RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
BBS4-214ENST00000568535 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
BBS4-214ENST00000568535 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
BBS4-214ENST00000568535 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
BBS4-214ENST00000568535 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
BBS4-214ENST00000568535 ABCC9O60706 1549 aa15.5■□□□□ 0.07
BBS4-214ENST00000568535 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
BBS4-214ENST00000568535 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
BBS4-214ENST00000568535 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
BBS4-214ENST00000568535 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
BBS4-214ENST00000568535 NACADO15069 1562 aa15.16■□□□□ 0.02
BBS4-214ENST00000568535 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
BBS4-214ENST00000568535 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
BBS4-214ENST00000568535 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
BBS4-214ENST00000568535 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
BBS4-214ENST00000568535 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
BBS4-214ENST00000568535 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
BBS4-214ENST00000568535 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
BBS4-214ENST00000568535 BICRAQ9NZM4 1560 aa14.48□□□□□ -0.09
BBS4-214ENST00000568535 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
BBS4-214ENST00000568535 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
BBS4-214ENST00000568535 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
BBS4-214ENST00000568535 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
BBS4-214ENST00000568535 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
BBS4-214ENST00000568535 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
BBS4-214ENST00000568535 WIZO95785 1651 aa14.15□□□□□ -0.14
BBS4-214ENST00000568535 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
BBS4-214ENST00000568535 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
BBS4-214ENST00000568535 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
BBS4-214ENST00000568535 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
BBS4-214ENST00000568535 TOP2AP11388 1531 aaKnown RBP14.07□□□□□ -0.16
BBS4-214ENST00000568535 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
BBS4-214ENST00000568535 NCAPD3P42695 1498 aa14□□□□□ -0.17
BBS4-214ENST00000568535 SENP3Q9H4L4 574 aaPredicted RBP13.97□□□□□ -0.17
BBS4-214ENST00000568535 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
BBS4-214ENST00000568535 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
BBS4-214ENST00000568535 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
BBS4-214ENST00000568535 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
BBS4-214ENST00000568535 CUX2O14529 1486 aa13.7□□□□□ -0.22
BBS4-214ENST00000568535 CADPSQ9ULU8 1353 aa13.65□□□□□ -0.22
BBS4-214ENST00000568535 CFTRP13569 1480 aa13.65□□□□□ -0.22
BBS4-214ENST00000568535 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
BBS4-214ENST00000568535 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
BBS4-214ENST00000568535 LAMC3Q9Y6N6 1575 aa13.51□□□□□ -0.25
BBS4-214ENST00000568535 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
BBS4-214ENST00000568535 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
BBS4-214ENST00000568535 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
BBS4-214ENST00000568535 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
BBS4-214ENST00000568535 NESP48681 1621 aa13.43□□□□□ -0.26
BBS4-214ENST00000568535 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
BBS4-214ENST00000568535 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
BBS4-214ENST00000568535 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
BBS4-214ENST00000568535 EEA1Q15075 1411 aa13.41□□□□□ -0.26
BBS4-214ENST00000568535 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
BBS4-214ENST00000568535 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
BBS4-214ENST00000568535 CUX1P39880 1505 aa13.38□□□□□ -0.27
BBS4-214ENST00000568535 SOGA1O94964 1423 aa13.33□□□□□ -0.28
BBS4-214ENST00000568535 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
BBS4-214ENST00000568535 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
BBS4-214ENST00000568535 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
BBS4-214ENST00000568535 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
BBS4-214ENST00000568535 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
BBS4-214ENST00000568535 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
BBS4-214ENST00000568535 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
BBS4-214ENST00000568535 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
BBS4-214ENST00000568535 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
BBS4-214ENST00000568535 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
BBS4-214ENST00000568535 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
BBS4-214ENST00000568535 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
BBS4-214ENST00000568535 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
BBS4-214ENST00000568535 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
BBS4-214ENST00000568535 ABCA10Q8WWZ4 1543 aa13.17□□□□□ -0.3
BBS4-214ENST00000568535 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
BBS4-214ENST00000568535 WDR62O43379 1518 aa13.15□□□□□ -0.3
BBS4-214ENST00000568535 KIF21BO75037 1637 aa13.14□□□□□ -0.31
BBS4-214ENST00000568535 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
BBS4-214ENST00000568535 IGF1RP08069 1367 aa13.13□□□□□ -0.31
BBS4-214ENST00000568535 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
BBS4-214ENST00000568535 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
BBS4-214ENST00000568535 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
BBS4-214ENST00000568535 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
BBS4-214ENST00000568535 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
BBS4-214ENST00000568535 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
BBS4-214ENST00000568535 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
BBS4-214ENST00000568535 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
BBS4-214ENST00000568535 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
BBS4-214ENST00000568535 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
BBS4-214ENST00000568535 WDR97A6NE52 1622 aa13.04□□□□□ -0.32
BBS4-214ENST00000568535 CEP162Q5TB80 1403 aa13.02□□□□□ -0.33
BBS4-214ENST00000568535 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
BBS4-214ENST00000568535 FOXD1Q16676 465 aa13.01□□□□□ -0.33
BBS4-214ENST00000568535 CUL7Q14999 1698 aa13□□□□□ -0.33
BBS4-214ENST00000568535 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
BBS4-214ENST00000568535 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
BBS4-214ENST00000568535 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.333e-7■■■■■ 28.7
BBS4-214ENST00000568535 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
BBS4-214ENST00000568535 CLIP1P30622 1438 aa12.96□□□□□ -0.34
BBS4-214ENST00000568535 FHAD1B1AJZ9 1412 aa12.95□□□□□ -0.34
BBS4-214ENST00000568535 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
BBS4-214ENST00000568535 ILDR1Q86SU0 546 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms