RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-223ENST00000569784 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
SCAPER-223ENST00000569784 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
SCAPER-223ENST00000569784 NISCHQ9Y2I1 1504 aa20.95■□□□□ 0.94
SCAPER-223ENST00000569784 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
SCAPER-223ENST00000569784 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
SCAPER-223ENST00000569784 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.61
SCAPER-223ENST00000569784 ABCC9O60706 1549 aa18.82■□□□□ 0.6
SCAPER-223ENST00000569784 FOXD1Q16676 465 aa18.31■□□□□ 0.52
SCAPER-223ENST00000569784 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
SCAPER-223ENST00000569784 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
SCAPER-223ENST00000569784 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
SCAPER-223ENST00000569784 NACADO15069 1562 aa17.78■□□□□ 0.44
SCAPER-223ENST00000569784 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
SCAPER-223ENST00000569784 ADRA2BP18089 450 aa17.62■□□□□ 0.41
SCAPER-223ENST00000569784 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
SCAPER-223ENST00000569784 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
SCAPER-223ENST00000569784 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
SCAPER-223ENST00000569784 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
SCAPER-223ENST00000569784 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
SCAPER-223ENST00000569784 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
SCAPER-223ENST00000569784 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
SCAPER-223ENST00000569784 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
SCAPER-223ENST00000569784 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
SCAPER-223ENST00000569784 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
SCAPER-223ENST00000569784 CC2D2AQ9P2K1 1620 aa16.98■□□□□ 0.31
SCAPER-223ENST00000569784 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
SCAPER-223ENST00000569784 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
SCAPER-223ENST00000569784 MSH5O43196 834 aa16.74■□□□□ 0.27
SCAPER-223ENST00000569784 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
SCAPER-223ENST00000569784 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
SCAPER-223ENST00000569784 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
SCAPER-223ENST00000569784 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
SCAPER-223ENST00000569784 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.2
SCAPER-223ENST00000569784 BAZ1AQ9NRL2 1556 aaPredicted RBP16.32■□□□□ 0.2
SCAPER-223ENST00000569784 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
SCAPER-223ENST00000569784 BAZ1BQ9UIG0 1483 aaKnown RBP16.26■□□□□ 0.19
SCAPER-223ENST00000569784 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
SCAPER-223ENST00000569784 CUX2O14529 1486 aa16.17■□□□□ 0.18
SCAPER-223ENST00000569784 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
SCAPER-223ENST00000569784 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
SCAPER-223ENST00000569784 NESP48681 1621 aa16.12■□□□□ 0.17
SCAPER-223ENST00000569784 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
SCAPER-223ENST00000569784 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
SCAPER-223ENST00000569784 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
SCAPER-223ENST00000569784 WIZO95785 1651 aa16.01■□□□□ 0.15
SCAPER-223ENST00000569784 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
SCAPER-223ENST00000569784 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
SCAPER-223ENST00000569784 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
SCAPER-223ENST00000569784 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
SCAPER-223ENST00000569784 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
SCAPER-223ENST00000569784 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
SCAPER-223ENST00000569784 KCNA4P22459 653 aa15.83■□□□□ 0.12
SCAPER-223ENST00000569784 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
SCAPER-223ENST00000569784 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
SCAPER-223ENST00000569784 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
SCAPER-223ENST00000569784 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
SCAPER-223ENST00000569784 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
SCAPER-223ENST00000569784 WDR62O43379 1518 aa15.73■□□□□ 0.11
SCAPER-223ENST00000569784 CFTRP13569 1480 aa15.7■□□□□ 0.1
SCAPER-223ENST00000569784 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
SCAPER-223ENST00000569784 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
SCAPER-223ENST00000569784 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
SCAPER-223ENST00000569784 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
SCAPER-223ENST00000569784 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
SCAPER-223ENST00000569784 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
SCAPER-223ENST00000569784 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
SCAPER-223ENST00000569784 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
SCAPER-223ENST00000569784 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
SCAPER-223ENST00000569784 ABCC8Q09428 1581 aa15.46■□□□□ 0.07
SCAPER-223ENST00000569784 IFT140Q96RY7 1462 aa15.46■□□□□ 0.06
SCAPER-223ENST00000569784 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
SCAPER-223ENST00000569784 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
SCAPER-223ENST00000569784 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
SCAPER-223ENST00000569784 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
SCAPER-223ENST00000569784 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
SCAPER-223ENST00000569784 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
SCAPER-223ENST00000569784 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
SCAPER-223ENST00000569784 FBLN2P98095 1184 aa15.34■□□□□ 0.05
SCAPER-223ENST00000569784 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCAPER-223ENST00000569784 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.04
SCAPER-223ENST00000569784 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.03
SCAPER-223ENST00000569784 SOGA1O94964 1423 aa15.26■□□□□ 0.03
SCAPER-223ENST00000569784 CHD1O14646 1710 aa15.26■□□□□ 0.03
SCAPER-223ENST00000569784 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
SCAPER-223ENST00000569784 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
SCAPER-223ENST00000569784 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
SCAPER-223ENST00000569784 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
SCAPER-223ENST00000569784 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
SCAPER-223ENST00000569784 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.02
SCAPER-223ENST00000569784 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
SCAPER-223ENST00000569784 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
SCAPER-223ENST00000569784 CUX1P39880 1505 aa15.17■□□□□ 0.02
SCAPER-223ENST00000569784 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
SCAPER-223ENST00000569784 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
SCAPER-223ENST00000569784 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
SCAPER-223ENST00000569784 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
SCAPER-223ENST00000569784 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
SCAPER-223ENST00000569784 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
SCAPER-223ENST00000569784 MAGI1Q96QZ7 1491 aaPredicted RBP15.09■□□□□ 0.01
SCAPER-223ENST00000569784 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms