RNA–Protein interactions for RNA: ENST00000566042.5

CPNE2-206, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 3,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-206ENST00000566042 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
CPNE2-206ENST00000566042 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
CPNE2-206ENST00000566042 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
CPNE2-206ENST00000566042 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
CPNE2-206ENST00000566042 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
CPNE2-206ENST00000566042 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
CPNE2-206ENST00000566042 ABCC9O60706 1549 aa17.86■□□□□ 0.45
CPNE2-206ENST00000566042 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
CPNE2-206ENST00000566042 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
CPNE2-206ENST00000566042 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
CPNE2-206ENST00000566042 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
CPNE2-206ENST00000566042 NACADO15069 1562 aa17.36■□□□□ 0.37
CPNE2-206ENST00000566042 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
CPNE2-206ENST00000566042 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
CPNE2-206ENST00000566042 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
CPNE2-206ENST00000566042 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
CPNE2-206ENST00000566042 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
CPNE2-206ENST00000566042 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
CPNE2-206ENST00000566042 WIZO95785 1651 aa16.96■□□□□ 0.31
CPNE2-206ENST00000566042 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
CPNE2-206ENST00000566042 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
CPNE2-206ENST00000566042 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
CPNE2-206ENST00000566042 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
CPNE2-206ENST00000566042 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
CPNE2-206ENST00000566042 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
CPNE2-206ENST00000566042 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
CPNE2-206ENST00000566042 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
CPNE2-206ENST00000566042 CCDC88BA6NC98 1476 aa16.62■□□□□ 0.25
CPNE2-206ENST00000566042 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
CPNE2-206ENST00000566042 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
CPNE2-206ENST00000566042 SMARCA2P51531 1590 aa16.54■□□□□ 0.24
CPNE2-206ENST00000566042 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
CPNE2-206ENST00000566042 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
CPNE2-206ENST00000566042 BAZ1BQ9UIG0 1483 aaKnown RBP16.4■□□□□ 0.22
CPNE2-206ENST00000566042 PPARGC1BQ86YN6 1023 aaKnown RBP16.39■□□□□ 0.22
CPNE2-206ENST00000566042 SOGA1O94964 1423 aa16.33■□□□□ 0.2
CPNE2-206ENST00000566042 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
CPNE2-206ENST00000566042 HRCP23327 699 aa16.28■□□□□ 0.2
CPNE2-206ENST00000566042 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
CPNE2-206ENST00000566042 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.19
CPNE2-206ENST00000566042 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
CPNE2-206ENST00000566042 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
CPNE2-206ENST00000566042 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
CPNE2-206ENST00000566042 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
CPNE2-206ENST00000566042 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
CPNE2-206ENST00000566042 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
CPNE2-206ENST00000566042 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
CPNE2-206ENST00000566042 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
CPNE2-206ENST00000566042 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
CPNE2-206ENST00000566042 EEA1Q15075 1411 aa15.99■□□□□ 0.15
CPNE2-206ENST00000566042 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
CPNE2-206ENST00000566042 GOLGA3Q08378 1498 aa15.96■□□□□ 0.15
CPNE2-206ENST00000566042 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.14
CPNE2-206ENST00000566042 CFTRP13569 1480 aa15.92■□□□□ 0.14
CPNE2-206ENST00000566042 RAPGEF2Q9Y4G8 1499 aa15.92■□□□□ 0.14
CPNE2-206ENST00000566042 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
CPNE2-206ENST00000566042 CUX1P39880 1505 aa15.9■□□□□ 0.14
CPNE2-206ENST00000566042 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
CPNE2-206ENST00000566042 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
CPNE2-206ENST00000566042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
CPNE2-206ENST00000566042 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
CPNE2-206ENST00000566042 CLIP1P30622 1438 aa15.83■□□□□ 0.13
CPNE2-206ENST00000566042 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
CPNE2-206ENST00000566042 NESP48681 1621 aa15.8■□□□□ 0.12
CPNE2-206ENST00000566042 KIF21BO75037 1637 aa15.79■□□□□ 0.12
CPNE2-206ENST00000566042 KIF27Q86VH2 1401 aa15.76■□□□□ 0.11
CPNE2-206ENST00000566042 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
CPNE2-206ENST00000566042 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
CPNE2-206ENST00000566042 CUX2O14529 1486 aa15.74■□□□□ 0.11
CPNE2-206ENST00000566042 APLP2Q06481 763 aa15.73■□□□□ 0.11
CPNE2-206ENST00000566042 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
CPNE2-206ENST00000566042 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
CPNE2-206ENST00000566042 PRXQ9BXM0 1461 aa15.69■□□□□ 0.1
CPNE2-206ENST00000566042 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
CPNE2-206ENST00000566042 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
CPNE2-206ENST00000566042 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
CPNE2-206ENST00000566042 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
CPNE2-206ENST00000566042 IGF1RP08069 1367 aa15.63■□□□□ 0.09
CPNE2-206ENST00000566042 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
CPNE2-206ENST00000566042 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
CPNE2-206ENST00000566042 ERICH3Q5RHP9 1530 aa15.59■□□□□ 0.09
CPNE2-206ENST00000566042 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
CPNE2-206ENST00000566042 KANK4Q5T7N3 995 aaPredicted RBP15.58■□□□□ 0.08
CPNE2-206ENST00000566042 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
CPNE2-206ENST00000566042 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
CPNE2-206ENST00000566042 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
CPNE2-206ENST00000566042 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
CPNE2-206ENST00000566042 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
CPNE2-206ENST00000566042 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
CPNE2-206ENST00000566042 DNMBPQ6XZF7 1577 aa15.5■□□□□ 0.07
CPNE2-206ENST00000566042 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
CPNE2-206ENST00000566042 ITGAEP38570 1179 aa15.48■□□□□ 0.07
CPNE2-206ENST00000566042 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
CPNE2-206ENST00000566042 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
CPNE2-206ENST00000566042 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
CPNE2-206ENST00000566042 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
CPNE2-206ENST00000566042 FHOD3Q2V2M9 1422 aa15.38■□□□□ 0.05
CPNE2-206ENST00000566042 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
CPNE2-206ENST00000566042 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.04
CPNE2-206ENST00000566042 FAM50AQ14320 339 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms