RNA–Protein interactions for RNA: ENST00000572555.5

TRIM16L-209, Transcript of tripartite motif containing 16 like, humanhuman

TSL 2

Gene TRIM16L, Length 1,809 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16L-209ENST00000572555 NISCHQ9Y2I1 1504 aa25.19■■□□□ 1.62
TRIM16L-209ENST00000572555 CCDC180Q9P1Z9 1646 aa21.79■■□□□ 1.08
TRIM16L-209ENST00000572555 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
TRIM16L-209ENST00000572555 ABCC9O60706 1549 aa21■□□□□ 0.95
TRIM16L-209ENST00000572555 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
TRIM16L-209ENST00000572555 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.92
TRIM16L-209ENST00000572555 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
TRIM16L-209ENST00000572555 MYO15BQ96JP2 1530 aa20.5■□□□□ 0.87
TRIM16L-209ENST00000572555 NACADO15069 1562 aa20.46■□□□□ 0.87
TRIM16L-209ENST00000572555 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
TRIM16L-209ENST00000572555 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
TRIM16L-209ENST00000572555 SCRIBQ14160 1630 aa20.06■□□□□ 0.8
TRIM16L-209ENST00000572555 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
TRIM16L-209ENST00000572555 UNC13AQ9UPW8 1703 aa19.81■□□□□ 0.76
TRIM16L-209ENST00000572555 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
TRIM16L-209ENST00000572555 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
TRIM16L-209ENST00000572555 PABPN1Q86U42 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
TRIM16L-209ENST00000572555 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
TRIM16L-209ENST00000572555 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
TRIM16L-209ENST00000572555 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
TRIM16L-209ENST00000572555 WIZO95785 1651 aa19.4■□□□□ 0.7
TRIM16L-209ENST00000572555 SMARCA4P51532 1647 aa19.27■□□□□ 0.67
TRIM16L-209ENST00000572555 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
TRIM16L-209ENST00000572555 TOP2AP11388 1531 aaKnown RBP19.19■□□□□ 0.66
TRIM16L-209ENST00000572555 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
TRIM16L-209ENST00000572555 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
TRIM16L-209ENST00000572555 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
TRIM16L-209ENST00000572555 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
TRIM16L-209ENST00000572555 CC2D2AQ9P2K1 1620 aa19.02■□□□□ 0.64
TRIM16L-209ENST00000572555 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
TRIM16L-209ENST00000572555 CCDC88BA6NC98 1476 aa18.99■□□□□ 0.63
TRIM16L-209ENST00000572555 HRCP23327 699 aa18.99■□□□□ 0.63
TRIM16L-209ENST00000572555 PCGF6Q9BYE7 350 aa18.97■□□□□ 0.63
TRIM16L-209ENST00000572555 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
TRIM16L-209ENST00000572555 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
TRIM16L-209ENST00000572555 FAM9AQ8IZU1 332 aaPredicted RBP18.85■□□□□ 0.61
TRIM16L-209ENST00000572555 ABCC8Q09428 1581 aa18.83■□□□□ 0.6
TRIM16L-209ENST00000572555 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
TRIM16L-209ENST00000572555 TRIM26Q12899 539 aaPredicted RBP18.79■□□□□ 0.6
TRIM16L-209ENST00000572555 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
TRIM16L-209ENST00000572555 EEA1Q15075 1411 aa18.64■□□□□ 0.57
TRIM16L-209ENST00000572555 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
TRIM16L-209ENST00000572555 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
TRIM16L-209ENST00000572555 SOGA1O94964 1423 aa18.57■□□□□ 0.56
TRIM16L-209ENST00000572555 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
TRIM16L-209ENST00000572555 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
TRIM16L-209ENST00000572555 TNIKQ9UKE5 1360 aa18.47■□□□□ 0.55
TRIM16L-209ENST00000572555 CSRNP3Q8WYN3 585 aa18.44■□□□□ 0.54
TRIM16L-209ENST00000572555 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
TRIM16L-209ENST00000572555 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
TRIM16L-209ENST00000572555 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
TRIM16L-209ENST00000572555 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
TRIM16L-209ENST00000572555 KIF21BO75037 1637 aa18.41■□□□□ 0.54
TRIM16L-209ENST00000572555 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
TRIM16L-209ENST00000572555 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.53
TRIM16L-209ENST00000572555 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
TRIM16L-209ENST00000572555 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
TRIM16L-209ENST00000572555 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
TRIM16L-209ENST00000572555 CFTRP13569 1480 aa18.29■□□□□ 0.52
TRIM16L-209ENST00000572555 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
TRIM16L-209ENST00000572555 UBTFP17480 764 aaKnown RBP18.26■□□□□ 0.51
TRIM16L-209ENST00000572555 NESP48681 1621 aa18.24■□□□□ 0.51
TRIM16L-209ENST00000572555 PDS5BQ9NTI5 1447 aa18.22■□□□□ 0.51
TRIM16L-209ENST00000572555 CUX1P39880 1505 aa18.2■□□□□ 0.5
TRIM16L-209ENST00000572555 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
TRIM16L-209ENST00000572555 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
TRIM16L-209ENST00000572555 CLIP1P30622 1438 aa18.15■□□□□ 0.5
TRIM16L-209ENST00000572555 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
TRIM16L-209ENST00000572555 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
TRIM16L-209ENST00000572555 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
TRIM16L-209ENST00000572555 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
TRIM16L-209ENST00000572555 KIF27Q86VH2 1401 aa18.05■□□□□ 0.48
TRIM16L-209ENST00000572555 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
TRIM16L-209ENST00000572555 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
TRIM16L-209ENST00000572555 TTBK1Q5TCY1 1321 aaPredicted RBP17.95■□□□□ 0.46
TRIM16L-209ENST00000572555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
TRIM16L-209ENST00000572555 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
TRIM16L-209ENST00000572555 CCER1Q8TC90 406 aaPredicted RBP17.93■□□□□ 0.46
TRIM16L-209ENST00000572555 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
TRIM16L-209ENST00000572555 WDR62O43379 1518 aa17.91■□□□□ 0.46
TRIM16L-209ENST00000572555 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.46
TRIM16L-209ENST00000572555 CUX2O14529 1486 aa17.89■□□□□ 0.45
TRIM16L-209ENST00000572555 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
TRIM16L-209ENST00000572555 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
TRIM16L-209ENST00000572555 APLP2Q06481 763 aa17.84■□□□□ 0.45
TRIM16L-209ENST00000572555 TOPBP1Q92547 1522 aa17.83■□□□□ 0.44
TRIM16L-209ENST00000572555 IGF1RP08069 1367 aa17.82■□□□□ 0.44
TRIM16L-209ENST00000572555 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
TRIM16L-209ENST00000572555 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
TRIM16L-209ENST00000572555 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
TRIM16L-209ENST00000572555 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
TRIM16L-209ENST00000572555 POLA1P09884 1462 aaPredicted RBP17.72■□□□□ 0.43
TRIM16L-209ENST00000572555 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
TRIM16L-209ENST00000572555 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
TRIM16L-209ENST00000572555 CUL7Q14999 1698 aa17.69■□□□□ 0.42
TRIM16L-209ENST00000572555 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
TRIM16L-209ENST00000572555 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
TRIM16L-209ENST00000572555 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
TRIM16L-209ENST00000572555 RRBP1Q9P2E9 1410 aaKnown RBP17.65■□□□□ 0.42
TRIM16L-209ENST00000572555 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms