RNA–Protein interactions for RNA: ENST00000564987.1

EARS2-214, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene EARS2, Length 2,870 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-214ENST00000564987 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
EARS2-214ENST00000564987 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
EARS2-214ENST00000564987 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
EARS2-214ENST00000564987 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
EARS2-214ENST00000564987 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
EARS2-214ENST00000564987 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
EARS2-214ENST00000564987 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
EARS2-214ENST00000564987 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
EARS2-214ENST00000564987 ABCC9O60706 1549 aa18.95■□□□□ 0.62
EARS2-214ENST00000564987 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
EARS2-214ENST00000564987 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
EARS2-214ENST00000564987 NACADO15069 1562 aa18.87■□□□□ 0.61
EARS2-214ENST00000564987 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
EARS2-214ENST00000564987 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.57
EARS2-214ENST00000564987 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
EARS2-214ENST00000564987 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
EARS2-214ENST00000564987 HRCP23327 699 aa18.33■□□□□ 0.52
EARS2-214ENST00000564987 WIZO95785 1651 aa18.31■□□□□ 0.52
EARS2-214ENST00000564987 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
EARS2-214ENST00000564987 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.51
EARS2-214ENST00000564987 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
EARS2-214ENST00000564987 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
EARS2-214ENST00000564987 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
EARS2-214ENST00000564987 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
EARS2-214ENST00000564987 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
EARS2-214ENST00000564987 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
EARS2-214ENST00000564987 TOP2AP11388 1531 aaKnown RBP18.05■□□□□ 0.48
EARS2-214ENST00000564987 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
EARS2-214ENST00000564987 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
EARS2-214ENST00000564987 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
EARS2-214ENST00000564987 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
EARS2-214ENST00000564987 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
EARS2-214ENST00000564987 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
EARS2-214ENST00000564987 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
EARS2-214ENST00000564987 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
EARS2-214ENST00000564987 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
EARS2-214ENST00000564987 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
EARS2-214ENST00000564987 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
EARS2-214ENST00000564987 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
EARS2-214ENST00000564987 SOGA1O94964 1423 aa17.59■□□□□ 0.41
EARS2-214ENST00000564987 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
EARS2-214ENST00000564987 MYT1Q01538 1121 aa17.54■□□□□ 0.4
EARS2-214ENST00000564987 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.39
EARS2-214ENST00000564987 EEA1Q15075 1411 aa17.5■□□□□ 0.39
EARS2-214ENST00000564987 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
EARS2-214ENST00000564987 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
EARS2-214ENST00000564987 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
EARS2-214ENST00000564987 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
EARS2-214ENST00000564987 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
EARS2-214ENST00000564987 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
EARS2-214ENST00000564987 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
EARS2-214ENST00000564987 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
EARS2-214ENST00000564987 TOP2BQ02880 1626 aa17.31■□□□□ 0.36
EARS2-214ENST00000564987 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
EARS2-214ENST00000564987 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
EARS2-214ENST00000564987 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
EARS2-214ENST00000564987 KIF21BO75037 1637 aa17.26■□□□□ 0.35
EARS2-214ENST00000564987 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
EARS2-214ENST00000564987 CFTRP13569 1480 aa17.25■□□□□ 0.35
EARS2-214ENST00000564987 CUX1P39880 1505 aa17.18■□□□□ 0.34
EARS2-214ENST00000564987 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
EARS2-214ENST00000564987 CLIP1P30622 1438 aa17.11■□□□□ 0.33
EARS2-214ENST00000564987 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
EARS2-214ENST00000564987 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
EARS2-214ENST00000564987 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
EARS2-214ENST00000564987 PRXQ9BXM0 1461 aa17.08■□□□□ 0.33
EARS2-214ENST00000564987 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
EARS2-214ENST00000564987 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
EARS2-214ENST00000564987 KIF27Q86VH2 1401 aa17.03■□□□□ 0.32
EARS2-214ENST00000564987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
EARS2-214ENST00000564987 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.32
EARS2-214ENST00000564987 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
EARS2-214ENST00000564987 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.31
EARS2-214ENST00000564987 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
EARS2-214ENST00000564987 IGF1RP08069 1367 aa16.91■□□□□ 0.3
EARS2-214ENST00000564987 CUX2O14529 1486 aa16.9■□□□□ 0.3
EARS2-214ENST00000564987 FGD5Q6ZNL6 1462 aa16.9■□□□□ 0.3
EARS2-214ENST00000564987 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
EARS2-214ENST00000564987 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
EARS2-214ENST00000564987 APLP2Q06481 763 aa16.88■□□□□ 0.29
EARS2-214ENST00000564987 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
EARS2-214ENST00000564987 NESP48681 1621 aa16.84■□□□□ 0.29
EARS2-214ENST00000564987 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
EARS2-214ENST00000564987 ARHGAP35Q9NRY4 1499 aa16.79■□□□□ 0.28
EARS2-214ENST00000564987 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
EARS2-214ENST00000564987 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
EARS2-214ENST00000564987 GTF3C3Q9Y5Q9 886 aa16.78■□□□□ 0.28
EARS2-214ENST00000564987 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
EARS2-214ENST00000564987 KANK4Q5T7N3 995 aaPredicted RBP16.76■□□□□ 0.27
EARS2-214ENST00000564987 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
EARS2-214ENST00000564987 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
EARS2-214ENST00000564987 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
EARS2-214ENST00000564987 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
EARS2-214ENST00000564987 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
EARS2-214ENST00000564987 CENPBP07199 599 aaPredicted RBP16.73■□□□□ 0.27
EARS2-214ENST00000564987 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
EARS2-214ENST00000564987 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
EARS2-214ENST00000564987 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
EARS2-214ENST00000564987 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
EARS2-214ENST00000564987 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 585 ms