RNA–Protein interactions for RNA: ENST00000576532.1

CCNE1-206, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-206ENST00000576532 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
CCNE1-206ENST00000576532 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
CCNE1-206ENST00000576532 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
CCNE1-206ENST00000576532 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
CCNE1-206ENST00000576532 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
CCNE1-206ENST00000576532 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
CCNE1-206ENST00000576532 ABCC9O60706 1549 aa20.53■□□□□ 0.88
CCNE1-206ENST00000576532 FOXD1Q16676 465 aa20.4■□□□□ 0.86
CCNE1-206ENST00000576532 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
CCNE1-206ENST00000576532 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
CCNE1-206ENST00000576532 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
CCNE1-206ENST00000576532 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
CCNE1-206ENST00000576532 NACADO15069 1562 aa19.96■□□□□ 0.79
CCNE1-206ENST00000576532 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
CCNE1-206ENST00000576532 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
CCNE1-206ENST00000576532 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
CCNE1-206ENST00000576532 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
CCNE1-206ENST00000576532 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
CCNE1-206ENST00000576532 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
CCNE1-206ENST00000576532 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
CCNE1-206ENST00000576532 MSH5O43196 834 aa19.11■□□□□ 0.65
CCNE1-206ENST00000576532 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
CCNE1-206ENST00000576532 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
CCNE1-206ENST00000576532 ADRA2BP18089 450 aa18.92■□□□□ 0.62
CCNE1-206ENST00000576532 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
CCNE1-206ENST00000576532 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
CCNE1-206ENST00000576532 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
CCNE1-206ENST00000576532 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
CCNE1-206ENST00000576532 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
CCNE1-206ENST00000576532 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
CCNE1-206ENST00000576532 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
CCNE1-206ENST00000576532 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
CCNE1-206ENST00000576532 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
CCNE1-206ENST00000576532 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
CCNE1-206ENST00000576532 NCAPD3P42695 1498 aa18.52■□□□□ 0.55
CCNE1-206ENST00000576532 SMARCA2P51531 1590 aa18.5■□□□□ 0.55
CCNE1-206ENST00000576532 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
CCNE1-206ENST00000576532 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
CCNE1-206ENST00000576532 WIZO95785 1651 aa18.44■□□□□ 0.54
CCNE1-206ENST00000576532 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
CCNE1-206ENST00000576532 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
CCNE1-206ENST00000576532 TOP2AP11388 1531 aaKnown RBP18.32■□□□□ 0.52
CCNE1-206ENST00000576532 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
CCNE1-206ENST00000576532 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
CCNE1-206ENST00000576532 CFTRP13569 1480 aa17.96■□□□□ 0.47
CCNE1-206ENST00000576532 NESP48681 1621 aa17.87■□□□□ 0.45
CCNE1-206ENST00000576532 PDS5BQ9NTI5 1447 aa17.85■□□□□ 0.45
CCNE1-206ENST00000576532 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
CCNE1-206ENST00000576532 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
CCNE1-206ENST00000576532 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
CCNE1-206ENST00000576532 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
CCNE1-206ENST00000576532 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
CCNE1-206ENST00000576532 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
CCNE1-206ENST00000576532 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
CCNE1-206ENST00000576532 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
CCNE1-206ENST00000576532 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
CCNE1-206ENST00000576532 CUX1P39880 1505 aa17.52■□□□□ 0.39
CCNE1-206ENST00000576532 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
CCNE1-206ENST00000576532 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
CCNE1-206ENST00000576532 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
CCNE1-206ENST00000576532 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
CCNE1-206ENST00000576532 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
CCNE1-206ENST00000576532 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
CCNE1-206ENST00000576532 SOGA1O94964 1423 aa17.42■□□□□ 0.38
CCNE1-206ENST00000576532 WDR62O43379 1518 aa17.42■□□□□ 0.38
CCNE1-206ENST00000576532 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
CCNE1-206ENST00000576532 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
CCNE1-206ENST00000576532 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
CCNE1-206ENST00000576532 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
CCNE1-206ENST00000576532 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
CCNE1-206ENST00000576532 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
CCNE1-206ENST00000576532 CUX2O14529 1486 aa17.33■□□□□ 0.37
CCNE1-206ENST00000576532 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
CCNE1-206ENST00000576532 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
CCNE1-206ENST00000576532 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
CCNE1-206ENST00000576532 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
CCNE1-206ENST00000576532 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
CCNE1-206ENST00000576532 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
CCNE1-206ENST00000576532 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
CCNE1-206ENST00000576532 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
CCNE1-206ENST00000576532 EEA1Q15075 1411 aa17.22■□□□□ 0.35
CCNE1-206ENST00000576532 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
CCNE1-206ENST00000576532 AQRO60306 1485 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCNE1-206ENST00000576532 IGF1RP08069 1367 aa17.2■□□□□ 0.34
CCNE1-206ENST00000576532 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
CCNE1-206ENST00000576532 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
CCNE1-206ENST00000576532 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
CCNE1-206ENST00000576532 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
CCNE1-206ENST00000576532 CARMIL1Q5VZK9 1371 aa17.09■□□□□ 0.33
CCNE1-206ENST00000576532 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
CCNE1-206ENST00000576532 LOC105371045A0A1W2PR82 267 aa17.05■□□□□ 0.32
CCNE1-206ENST00000576532 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
CCNE1-206ENST00000576532 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
CCNE1-206ENST00000576532 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
CCNE1-206ENST00000576532 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
CCNE1-206ENST00000576532 PRXQ9BXM0 1461 aa17.02■□□□□ 0.32
CCNE1-206ENST00000576532 FBLN2P98095 1184 aa17.02■□□□□ 0.32
CCNE1-206ENST00000576532 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.31
CCNE1-206ENST00000576532 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
CCNE1-206ENST00000576532 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms