579969 URB2Q14146 1524 aaKnown RBP4.86□□□□□ -1.63
SNORD53-201ENST00000579969 IFT140Q96RY7 1462 aa4.83□□□□□ -1.64
SNORD53-201ENST00000579969 MROH2BQ7Z745 1585 aa4.82□□□□□ -1.64
SNORD53-201ENST00000579969 CFTRP13569 1480 aa4.82□□□□□ -1.64
SNORD53-201ENST00000579969 AQRO60306 1485 aaKnown RBP eCLIP4.81□□□□□ -1.64
SNORD53-201ENST00000579969 CHMP7Q8WUX9 453 aaPredicted RBP4.81□□□□□ -1.64
SNORD53-201ENST00000579969 FBXO41Q8TF61 875 aa4.8□□□□□ -1.64
SNORD53-201ENST00000579969 CHD1O14646 1710 aa4.78□□□□□ -1.64
SNORD53-201ENST00000579969 GAPVD1Q14C86 1478 aa4.77□□□□□ -1.65
SNORD53-201ENST00000579969 SOCS7O14512 581 aa4.76□□□□□ -1.65
SNORD53-201ENST00000579969 FAM69CQ0P6D2 419 aa4.76□□□□□ -1.65
SNORD53-201ENST00000579969 TDRD9Q8NDG6 1382 aaKnown RBP4.76□□□□□ -1.65
SNORD53-201ENST00000579969 EIF4G3O43432 1585 aaKnown RBP4.75□□□□□ -1.65
SNORD53-201ENST00000579969 TOPBP1Q92547 1522 aa4.75□□□□□ -1.65
SNORD53-201ENST00000579969 ABCC8Q09428 1581 aa4.74□□□□□ -1.65
SNORD53-201ENST00000579969 LMTK3Q96Q04 1460 aa4.74□□□□□ -1.65
SNORD53-201ENST00000579969 CLASP1Q7Z460 1538 aa4.73□□□□□ -1.65
SNORD53-201ENST00000579969 WIZO95785 1651 aa4.73□□□□□ -1.65
SNORD53-201ENST00000579969 NPM1P06748 294 aaKnown RBP eCLIP4.72□□□□□ -1.65
SNORD53-201ENST00000579969 ILDR2Q71H61 639 aa4.72□□□□□ -1.65
SNORD53-201ENST00000579969 SYNJ1O43426 1573 aa4.72□□□□□ -1.65
SNORD53-201ENST00000579969 SOGA1O94964 1423 aa4.71□□□□□ -1.66
SNORD53-201ENST00000579969 SNAPC4Q5SXM2 1469 aa4.7□□□□□ -1.66
SNORD53-201ENST00000579969 RAD54L2Q9Y4B4 1467 aa4.7□□□□□ -1.66
SNORD53-201ENST00000579969 TARBP1Q13395 1621 aaKnown RBP4.7□□□□□ -1.66
SNORD53-201ENST00000579969 ERCC6L2Q5T890 1561 aa4.7□□□□□ -1.66
SNORD53-201ENST00000579969 SYNJ2O15056 1496 aa4.69□□□□□ -1.66
SNORD53-201ENST00000579969 POLA1P09884 1462 aaPredicted RBP4.69□□□□□ -1.66
SNORD53-201ENST00000579969 KIF13AQ9H1H9 1805 aa4.68□□□□□ -1.66
SNORD53-201ENST00000579969 HECW2Q9P2P5 1572 aa4.68□□□□□ -1.66
SNORD53-201ENST00000579969 ABCC10Q5T3U5 1492 aa4.68□□□□□ -1.66
SNORD53-201ENST00000579969 MAGI1Q96QZ7 1491 aaPredicted RBP4.68□□□□□ -1.66
SNORD53-201ENST00000579969 DISP3Q9P2K9 1392 aa4.67□□□□□ -1.66
SNORD53-201ENST00000579969 DNMBPQ6XZF7 1577 aa4.67□□□□□ -1.66
SNORD53-201ENST00000579969 GRIN2BQ13224 1484 aa4.67□□□□□ -1.66
SNORD53-201ENST00000579969 ADGRL1O94910 1474 aa4.66□□□□□ -1.66
SNORD53-201ENST00000579969 KDM6BO15054 1643 aa4.65□□□□□ -1.66
SNORD53-201ENST00000579969 CCDC88BA6NC98 1476 aa4.65□□□□□ -1.66
SNORD53-201ENST00000579969 JPH4Q96JJ6 628 aa4.65□□□□□ -1.67
SNORD53-201ENST00000579969 TOP2AP11388 1531 aaKnown RBP4.63□□□□□ -1.67
SNORD53-201ENST00000579969 PRDM2Q13029 1718 aa4.63□□□□□ -1.67
SNORD53-201ENST00000579969 CEP170Q5SW79 1584 aa4.62□□□□□ -1.67
SNORD53-201ENST00000579969 TSPOAP1O95153 1857 aa4.62□□□□□ -1.67
SNORD53-201ENST00000579969 PRG4Q92954 1404 aaPredicted RBP4.62□□□□□ -1.67
SNORD53-201ENST00000579969 FGD5Q6ZNL6 1462 aa4.61□□□□□ -1.67
SNORD53-201ENST00000579969 CERKQ8TCT0 537 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms