RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
CACNA1A-203ENST00000573891 AEBP2Q6ZN18 517 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-203ENST00000573891 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
CACNA1A-203ENST00000573891 ABCC9O60706 1549 aa13.85□□□□□ -0.19
CACNA1A-203ENST00000573891 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-203ENST00000573891 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
CACNA1A-203ENST00000573891 SENP3Q9H4L4 574 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-203ENST00000573891 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
CACNA1A-203ENST00000573891 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
CACNA1A-203ENST00000573891 NACADO15069 1562 aa13.04□□□□□ -0.32
CACNA1A-203ENST00000573891 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
CACNA1A-203ENST00000573891 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
CACNA1A-203ENST00000573891 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNA1A-203ENST00000573891 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
CACNA1A-203ENST00000573891 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
CACNA1A-203ENST00000573891 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
CACNA1A-203ENST00000573891 ZCCHC6Q5VYS8 1495 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-203ENST00000573891 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
CACNA1A-203ENST00000573891 SHROOM4Q9ULL8 1493 aa12.63□□□□□ -0.39
CACNA1A-203ENST00000573891 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
CACNA1A-203ENST00000573891 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
CACNA1A-203ENST00000573891 CC2D2AQ9P2K1 1620 aa12.5□□□□□ -0.41
CACNA1A-203ENST00000573891 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-203ENST00000573891 FOXD1Q16676 465 aa12.31□□□□□ -0.44
CACNA1A-203ENST00000573891 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
CACNA1A-203ENST00000573891 ADRA2BP18089 450 aa12.11□□□□□ -0.47
CACNA1A-203ENST00000573891 NCAPD3P42695 1498 aa12.07□□□□□ -0.48
CACNA1A-203ENST00000573891 CUX2O14529 1486 aa12.01□□□□□ -0.49
CACNA1A-203ENST00000573891 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
CACNA1A-203ENST00000573891 KCNA4P22459 653 aa11.98□□□□□ -0.49
CACNA1A-203ENST00000573891 ERCC6Q03468 1493 aa11.96□□□□□ -0.49
CACNA1A-203ENST00000573891 HMGXB3Q12766 1538 aa11.96□□□□□ -0.5
CACNA1A-203ENST00000573891 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
CACNA1A-203ENST00000573891 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
CACNA1A-203ENST00000573891 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
CACNA1A-203ENST00000573891 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
CACNA1A-203ENST00000573891 NESP48681 1621 aa11.87□□□□□ -0.51
CACNA1A-203ENST00000573891 BAZ1AQ9NRL2 1556 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-203ENST00000573891 BAZ1BQ9UIG0 1483 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-203ENST00000573891 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
CACNA1A-203ENST00000573891 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
CACNA1A-203ENST00000573891 THOC2Q8NI27 1593 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-203ENST00000573891 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
CACNA1A-203ENST00000573891 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
CACNA1A-203ENST00000573891 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
CACNA1A-203ENST00000573891 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
CACNA1A-203ENST00000573891 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
CACNA1A-203ENST00000573891 WDR62O43379 1518 aa11.61□□□□□ -0.55
CACNA1A-203ENST00000573891 WIZO95785 1651 aa11.59□□□□□ -0.55
CACNA1A-203ENST00000573891 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
CACNA1A-203ENST00000573891 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
CACNA1A-203ENST00000573891 CFTRP13569 1480 aa11.53□□□□□ -0.56
CACNA1A-203ENST00000573891 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
CACNA1A-203ENST00000573891 MSH5O43196 834 aa11.51□□□□□ -0.57
CACNA1A-203ENST00000573891 RSF1Q96T23 1441 aaPredicted RBP11.51□□□□□ -0.57
CACNA1A-203ENST00000573891 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-203ENST00000573891 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
CACNA1A-203ENST00000573891 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-203ENST00000573891 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
CACNA1A-203ENST00000573891 PIAS4Q8N2W9 510 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-203ENST00000573891 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
CACNA1A-203ENST00000573891 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
CACNA1A-203ENST00000573891 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
CACNA1A-203ENST00000573891 IFT140Q96RY7 1462 aa11.33□□□□□ -0.6
CACNA1A-203ENST00000573891 PRDM2Q13029 1718 aa11.33□□□□□ -0.6
CACNA1A-203ENST00000573891 ZNF608Q9ULD9 1512 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-203ENST00000573891 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-203ENST00000573891 TOPBP1Q92547 1522 aa11.31□□□□□ -0.6
CACNA1A-203ENST00000573891 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
CACNA1A-203ENST00000573891 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
CACNA1A-203ENST00000573891 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
CACNA1A-203ENST00000573891 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
CACNA1A-203ENST00000573891 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
CACNA1A-203ENST00000573891 DNMBPQ6XZF7 1577 aa11.25□□□□□ -0.61
CACNA1A-203ENST00000573891 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-203ENST00000573891 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
CACNA1A-203ENST00000573891 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-203ENST00000573891 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
CACNA1A-203ENST00000573891 AQRO60306 1485 aaKnown RBP eCLIP11.2□□□□□ -0.62
CACNA1A-203ENST00000573891 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-203ENST00000573891 CYB5RLQ6IPT4 315 aa11.15□□□□□ -0.62
CACNA1A-203ENST00000573891 ARAP1Q96P48 1450 aa11.14□□□□□ -0.63
CACNA1A-203ENST00000573891 CHD1O14646 1710 aa11.14□□□□□ -0.63
CACNA1A-203ENST00000573891 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
CACNA1A-203ENST00000573891 SOGA1O94964 1423 aa11.12□□□□□ -0.63
CACNA1A-203ENST00000573891 TDRD9Q8NDG6 1382 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-203ENST00000573891 FBLN2P98095 1184 aa11.11□□□□□ -0.63
CACNA1A-203ENST00000573891 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
CACNA1A-203ENST00000573891 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
CACNA1A-203ENST00000573891 SNAPC4Q5SXM2 1469 aa11.08□□□□□ -0.64
CACNA1A-203ENST00000573891 ZBTB22O15209 634 aa11.07□□□□□ -0.64
CACNA1A-203ENST00000573891 CUX1P39880 1505 aa11.07□□□□□ -0.64
CACNA1A-203ENST00000573891 CLASP1Q7Z460 1538 aa11.07□□□□□ -0.64
CACNA1A-203ENST00000573891 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-203ENST00000573891 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
CACNA1A-203ENST00000573891 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-203ENST00000573891 SYNJ1O43426 1573 aa11.03□□□□□ -0.64
CACNA1A-203ENST00000573891 CHMP7Q8WUX9 453 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-203ENST00000573891 SYNJ2O15056 1496 aa11.03□□□□□ -0.64
CACNA1A-203ENST00000573891 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms