RNA–Protein interactions for RNA: ENST00000571759.1

VAC14-212, Transcript of Vac14, PIKFYVE complex component, humanhuman

Gene VAC14, Length 3,609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-212ENST00000571759 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.32
VAC14-212ENST00000571759 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
VAC14-212ENST00000571759 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
VAC14-212ENST00000571759 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
VAC14-212ENST00000571759 ABCC9O60706 1549 aa19.72■□□□□ 0.75
VAC14-212ENST00000571759 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
VAC14-212ENST00000571759 ZCCHC6Q5VYS8 1495 aaKnown RBP19.49■□□□□ 0.71
VAC14-212ENST00000571759 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
VAC14-212ENST00000571759 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
VAC14-212ENST00000571759 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
VAC14-212ENST00000571759 NACADO15069 1562 aa18.62■□□□□ 0.57
VAC14-212ENST00000571759 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
VAC14-212ENST00000571759 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
VAC14-212ENST00000571759 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
VAC14-212ENST00000571759 MYO15BQ96JP2 1530 aa18.4■□□□□ 0.54
VAC14-212ENST00000571759 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
VAC14-212ENST00000571759 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
VAC14-212ENST00000571759 FAM9AQ8IZU1 332 aaPredicted RBP18.3■□□□□ 0.52
VAC14-212ENST00000571759 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
VAC14-212ENST00000571759 UNC13AQ9UPW8 1703 aa18.11■□□□□ 0.49
VAC14-212ENST00000571759 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
VAC14-212ENST00000571759 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
VAC14-212ENST00000571759 WIZO95785 1651 aa18.09■□□□□ 0.49
VAC14-212ENST00000571759 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
VAC14-212ENST00000571759 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
VAC14-212ENST00000571759 SMARCA4P51532 1647 aa17.84■□□□□ 0.45
VAC14-212ENST00000571759 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
VAC14-212ENST00000571759 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
VAC14-212ENST00000571759 RANGAP1P46060 587 aaPredicted RBP17.72■□□□□ 0.43
VAC14-212ENST00000571759 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
VAC14-212ENST00000571759 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
VAC14-212ENST00000571759 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
VAC14-212ENST00000571759 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
VAC14-212ENST00000571759 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
VAC14-212ENST00000571759 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
VAC14-212ENST00000571759 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
VAC14-212ENST00000571759 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
VAC14-212ENST00000571759 UBTFP17480 764 aaKnown RBP17.48■□□□□ 0.39
VAC14-212ENST00000571759 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
VAC14-212ENST00000571759 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
VAC14-212ENST00000571759 SOGA1O94964 1423 aa17.4■□□□□ 0.38
VAC14-212ENST00000571759 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
VAC14-212ENST00000571759 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
VAC14-212ENST00000571759 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
VAC14-212ENST00000571759 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
VAC14-212ENST00000571759 NESP48681 1621 aa17.28■□□□□ 0.36
VAC14-212ENST00000571759 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
VAC14-212ENST00000571759 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
VAC14-212ENST00000571759 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
VAC14-212ENST00000571759 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
VAC14-212ENST00000571759 CFTRP13569 1480 aa17.07■□□□□ 0.32
VAC14-212ENST00000571759 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
VAC14-212ENST00000571759 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
VAC14-212ENST00000571759 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.31
VAC14-212ENST00000571759 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
VAC14-212ENST00000571759 CUX1P39880 1505 aa16.98■□□□□ 0.31
VAC14-212ENST00000571759 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
VAC14-212ENST00000571759 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
VAC14-212ENST00000571759 CUX2O14529 1486 aa16.94■□□□□ 0.3
VAC14-212ENST00000571759 FBLN2P98095 1184 aa16.94■□□□□ 0.3
VAC14-212ENST00000571759 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
VAC14-212ENST00000571759 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
VAC14-212ENST00000571759 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
VAC14-212ENST00000571759 APLP2Q06481 763 aa16.88■□□□□ 0.29
VAC14-212ENST00000571759 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
VAC14-212ENST00000571759 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
VAC14-212ENST00000571759 KIF27Q86VH2 1401 aa16.86■□□□□ 0.29
VAC14-212ENST00000571759 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.29
VAC14-212ENST00000571759 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.29
VAC14-212ENST00000571759 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
VAC14-212ENST00000571759 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
VAC14-212ENST00000571759 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
VAC14-212ENST00000571759 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
VAC14-212ENST00000571759 IGF1RP08069 1367 aa16.78■□□□□ 0.28
VAC14-212ENST00000571759 EEA1Q15075 1411 aa16.78■□□□□ 0.28
VAC14-212ENST00000571759 CLIP1P30622 1438 aa16.77■□□□□ 0.28
VAC14-212ENST00000571759 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.27
VAC14-212ENST00000571759 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
VAC14-212ENST00000571759 ITGAEP38570 1179 aa16.75■□□□□ 0.27
VAC14-212ENST00000571759 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
VAC14-212ENST00000571759 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
VAC14-212ENST00000571759 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
VAC14-212ENST00000571759 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.27
VAC14-212ENST00000571759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
VAC14-212ENST00000571759 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
VAC14-212ENST00000571759 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
VAC14-212ENST00000571759 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
VAC14-212ENST00000571759 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
VAC14-212ENST00000571759 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
VAC14-212ENST00000571759 PRXQ9BXM0 1461 aa16.59■□□□□ 0.25
VAC14-212ENST00000571759 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
VAC14-212ENST00000571759 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.24
VAC14-212ENST00000571759 HRCP23327 699 aa16.57■□□□□ 0.24
VAC14-212ENST00000571759 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
VAC14-212ENST00000571759 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
VAC14-212ENST00000571759 MYT1Q01538 1121 aa16.51■□□□□ 0.23
VAC14-212ENST00000571759 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
VAC14-212ENST00000571759 FHOD3Q2V2M9 1422 aa16.49■□□□□ 0.23
VAC14-212ENST00000571759 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
VAC14-212ENST00000571759 KIF21BO75037 1637 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms