RNA–Protein interactions for RNA: ENST00000565329.1

ABCC11-205, Transcript of ATP binding cassette subfamily C member 11, humanhuman

TSL 1 (best)

Gene ABCC11, Length 1,813 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC11-205ENST00000565329 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
ABCC11-205ENST00000565329 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
ABCC11-205ENST00000565329 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
ABCC11-205ENST00000565329 ABCC9O60706 1549 aa21.57■■□□□ 1.04
ABCC11-205ENST00000565329 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
ABCC11-205ENST00000565329 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
ABCC11-205ENST00000565329 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
ABCC11-205ENST00000565329 NACADO15069 1562 aa21.09■□□□□ 0.97
ABCC11-205ENST00000565329 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
ABCC11-205ENST00000565329 RB1CC1Q8TDY2 1594 aa20.96■□□□□ 0.95
ABCC11-205ENST00000565329 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
ABCC11-205ENST00000565329 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
ABCC11-205ENST00000565329 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
ABCC11-205ENST00000565329 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
ABCC11-205ENST00000565329 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
ABCC11-205ENST00000565329 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
ABCC11-205ENST00000565329 HRCP23327 699 aa20.06■□□□□ 0.8
ABCC11-205ENST00000565329 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
ABCC11-205ENST00000565329 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
ABCC11-205ENST00000565329 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
ABCC11-205ENST00000565329 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
ABCC11-205ENST00000565329 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
ABCC11-205ENST00000565329 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
ABCC11-205ENST00000565329 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.75
ABCC11-205ENST00000565329 WIZO95785 1651 aa19.67■□□□□ 0.74
ABCC11-205ENST00000565329 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
ABCC11-205ENST00000565329 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
ABCC11-205ENST00000565329 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
ABCC11-205ENST00000565329 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
ABCC11-205ENST00000565329 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
ABCC11-205ENST00000565329 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
ABCC11-205ENST00000565329 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
ABCC11-205ENST00000565329 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
ABCC11-205ENST00000565329 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
ABCC11-205ENST00000565329 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
ABCC11-205ENST00000565329 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
ABCC11-205ENST00000565329 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.69
ABCC11-205ENST00000565329 ZEB1P37275 1124 aaPredicted RBP19.35■□□□□ 0.69
ABCC11-205ENST00000565329 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
ABCC11-205ENST00000565329 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
ABCC11-205ENST00000565329 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
ABCC11-205ENST00000565329 CFTRP13569 1480 aa18.97■□□□□ 0.63
ABCC11-205ENST00000565329 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
ABCC11-205ENST00000565329 NESP48681 1621 aa18.87■□□□□ 0.61
ABCC11-205ENST00000565329 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
ABCC11-205ENST00000565329 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
ABCC11-205ENST00000565329 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
ABCC11-205ENST00000565329 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
ABCC11-205ENST00000565329 EEA1Q15075 1411 aa18.8■□□□□ 0.6
ABCC11-205ENST00000565329 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
ABCC11-205ENST00000565329 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
ABCC11-205ENST00000565329 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
ABCC11-205ENST00000565329 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
ABCC11-205ENST00000565329 CEP162Q5TB80 1403 aa18.68■□□□□ 0.58
ABCC11-205ENST00000565329 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
ABCC11-205ENST00000565329 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
ABCC11-205ENST00000565329 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
ABCC11-205ENST00000565329 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
ABCC11-205ENST00000565329 CUX1P39880 1505 aa18.61■□□□□ 0.57
ABCC11-205ENST00000565329 SOGA1O94964 1423 aa18.61■□□□□ 0.57
ABCC11-205ENST00000565329 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
ABCC11-205ENST00000565329 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
ABCC11-205ENST00000565329 TOP2BQ02880 1626 aa18.58■□□□□ 0.57
ABCC11-205ENST00000565329 GOLGA3Q08378 1498 aa18.58■□□□□ 0.57
ABCC11-205ENST00000565329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
ABCC11-205ENST00000565329 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
ABCC11-205ENST00000565329 URB2Q14146 1524 aaKnown RBP18.53■□□□□ 0.56
ABCC11-205ENST00000565329 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.55
ABCC11-205ENST00000565329 TOPBP1Q92547 1522 aa18.5■□□□□ 0.55
ABCC11-205ENST00000565329 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
ABCC11-205ENST00000565329 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
ABCC11-205ENST00000565329 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
ABCC11-205ENST00000565329 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
ABCC11-205ENST00000565329 KIF21BO75037 1637 aa18.47■□□□□ 0.55
ABCC11-205ENST00000565329 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
ABCC11-205ENST00000565329 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
ABCC11-205ENST00000565329 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
ABCC11-205ENST00000565329 WDR62O43379 1518 aa18.43■□□□□ 0.54
ABCC11-205ENST00000565329 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
ABCC11-205ENST00000565329 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
ABCC11-205ENST00000565329 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
ABCC11-205ENST00000565329 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.52
ABCC11-205ENST00000565329 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
ABCC11-205ENST00000565329 CLIP1P30622 1438 aa18.32■□□□□ 0.52
ABCC11-205ENST00000565329 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
ABCC11-205ENST00000565329 CUX2O14529 1486 aa18.3■□□□□ 0.52
ABCC11-205ENST00000565329 VPS8Q8N3P4 1428 aa18.3■□□□□ 0.52
ABCC11-205ENST00000565329 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
ABCC11-205ENST00000565329 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
ABCC11-205ENST00000565329 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
ABCC11-205ENST00000565329 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
ABCC11-205ENST00000565329 KIF27Q86VH2 1401 aa18.22■□□□□ 0.51
ABCC11-205ENST00000565329 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
ABCC11-205ENST00000565329 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
ABCC11-205ENST00000565329 APLP2Q06481 763 aa18.2■□□□□ 0.5
ABCC11-205ENST00000565329 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
ABCC11-205ENST00000565329 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
ABCC11-205ENST00000565329 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
ABCC11-205ENST00000565329 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
ABCC11-205ENST00000565329 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms