RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
RTTN-202ENST00000578780 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
RTTN-202ENST00000578780 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
RTTN-202ENST00000578780 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
RTTN-202ENST00000578780 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
RTTN-202ENST00000578780 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
RTTN-202ENST00000578780 ABCC9O60706 1549 aa17.93■□□□□ 0.46
RTTN-202ENST00000578780 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.43
RTTN-202ENST00000578780 NACADO15069 1562 aa17.66■□□□□ 0.42
RTTN-202ENST00000578780 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
RTTN-202ENST00000578780 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
RTTN-202ENST00000578780 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
RTTN-202ENST00000578780 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
RTTN-202ENST00000578780 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.33
RTTN-202ENST00000578780 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.32
RTTN-202ENST00000578780 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
RTTN-202ENST00000578780 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
RTTN-202ENST00000578780 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
RTTN-202ENST00000578780 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
RTTN-202ENST00000578780 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
RTTN-202ENST00000578780 WIZO95785 1651 aa16.78■□□□□ 0.28
RTTN-202ENST00000578780 SMARCA4P51532 1647 aa16.77■□□□□ 0.28
RTTN-202ENST00000578780 HRCP23327 699 aa16.69■□□□□ 0.26
RTTN-202ENST00000578780 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
RTTN-202ENST00000578780 MYT1Q01538 1121 aa16.61■□□□□ 0.25
RTTN-202ENST00000578780 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
RTTN-202ENST00000578780 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
RTTN-202ENST00000578780 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
RTTN-202ENST00000578780 SMARCA2P51531 1590 aa16.46■□□□□ 0.22
RTTN-202ENST00000578780 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
RTTN-202ENST00000578780 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
RTTN-202ENST00000578780 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
RTTN-202ENST00000578780 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
RTTN-202ENST00000578780 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
RTTN-202ENST00000578780 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
RTTN-202ENST00000578780 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
RTTN-202ENST00000578780 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
RTTN-202ENST00000578780 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
RTTN-202ENST00000578780 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
RTTN-202ENST00000578780 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
RTTN-202ENST00000578780 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
RTTN-202ENST00000578780 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.16
RTTN-202ENST00000578780 CFTRP13569 1480 aa15.99■□□□□ 0.15
RTTN-202ENST00000578780 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
RTTN-202ENST00000578780 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
RTTN-202ENST00000578780 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
RTTN-202ENST00000578780 SOGA1O94964 1423 aa15.88■□□□□ 0.13
RTTN-202ENST00000578780 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
RTTN-202ENST00000578780 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
RTTN-202ENST00000578780 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
RTTN-202ENST00000578780 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
RTTN-202ENST00000578780 EEA1Q15075 1411 aa15.82■□□□□ 0.12
RTTN-202ENST00000578780 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
RTTN-202ENST00000578780 BIVM-ERCC5R4GMW8 1640 aa15.81■□□□□ 0.12
RTTN-202ENST00000578780 TTBK1Q5TCY1 1321 aaPredicted RBP15.81■□□□□ 0.12
RTTN-202ENST00000578780 CUX1P39880 1505 aa15.8■□□□□ 0.12
RTTN-202ENST00000578780 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
RTTN-202ENST00000578780 NESP48681 1621 aa15.77■□□□□ 0.12
RTTN-202ENST00000578780 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
RTTN-202ENST00000578780 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
RTTN-202ENST00000578780 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
RTTN-202ENST00000578780 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
RTTN-202ENST00000578780 GOLGA3Q08378 1498 aa15.63■□□□□ 0.09
RTTN-202ENST00000578780 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
RTTN-202ENST00000578780 FGD5Q6ZNL6 1462 aa15.61■□□□□ 0.09
RTTN-202ENST00000578780 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
RTTN-202ENST00000578780 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
RTTN-202ENST00000578780 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
RTTN-202ENST00000578780 KIF21BO75037 1637 aa15.6■□□□□ 0.09
RTTN-202ENST00000578780 TOPBP1Q92547 1522 aa15.58■□□□□ 0.09
RTTN-202ENST00000578780 CUX2O14529 1486 aa15.55■□□□□ 0.08
RTTN-202ENST00000578780 ACIN1Q9UKV3 1341 aaKnown RBP15.55■□□□□ 0.08
RTTN-202ENST00000578780 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
RTTN-202ENST00000578780 CEP162Q5TB80 1403 aa15.54■□□□□ 0.08
RTTN-202ENST00000578780 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
RTTN-202ENST00000578780 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
RTTN-202ENST00000578780 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
RTTN-202ENST00000578780 PRXQ9BXM0 1461 aa15.52■□□□□ 0.07
RTTN-202ENST00000578780 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
RTTN-202ENST00000578780 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
RTTN-202ENST00000578780 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
RTTN-202ENST00000578780 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
RTTN-202ENST00000578780 IGF1RP08069 1367 aa15.47■□□□□ 0.07
RTTN-202ENST00000578780 ABCA10Q8WWZ4 1543 aa15.46■□□□□ 0.07
RTTN-202ENST00000578780 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
RTTN-202ENST00000578780 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
RTTN-202ENST00000578780 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
RTTN-202ENST00000578780 CLIP1P30622 1438 aa15.4■□□□□ 0.06
RTTN-202ENST00000578780 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
RTTN-202ENST00000578780 CARMIL1Q5VZK9 1371 aa15.39■□□□□ 0.05
RTTN-202ENST00000578780 RANGAP1P46060 587 aaPredicted RBP15.38■□□□□ 0.05
RTTN-202ENST00000578780 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
RTTN-202ENST00000578780 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
RTTN-202ENST00000578780 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
RTTN-202ENST00000578780 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
RTTN-202ENST00000578780 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
RTTN-202ENST00000578780 WDR62O43379 1518 aa15.31■□□□□ 0.04
RTTN-202ENST00000578780 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
RTTN-202ENST00000578780 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
RTTN-202ENST00000578780 CENPBP07199 599 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms