RNA–Protein interactions for RNA: ENST00000579020.5

GDPD1-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 5

Gene GDPD1, Length 834 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-203ENST00000579020 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
GDPD1-203ENST00000579020 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
GDPD1-203ENST00000579020 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
GDPD1-203ENST00000579020 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
GDPD1-203ENST00000579020 ABCC9O60706 1549 aa21.44■■□□□ 1.02
GDPD1-203ENST00000579020 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
GDPD1-203ENST00000579020 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
GDPD1-203ENST00000579020 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
GDPD1-203ENST00000579020 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
GDPD1-203ENST00000579020 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
GDPD1-203ENST00000579020 NACADO15069 1562 aa19.88■□□□□ 0.77
GDPD1-203ENST00000579020 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
GDPD1-203ENST00000579020 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
GDPD1-203ENST00000579020 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
GDPD1-203ENST00000579020 FOXD1Q16676 465 aa19.57■□□□□ 0.72
GDPD1-203ENST00000579020 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
GDPD1-203ENST00000579020 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
GDPD1-203ENST00000579020 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
GDPD1-203ENST00000579020 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
GDPD1-203ENST00000579020 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
GDPD1-203ENST00000579020 ADRA2BP18089 450 aa19.34■□□□□ 0.69
GDPD1-203ENST00000579020 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
GDPD1-203ENST00000579020 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
GDPD1-203ENST00000579020 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
GDPD1-203ENST00000579020 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
GDPD1-203ENST00000579020 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
GDPD1-203ENST00000579020 CUX2O14529 1486 aa18.81■□□□□ 0.6
GDPD1-203ENST00000579020 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
GDPD1-203ENST00000579020 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
GDPD1-203ENST00000579020 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
GDPD1-203ENST00000579020 KCNA4P22459 653 aa18.51■□□□□ 0.55
GDPD1-203ENST00000579020 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
GDPD1-203ENST00000579020 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
GDPD1-203ENST00000579020 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
GDPD1-203ENST00000579020 NESP48681 1621 aa18.2■□□□□ 0.5
GDPD1-203ENST00000579020 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
GDPD1-203ENST00000579020 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
GDPD1-203ENST00000579020 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
GDPD1-203ENST00000579020 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
GDPD1-203ENST00000579020 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
GDPD1-203ENST00000579020 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
GDPD1-203ENST00000579020 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
GDPD1-203ENST00000579020 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
GDPD1-203ENST00000579020 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
GDPD1-203ENST00000579020 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
GDPD1-203ENST00000579020 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
GDPD1-203ENST00000579020 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
GDPD1-203ENST00000579020 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
GDPD1-203ENST00000579020 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
GDPD1-203ENST00000579020 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
GDPD1-203ENST00000579020 WDR62O43379 1518 aa17.8■□□□□ 0.44
GDPD1-203ENST00000579020 MSH5O43196 834 aa17.77■□□□□ 0.44
GDPD1-203ENST00000579020 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
GDPD1-203ENST00000579020 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
GDPD1-203ENST00000579020 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
GDPD1-203ENST00000579020 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
GDPD1-203ENST00000579020 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
GDPD1-203ENST00000579020 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
GDPD1-203ENST00000579020 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
GDPD1-203ENST00000579020 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
GDPD1-203ENST00000579020 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.41
GDPD1-203ENST00000579020 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
GDPD1-203ENST00000579020 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
GDPD1-203ENST00000579020 ARHGEF11O15085 1522 aa17.52■□□□□ 0.39
GDPD1-203ENST00000579020 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
GDPD1-203ENST00000579020 CYB5RLQ6IPT4 315 aa17.47■□□□□ 0.39
GDPD1-203ENST00000579020 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
GDPD1-203ENST00000579020 CFTRP13569 1480 aa17.4■□□□□ 0.38
GDPD1-203ENST00000579020 URB2Q14146 1524 aaKnown RBP17.4■□□□□ 0.38
GDPD1-203ENST00000579020 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
GDPD1-203ENST00000579020 WIZO95785 1651 aa17.36■□□□□ 0.37
GDPD1-203ENST00000579020 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
GDPD1-203ENST00000579020 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
GDPD1-203ENST00000579020 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
GDPD1-203ENST00000579020 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
GDPD1-203ENST00000579020 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
GDPD1-203ENST00000579020 CHD1O14646 1710 aa17.2■□□□□ 0.34
GDPD1-203ENST00000579020 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
GDPD1-203ENST00000579020 FBLN2P98095 1184 aa17.14■□□□□ 0.33
GDPD1-203ENST00000579020 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
GDPD1-203ENST00000579020 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
GDPD1-203ENST00000579020 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
GDPD1-203ENST00000579020 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
GDPD1-203ENST00000579020 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
GDPD1-203ENST00000579020 ZBTB22O15209 634 aa17.04■□□□□ 0.32
GDPD1-203ENST00000579020 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
GDPD1-203ENST00000579020 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
GDPD1-203ENST00000579020 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
GDPD1-203ENST00000579020 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
GDPD1-203ENST00000579020 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
GDPD1-203ENST00000579020 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
GDPD1-203ENST00000579020 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
GDPD1-203ENST00000579020 POLA1P09884 1462 aaPredicted RBP16.9■□□□□ 0.3
GDPD1-203ENST00000579020 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
GDPD1-203ENST00000579020 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
GDPD1-203ENST00000579020 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
GDPD1-203ENST00000579020 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
GDPD1-203ENST00000579020 SOGA1O94964 1423 aa16.85■□□□□ 0.29
GDPD1-203ENST00000579020 MAGI1Q96QZ7 1491 aaPredicted RBP16.85■□□□□ 0.29
GDPD1-203ENST00000579020 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms