RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
CDH16-206ENST00000567269 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
CDH16-206ENST00000567269 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
CDH16-206ENST00000567269 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
CDH16-206ENST00000567269 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
CDH16-206ENST00000567269 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
CDH16-206ENST00000567269 ABCC9O60706 1549 aa20.88■□□□□ 0.93
CDH16-206ENST00000567269 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
CDH16-206ENST00000567269 SCRIBQ14160 1630 aa20.58■□□□□ 0.88
CDH16-206ENST00000567269 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
CDH16-206ENST00000567269 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
CDH16-206ENST00000567269 NACADO15069 1562 aa20.34■□□□□ 0.85
CDH16-206ENST00000567269 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
CDH16-206ENST00000567269 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.81
CDH16-206ENST00000567269 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
CDH16-206ENST00000567269 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
CDH16-206ENST00000567269 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
CDH16-206ENST00000567269 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
CDH16-206ENST00000567269 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
CDH16-206ENST00000567269 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.76
CDH16-206ENST00000567269 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
CDH16-206ENST00000567269 WIZO95785 1651 aa19.73■□□□□ 0.75
CDH16-206ENST00000567269 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
CDH16-206ENST00000567269 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
CDH16-206ENST00000567269 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
CDH16-206ENST00000567269 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
CDH16-206ENST00000567269 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
CDH16-206ENST00000567269 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
CDH16-206ENST00000567269 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
CDH16-206ENST00000567269 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
CDH16-206ENST00000567269 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
CDH16-206ENST00000567269 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
CDH16-206ENST00000567269 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
CDH16-206ENST00000567269 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
CDH16-206ENST00000567269 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
CDH16-206ENST00000567269 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.65
CDH16-206ENST00000567269 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
CDH16-206ENST00000567269 HRCP23327 699 aa19.04■□□□□ 0.64
CDH16-206ENST00000567269 PEG3Q9GZU2 1588 aa19.03■□□□□ 0.64
CDH16-206ENST00000567269 SOGA1O94964 1423 aa19.03■□□□□ 0.64
CDH16-206ENST00000567269 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
CDH16-206ENST00000567269 TTBK1Q5TCY1 1321 aaPredicted RBP19.02■□□□□ 0.64
CDH16-206ENST00000567269 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
CDH16-206ENST00000567269 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
CDH16-206ENST00000567269 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
CDH16-206ENST00000567269 NCAPD3P42695 1498 aa18.86■□□□□ 0.61
CDH16-206ENST00000567269 EEA1Q15075 1411 aa18.8■□□□□ 0.6
CDH16-206ENST00000567269 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
CDH16-206ENST00000567269 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
CDH16-206ENST00000567269 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
CDH16-206ENST00000567269 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
CDH16-206ENST00000567269 GOLGA3Q08378 1498 aa18.7■□□□□ 0.58
CDH16-206ENST00000567269 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
CDH16-206ENST00000567269 APLP2Q06481 763 aa18.63■□□□□ 0.57
CDH16-206ENST00000567269 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
CDH16-206ENST00000567269 CFTRP13569 1480 aa18.6■□□□□ 0.57
CDH16-206ENST00000567269 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
CDH16-206ENST00000567269 RAPGEF2Q9Y4G8 1499 aa18.56■□□□□ 0.56
CDH16-206ENST00000567269 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
CDH16-206ENST00000567269 CLIP1P30622 1438 aa18.55■□□□□ 0.56
CDH16-206ENST00000567269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
CDH16-206ENST00000567269 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
CDH16-206ENST00000567269 CUX1P39880 1505 aa18.52■□□□□ 0.56
CDH16-206ENST00000567269 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
CDH16-206ENST00000567269 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
CDH16-206ENST00000567269 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
CDH16-206ENST00000567269 KIF21BO75037 1637 aa18.43■□□□□ 0.54
CDH16-206ENST00000567269 CUX2O14529 1486 aa18.42■□□□□ 0.54
CDH16-206ENST00000567269 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
CDH16-206ENST00000567269 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
CDH16-206ENST00000567269 NESP48681 1621 aa18.4■□□□□ 0.54
CDH16-206ENST00000567269 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
CDH16-206ENST00000567269 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
CDH16-206ENST00000567269 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
CDH16-206ENST00000567269 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.53
CDH16-206ENST00000567269 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.52
CDH16-206ENST00000567269 PRXQ9BXM0 1461 aa18.32■□□□□ 0.52
CDH16-206ENST00000567269 P3H3Q8IVL6 736 aa18.29■□□□□ 0.52
CDH16-206ENST00000567269 IGF1RP08069 1367 aa18.28■□□□□ 0.52
CDH16-206ENST00000567269 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
CDH16-206ENST00000567269 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
CDH16-206ENST00000567269 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
CDH16-206ENST00000567269 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
CDH16-206ENST00000567269 KANK4Q5T7N3 995 aaPredicted RBP18.18■□□□□ 0.5
CDH16-206ENST00000567269 ITGAEP38570 1179 aa18.18■□□□□ 0.5
CDH16-206ENST00000567269 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
CDH16-206ENST00000567269 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
CDH16-206ENST00000567269 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
CDH16-206ENST00000567269 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
CDH16-206ENST00000567269 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
CDH16-206ENST00000567269 DNMBPQ6XZF7 1577 aa18.12■□□□□ 0.49
CDH16-206ENST00000567269 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
CDH16-206ENST00000567269 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.49
CDH16-206ENST00000567269 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
CDH16-206ENST00000567269 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
CDH16-206ENST00000567269 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
CDH16-206ENST00000567269 FHOD3Q2V2M9 1422 aa17.96■□□□□ 0.47
CDH16-206ENST00000567269 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
CDH16-206ENST00000567269 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
CDH16-206ENST00000567269 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms