RNA–Protein interactions for RNA: ENST00000569737.1

AP003774.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003774.2, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003774.2-201ENST00000569737 AEBP2Q6ZN18 517 aaPredicted RBP17.33■□□□□ 0.36
AP003774.2-201ENST00000569737 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
AP003774.2-201ENST00000569737 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
AP003774.2-201ENST00000569737 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
AP003774.2-201ENST00000569737 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
AP003774.2-201ENST00000569737 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.19
AP003774.2-201ENST00000569737 ABCC9O60706 1549 aa13.78□□□□□ -0.2
AP003774.2-201ENST00000569737 FOXD1Q16676 465 aa13.75□□□□□ -0.21
AP003774.2-201ENST00000569737 PLPPR3Q6T4P5 718 aa13.32□□□□□ -0.28
AP003774.2-201ENST00000569737 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
AP003774.2-201ENST00000569737 DCAF8L2P0C7V8 631 aa13.13□□□□□ -0.31
AP003774.2-201ENST00000569737 NACADO15069 1562 aa13.12□□□□□ -0.31
AP003774.2-201ENST00000569737 MYO15BQ96JP2 1530 aa12.95□□□□□ -0.34
AP003774.2-201ENST00000569737 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
AP003774.2-201ENST00000569737 ADRA2BP18089 450 aa12.91□□□□□ -0.34
AP003774.2-201ENST00000569737 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
AP003774.2-201ENST00000569737 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
AP003774.2-201ENST00000569737 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
AP003774.2-201ENST00000569737 MSH5O43196 834 aa12.81□□□□□ -0.36
AP003774.2-201ENST00000569737 DCAF1Q9Y4B6 1507 aa12.81□□□□□ -0.36
AP003774.2-201ENST00000569737 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
AP003774.2-201ENST00000569737 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
AP003774.2-201ENST00000569737 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
AP003774.2-201ENST00000569737 BICRAQ9NZM4 1560 aa12.66□□□□□ -0.38
AP003774.2-201ENST00000569737 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
AP003774.2-201ENST00000569737 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
AP003774.2-201ENST00000569737 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
AP003774.2-201ENST00000569737 CECR2Q9BXF3 1484 aa12.42□□□□□ -0.42
AP003774.2-201ENST00000569737 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
AP003774.2-201ENST00000569737 SMARCA2P51531 1590 aa12.09□□□□□ -0.47
AP003774.2-201ENST00000569737 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
AP003774.2-201ENST00000569737 NCAPD3P42695 1498 aa12.07□□□□□ -0.48
AP003774.2-201ENST00000569737 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
AP003774.2-201ENST00000569737 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
AP003774.2-201ENST00000569737 HMGXB3Q12766 1538 aa12.02□□□□□ -0.48
AP003774.2-201ENST00000569737 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
AP003774.2-201ENST00000569737 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
AP003774.2-201ENST00000569737 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
AP003774.2-201ENST00000569737 CUX2O14529 1486 aa11.9□□□□□ -0.5
AP003774.2-201ENST00000569737 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
AP003774.2-201ENST00000569737 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
AP003774.2-201ENST00000569737 SCAF1Q9H7N4 1312 aaKnown RBP11.83□□□□□ -0.52
AP003774.2-201ENST00000569737 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
AP003774.2-201ENST00000569737 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
AP003774.2-201ENST00000569737 NESP48681 1621 aa11.79□□□□□ -0.52
AP003774.2-201ENST00000569737 WIZO95785 1651 aa11.75□□□□□ -0.53
AP003774.2-201ENST00000569737 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
AP003774.2-201ENST00000569737 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
AP003774.2-201ENST00000569737 DNAJC5Q9H3Z4 198 aa11.71□□□□□ -0.53
AP003774.2-201ENST00000569737 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
AP003774.2-201ENST00000569737 THOC2Q8NI27 1593 aaKnown RBP11.69□□□□□ -0.54
AP003774.2-201ENST00000569737 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
AP003774.2-201ENST00000569737 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
AP003774.2-201ENST00000569737 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
AP003774.2-201ENST00000569737 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
AP003774.2-201ENST00000569737 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
AP003774.2-201ENST00000569737 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
AP003774.2-201ENST00000569737 CFTRP13569 1480 aa11.59□□□□□ -0.55
AP003774.2-201ENST00000569737 WDR62O43379 1518 aa11.59□□□□□ -0.55
AP003774.2-201ENST00000569737 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
AP003774.2-201ENST00000569737 CCDC88BA6NC98 1476 aa11.49□□□□□ -0.57
AP003774.2-201ENST00000569737 ABCC8Q09428 1581 aa11.46□□□□□ -0.57
AP003774.2-201ENST00000569737 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
AP003774.2-201ENST00000569737 URB2Q14146 1524 aaKnown RBP11.44□□□□□ -0.58
AP003774.2-201ENST00000569737 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
AP003774.2-201ENST00000569737 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
AP003774.2-201ENST00000569737 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
AP003774.2-201ENST00000569737 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
AP003774.2-201ENST00000569737 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
AP003774.2-201ENST00000569737 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
AP003774.2-201ENST00000569737 SUPT5HO00267 1087 aaKnown RBP11.32□□□□□ -0.6
AP003774.2-201ENST00000569737 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
AP003774.2-201ENST00000569737 KCNA4P22459 653 aa11.29□□□□□ -0.6
AP003774.2-201ENST00000569737 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
AP003774.2-201ENST00000569737 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
AP003774.2-201ENST00000569737 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.61
AP003774.2-201ENST00000569737 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
AP003774.2-201ENST00000569737 FBLN2P98095 1184 aa11.25□□□□□ -0.61
AP003774.2-201ENST00000569737 SOGA1O94964 1423 aa11.25□□□□□ -0.61
AP003774.2-201ENST00000569737 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
AP003774.2-201ENST00000569737 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
AP003774.2-201ENST00000569737 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
AP003774.2-201ENST00000569737 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.61
AP003774.2-201ENST00000569737 FGD5Q6ZNL6 1462 aa11.21□□□□□ -0.61
AP003774.2-201ENST00000569737 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
AP003774.2-201ENST00000569737 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
AP003774.2-201ENST00000569737 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
AP003774.2-201ENST00000569737 CUX1P39880 1505 aa11.17□□□□□ -0.62
AP003774.2-201ENST00000569737 CHD1O14646 1710 aa11.16□□□□□ -0.62
AP003774.2-201ENST00000569737 GRIN2BQ13224 1484 aa11.16□□□□□ -0.62
AP003774.2-201ENST00000569737 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
AP003774.2-201ENST00000569737 SNAPC4Q5SXM2 1469 aa11.15□□□□□ -0.62
AP003774.2-201ENST00000569737 RIMBP3CA6NJZ7 1639 aa11.15□□□□□ -0.62
AP003774.2-201ENST00000569737 RIMBP3BA6NNM3 1639 aa11.15□□□□□ -0.62
AP003774.2-201ENST00000569737 RIMBP3Q9UFD9 1639 aa11.15□□□□□ -0.62
AP003774.2-201ENST00000569737 SYNJ1O43426 1573 aa11.14□□□□□ -0.63
AP003774.2-201ENST00000569737 ARHGEF11O15085 1522 aa11.14□□□□□ -0.63
AP003774.2-201ENST00000569737 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
AP003774.2-201ENST00000569737 NPM3O75607 178 aaKnown RBP11.12□□□□□ -0.63
AP003774.2-201ENST00000569737 GAPVD1Q14C86 1478 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms