RNA–Protein interactions for RNA: ENST00000579742.5

LRRC46-202, Transcript of leucine rich repeat containing 46, humanhuman

TSL 5

Gene LRRC46, Length 847 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46-202ENST00000579742 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
LRRC46-202ENST00000579742 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
LRRC46-202ENST00000579742 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
LRRC46-202ENST00000579742 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
LRRC46-202ENST00000579742 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
LRRC46-202ENST00000579742 ABCC9O60706 1549 aa20.07■□□□□ 0.8
LRRC46-202ENST00000579742 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
LRRC46-202ENST00000579742 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.8
LRRC46-202ENST00000579742 MYO15BQ96JP2 1530 aa19.85■□□□□ 0.77
LRRC46-202ENST00000579742 NACADO15069 1562 aa19.74■□□□□ 0.75
LRRC46-202ENST00000579742 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
LRRC46-202ENST00000579742 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
LRRC46-202ENST00000579742 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
LRRC46-202ENST00000579742 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
LRRC46-202ENST00000579742 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
LRRC46-202ENST00000579742 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
LRRC46-202ENST00000579742 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
LRRC46-202ENST00000579742 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
LRRC46-202ENST00000579742 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
LRRC46-202ENST00000579742 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
LRRC46-202ENST00000579742 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
LRRC46-202ENST00000579742 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
LRRC46-202ENST00000579742 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
LRRC46-202ENST00000579742 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
LRRC46-202ENST00000579742 WIZO95785 1651 aa18.42■□□□□ 0.54
LRRC46-202ENST00000579742 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
LRRC46-202ENST00000579742 FOXD1Q16676 465 aa18.38■□□□□ 0.53
LRRC46-202ENST00000579742 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
LRRC46-202ENST00000579742 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
LRRC46-202ENST00000579742 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.53
LRRC46-202ENST00000579742 TOP2AP11388 1531 aaKnown RBP18.32■□□□□ 0.52
LRRC46-202ENST00000579742 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
LRRC46-202ENST00000579742 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
LRRC46-202ENST00000579742 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
LRRC46-202ENST00000579742 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
LRRC46-202ENST00000579742 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
LRRC46-202ENST00000579742 CFTRP13569 1480 aa17.77■□□□□ 0.44
LRRC46-202ENST00000579742 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
LRRC46-202ENST00000579742 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
LRRC46-202ENST00000579742 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
LRRC46-202ENST00000579742 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
LRRC46-202ENST00000579742 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
LRRC46-202ENST00000579742 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
LRRC46-202ENST00000579742 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
LRRC46-202ENST00000579742 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
LRRC46-202ENST00000579742 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
LRRC46-202ENST00000579742 NESP48681 1621 aa17.54■□□□□ 0.4
LRRC46-202ENST00000579742 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
LRRC46-202ENST00000579742 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
LRRC46-202ENST00000579742 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
LRRC46-202ENST00000579742 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
LRRC46-202ENST00000579742 CUX1P39880 1505 aa17.43■□□□□ 0.38
LRRC46-202ENST00000579742 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
LRRC46-202ENST00000579742 EEA1Q15075 1411 aa17.39■□□□□ 0.38
LRRC46-202ENST00000579742 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
LRRC46-202ENST00000579742 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
LRRC46-202ENST00000579742 SOGA1O94964 1423 aa17.32■□□□□ 0.36
LRRC46-202ENST00000579742 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
LRRC46-202ENST00000579742 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
LRRC46-202ENST00000579742 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
LRRC46-202ENST00000579742 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
LRRC46-202ENST00000579742 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
LRRC46-202ENST00000579742 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
LRRC46-202ENST00000579742 KIF21AQ7Z4S6 1674 aa17.28■□□□□ 0.36
LRRC46-202ENST00000579742 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
LRRC46-202ENST00000579742 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
LRRC46-202ENST00000579742 LOC105371045A0A1W2PR82 267 aa17.23■□□□□ 0.35
LRRC46-202ENST00000579742 RUSC2Q8N2Y8 1516 aa17.22■□□□□ 0.35
LRRC46-202ENST00000579742 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
LRRC46-202ENST00000579742 ADRA2BP18089 450 aa17.2■□□□□ 0.34
LRRC46-202ENST00000579742 CUX2O14529 1486 aa17.18■□□□□ 0.34
LRRC46-202ENST00000579742 WDR62O43379 1518 aa17.16■□□□□ 0.34
LRRC46-202ENST00000579742 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
LRRC46-202ENST00000579742 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
LRRC46-202ENST00000579742 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
LRRC46-202ENST00000579742 MSH5O43196 834 aa17.1■□□□□ 0.33
LRRC46-202ENST00000579742 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
LRRC46-202ENST00000579742 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
LRRC46-202ENST00000579742 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
LRRC46-202ENST00000579742 KIF21BO75037 1637 aa17.07■□□□□ 0.32
LRRC46-202ENST00000579742 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
LRRC46-202ENST00000579742 IGF1RP08069 1367 aa17.06■□□□□ 0.32
LRRC46-202ENST00000579742 UBTFP17480 764 aaKnown RBP17.04■□□□□ 0.32
LRRC46-202ENST00000579742 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
LRRC46-202ENST00000579742 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
LRRC46-202ENST00000579742 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
LRRC46-202ENST00000579742 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
LRRC46-202ENST00000579742 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
LRRC46-202ENST00000579742 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
LRRC46-202ENST00000579742 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
LRRC46-202ENST00000579742 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
LRRC46-202ENST00000579742 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
LRRC46-202ENST00000579742 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
LRRC46-202ENST00000579742 CUL7Q14999 1698 aa16.92■□□□□ 0.3
LRRC46-202ENST00000579742 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
LRRC46-202ENST00000579742 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.3
LRRC46-202ENST00000579742 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
LRRC46-202ENST00000579742 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
LRRC46-202ENST00000579742 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
LRRC46-202ENST00000579742 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms