RNA–Protein interactions for RNA: ENST00000568140.1

AC009054.1-201, humanhuman

TSL 3 BASIC

Gene AC009054.1, Length 427 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.1-201ENST00000568140 NISCHQ9Y2I1 1504 aa14.5□□□□□ -0.09
AC009054.1-201ENST00000568140 AEBP2Q6ZN18 517 aaPredicted RBP13.75□□□□□ -0.21
AC009054.1-201ENST00000568140 CHIC1Q5VXU3 224 aa13.02□□□□□ -0.33
AC009054.1-201ENST00000568140 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
AC009054.1-201ENST00000568140 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
AC009054.1-201ENST00000568140 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
AC009054.1-201ENST00000568140 DCAF8L2P0C7V8 631 aa12.05□□□□□ -0.48
AC009054.1-201ENST00000568140 ABCC9O60706 1549 aa12.01□□□□□ -0.49
AC009054.1-201ENST00000568140 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
AC009054.1-201ENST00000568140 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
AC009054.1-201ENST00000568140 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
AC009054.1-201ENST00000568140 NACADO15069 1562 aa11.83□□□□□ -0.52
AC009054.1-201ENST00000568140 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
AC009054.1-201ENST00000568140 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.53
AC009054.1-201ENST00000568140 PHF23Q9BUL5 403 aaPredicted RBP11.68□□□□□ -0.54
AC009054.1-201ENST00000568140 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
AC009054.1-201ENST00000568140 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
AC009054.1-201ENST00000568140 UNC13AQ9UPW8 1703 aa11.35□□□□□ -0.59
AC009054.1-201ENST00000568140 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
AC009054.1-201ENST00000568140 SUPT5HO00267 1087 aaKnown RBP11.32□□□□□ -0.6
AC009054.1-201ENST00000568140 CECR2Q9BXF3 1484 aa11.25□□□□□ -0.61
AC009054.1-201ENST00000568140 RSF1Q96T23 1441 aaPredicted RBP11.25□□□□□ -0.61
AC009054.1-201ENST00000568140 FOXD1Q16676 465 aa11.18□□□□□ -0.62
AC009054.1-201ENST00000568140 BAZ1AQ9NRL2 1556 aaPredicted RBP11.18□□□□□ -0.62
AC009054.1-201ENST00000568140 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
AC009054.1-201ENST00000568140 SMARCA4P51532 1647 aa11.1□□□□□ -0.63
AC009054.1-201ENST00000568140 WIZO95785 1651 aa11.02□□□□□ -0.64
AC009054.1-201ENST00000568140 ATAD2BQ9ULI0 1458 aa11.01□□□□□ -0.65
AC009054.1-201ENST00000568140 EIF4G1Q04637 1599 aaKnown RBP11.01□□□□□ -0.65
AC009054.1-201ENST00000568140 PEG3Q9GZU2 1588 aa11.01□□□□□ -0.65
AC009054.1-201ENST00000568140 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
AC009054.1-201ENST00000568140 NCAPD3P42695 1498 aa10.96□□□□□ -0.65
AC009054.1-201ENST00000568140 TOP2AP11388 1531 aaKnown RBP10.94□□□□□ -0.66
AC009054.1-201ENST00000568140 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
AC009054.1-201ENST00000568140 CCDC88BA6NC98 1476 aa10.88□□□□□ -0.67
AC009054.1-201ENST00000568140 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
AC009054.1-201ENST00000568140 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
AC009054.1-201ENST00000568140 MSH5O43196 834 aa10.84□□□□□ -0.67
AC009054.1-201ENST00000568140 DNAJC5BQ9UF47 199 aa10.74□□□□□ -0.69
AC009054.1-201ENST00000568140 TRIM41Q8WV44 630 aa10.7□□□□□ -0.7
AC009054.1-201ENST00000568140 CADPSQ9ULU8 1353 aa10.68□□□□□ -0.7
AC009054.1-201ENST00000568140 CFTRP13569 1480 aa10.67□□□□□ -0.7
AC009054.1-201ENST00000568140 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
AC009054.1-201ENST00000568140 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
AC009054.1-201ENST00000568140 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.72
AC009054.1-201ENST00000568140 NESP48681 1621 aa10.51□□□□□ -0.73
AC009054.1-201ENST00000568140 PDS5BQ9NTI5 1447 aa10.51□□□□□ -0.73
AC009054.1-201ENST00000568140 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
AC009054.1-201ENST00000568140 PRDM2Q13029 1718 aa10.45□□□□□ -0.74
AC009054.1-201ENST00000568140 TOP2BQ02880 1626 aa10.44□□□□□ -0.74
AC009054.1-201ENST00000568140 SYNJ1O43426 1573 aa10.44□□□□□ -0.74
AC009054.1-201ENST00000568140 FAM9AQ8IZU1 332 aaPredicted RBP10.44□□□□□ -0.74
AC009054.1-201ENST00000568140 CUX1P39880 1505 aa10.43□□□□□ -0.74
AC009054.1-201ENST00000568140 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
AC009054.1-201ENST00000568140 CSRNP3Q8WYN3 585 aa10.42□□□□□ -0.74
AC009054.1-201ENST00000568140 EEA1Q15075 1411 aa10.41□□□□□ -0.74
AC009054.1-201ENST00000568140 BIVM-ERCC5R4GMW8 1640 aa10.41□□□□□ -0.74
AC009054.1-201ENST00000568140 LOC105371045A0A1W2PR82 267 aa10.41□□□□□ -0.74
AC009054.1-201ENST00000568140 SOGA1O94964 1423 aa10.41□□□□□ -0.74
AC009054.1-201ENST00000568140 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
AC009054.1-201ENST00000568140 DNMBPQ6XZF7 1577 aa10.36□□□□□ -0.75
AC009054.1-201ENST00000568140 PIAS4Q8N2W9 510 aaPredicted RBP10.36□□□□□ -0.75
AC009054.1-201ENST00000568140 RUSC2Q8N2Y8 1516 aa10.36□□□□□ -0.75
AC009054.1-201ENST00000568140 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
AC009054.1-201ENST00000568140 FGD5Q6ZNL6 1462 aa10.34□□□□□ -0.75
AC009054.1-201ENST00000568140 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
AC009054.1-201ENST00000568140 MRC2Q9UBG0 1479 aa10.33□□□□□ -0.76
AC009054.1-201ENST00000568140 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
AC009054.1-201ENST00000568140 POLA1P09884 1462 aaPredicted RBP10.31□□□□□ -0.76
AC009054.1-201ENST00000568140 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
AC009054.1-201ENST00000568140 CUX2O14529 1486 aa10.29□□□□□ -0.76
AC009054.1-201ENST00000568140 RAD54L2Q9Y4B4 1467 aa10.29□□□□□ -0.76
AC009054.1-201ENST00000568140 IGF1RP08069 1367 aa10.28□□□□□ -0.76
AC009054.1-201ENST00000568140 ABCA10Q8WWZ4 1543 aa10.28□□□□□ -0.76
AC009054.1-201ENST00000568140 WDR62O43379 1518 aa10.26□□□□□ -0.77
AC009054.1-201ENST00000568140 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
AC009054.1-201ENST00000568140 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
AC009054.1-201ENST00000568140 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
AC009054.1-201ENST00000568140 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
AC009054.1-201ENST00000568140 CARMIL1Q5VZK9 1371 aa10.23□□□□□ -0.77
AC009054.1-201ENST00000568140 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
AC009054.1-201ENST00000568140 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
AC009054.1-201ENST00000568140 IFT140Q96RY7 1462 aa10.23□□□□□ -0.77
AC009054.1-201ENST00000568140 PLPPR3Q6T4P5 718 aa10.21□□□□□ -0.77
AC009054.1-201ENST00000568140 KIF21BO75037 1637 aa10.19□□□□□ -0.78
AC009054.1-201ENST00000568140 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
AC009054.1-201ENST00000568140 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
AC009054.1-201ENST00000568140 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
AC009054.1-201ENST00000568140 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
AC009054.1-201ENST00000568140 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
AC009054.1-201ENST00000568140 AQRO60306 1485 aaKnown RBP eCLIP10.16□□□□□ -0.78
AC009054.1-201ENST00000568140 WDR97A6NE52 1622 aa10.14□□□□□ -0.79
AC009054.1-201ENST00000568140 ABCA5Q8WWZ7 1642 aa10.13□□□□□ -0.79
AC009054.1-201ENST00000568140 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
AC009054.1-201ENST00000568140 GRIN2BQ13224 1484 aa10.12□□□□□ -0.79
AC009054.1-201ENST00000568140 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
AC009054.1-201ENST00000568140 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
AC009054.1-201ENST00000568140 ADRA2BP18089 450 aa10.09□□□□□ -0.79
AC009054.1-201ENST00000568140 CUL7Q14999 1698 aa10.08□□□□□ -0.8
AC009054.1-201ENST00000568140 PPP6R1Q9UPN7 881 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms