RNA–Protein interactions for RNA: ENST00000571259.5

BCAR4-202, Transcript of breast cancer anti-estrogen resistance 4, humanhuman

TSL 2

Gene BCAR4, Length 669 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR4-202ENST00000571259 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
BCAR4-202ENST00000571259 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
BCAR4-202ENST00000571259 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
BCAR4-202ENST00000571259 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
BCAR4-202ENST00000571259 FOXD1Q16676 465 aa15.42■□□□□ 0.06
BCAR4-202ENST00000571259 NISCHQ9Y2I1 1504 aa15.01□□□□□ -0.01
BCAR4-202ENST00000571259 POTEDQ86YR6 584 aa14.77□□□□□ -0.05
BCAR4-202ENST00000571259 MSH5O43196 834 aa14.6□□□□□ -0.07
BCAR4-202ENST00000571259 PIAS4Q8N2W9 510 aaPredicted RBP14.37□□□□□ -0.11
BCAR4-202ENST00000571259 ABCC9O60706 1549 aa14.33□□□□□ -0.12
BCAR4-202ENST00000571259 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
BCAR4-202ENST00000571259 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
BCAR4-202ENST00000571259 ADRA2BP18089 450 aa14.11□□□□□ -0.15
BCAR4-202ENST00000571259 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
BCAR4-202ENST00000571259 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
BCAR4-202ENST00000571259 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
BCAR4-202ENST00000571259 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
BCAR4-202ENST00000571259 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
BCAR4-202ENST00000571259 NACADO15069 1562 aa13.2□□□□□ -0.3
BCAR4-202ENST00000571259 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
BCAR4-202ENST00000571259 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
BCAR4-202ENST00000571259 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
BCAR4-202ENST00000571259 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.33
BCAR4-202ENST00000571259 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
BCAR4-202ENST00000571259 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
BCAR4-202ENST00000571259 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
BCAR4-202ENST00000571259 CC2D2AQ9P2K1 1620 aa12.93□□□□□ -0.34
BCAR4-202ENST00000571259 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
BCAR4-202ENST00000571259 MYO15BQ96JP2 1530 aa12.82□□□□□ -0.36
BCAR4-202ENST00000571259 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
BCAR4-202ENST00000571259 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
BCAR4-202ENST00000571259 CUX2O14529 1486 aa12.69□□□□□ -0.38
BCAR4-202ENST00000571259 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
BCAR4-202ENST00000571259 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
BCAR4-202ENST00000571259 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
BCAR4-202ENST00000571259 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
BCAR4-202ENST00000571259 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.41
BCAR4-202ENST00000571259 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
BCAR4-202ENST00000571259 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
BCAR4-202ENST00000571259 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
BCAR4-202ENST00000571259 ZCCHC6Q5VYS8 1495 aaKnown RBP12.3□□□□□ -0.44
BCAR4-202ENST00000571259 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
BCAR4-202ENST00000571259 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
BCAR4-202ENST00000571259 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
BCAR4-202ENST00000571259 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
BCAR4-202ENST00000571259 THOC2Q8NI27 1593 aaKnown RBP12.14□□□□□ -0.47
BCAR4-202ENST00000571259 NESP48681 1621 aa12.1□□□□□ -0.47
BCAR4-202ENST00000571259 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
BCAR4-202ENST00000571259 SMARCA2P51531 1590 aa12.03□□□□□ -0.48
BCAR4-202ENST00000571259 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
BCAR4-202ENST00000571259 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
BCAR4-202ENST00000571259 KCNA4P22459 653 aa12□□□□□ -0.49
BCAR4-202ENST00000571259 OSCARQ8IYS5 282 aa12□□□□□ -0.49
BCAR4-202ENST00000571259 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
BCAR4-202ENST00000571259 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
BCAR4-202ENST00000571259 KIF21AQ7Z4S6 1674 aa11.96□□□□□ -0.5
BCAR4-202ENST00000571259 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
BCAR4-202ENST00000571259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.92□□□□□ -0.5
BCAR4-202ENST00000571259 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
BCAR4-202ENST00000571259 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
BCAR4-202ENST00000571259 WDR62O43379 1518 aa11.86□□□□□ -0.51
BCAR4-202ENST00000571259 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
BCAR4-202ENST00000571259 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
BCAR4-202ENST00000571259 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
BCAR4-202ENST00000571259 TRHP20396 242 aaPredicted RBP11.84□□□□□ -0.51
BCAR4-202ENST00000571259 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
BCAR4-202ENST00000571259 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
BCAR4-202ENST00000571259 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
BCAR4-202ENST00000571259 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
BCAR4-202ENST00000571259 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
BCAR4-202ENST00000571259 CYB5RLQ6IPT4 315 aa11.72□□□□□ -0.53
BCAR4-202ENST00000571259 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
BCAR4-202ENST00000571259 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
BCAR4-202ENST00000571259 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
BCAR4-202ENST00000571259 SLC4A1APQ9BWU0 796 aaKnown RBP11.61□□□□□ -0.55
BCAR4-202ENST00000571259 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
BCAR4-202ENST00000571259 CAPN15O75808 1086 aa11.56□□□□□ -0.56
BCAR4-202ENST00000571259 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
BCAR4-202ENST00000571259 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
BCAR4-202ENST00000571259 POTEHQ6S545 545 aa11.53□□□□□ -0.56
BCAR4-202ENST00000571259 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
BCAR4-202ENST00000571259 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
BCAR4-202ENST00000571259 MROH2BQ7Z745 1585 aa11.51□□□□□ -0.57
BCAR4-202ENST00000571259 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
BCAR4-202ENST00000571259 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
BCAR4-202ENST00000571259 DSG3P32926 999 aa11.49□□□□□ -0.57
BCAR4-202ENST00000571259 CFTRP13569 1480 aa11.49□□□□□ -0.57
BCAR4-202ENST00000571259 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
BCAR4-202ENST00000571259 CHD1O14646 1710 aa11.45□□□□□ -0.58
BCAR4-202ENST00000571259 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
BCAR4-202ENST00000571259 FBLN2P98095 1184 aa11.41□□□□□ -0.58
BCAR4-202ENST00000571259 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
BCAR4-202ENST00000571259 WIZO95785 1651 aa11.35□□□□□ -0.59
BCAR4-202ENST00000571259 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
BCAR4-202ENST00000571259 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
BCAR4-202ENST00000571259 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
BCAR4-202ENST00000571259 AQRO60306 1485 aaKnown RBP eCLIP11.31□□□□□ -0.6
BCAR4-202ENST00000571259 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
BCAR4-202ENST00000571259 SYNJ1O43426 1573 aa11.3□□□□□ -0.6
BCAR4-202ENST00000571259 APLP2Q06481 763 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms