RNA–Protein interactions for RNA: ENST00000562030.3

TCF4-212, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-212ENST00000562030 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
TCF4-212ENST00000562030 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
TCF4-212ENST00000562030 NISCHQ9Y2I1 1504 aa14.59□□□□□ -0.07
TCF4-212ENST00000562030 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
TCF4-212ENST00000562030 PHF23Q9BUL5 403 aaPredicted RBP13.96□□□□□ -0.17
TCF4-212ENST00000562030 FOXD1Q16676 465 aa13.16□□□□□ -0.3
TCF4-212ENST00000562030 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
TCF4-212ENST00000562030 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
TCF4-212ENST00000562030 MSH5O43196 834 aa12.41□□□□□ -0.42
TCF4-212ENST00000562030 ABCC9O60706 1549 aa12.34□□□□□ -0.43
TCF4-212ENST00000562030 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
TCF4-212ENST00000562030 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
TCF4-212ENST00000562030 ADRA2BP18089 450 aa12.23□□□□□ -0.45
TCF4-212ENST00000562030 ZCCHC6Q5VYS8 1495 aaKnown RBP12.22□□□□□ -0.45
TCF4-212ENST00000562030 POTEDQ86YR6 584 aa12.19□□□□□ -0.46
TCF4-212ENST00000562030 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
TCF4-212ENST00000562030 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
TCF4-212ENST00000562030 NACADO15069 1562 aa12.04□□□□□ -0.48
TCF4-212ENST00000562030 RB1CC1Q8TDY2 1594 aa12.04□□□□□ -0.48
TCF4-212ENST00000562030 MYO15BQ96JP2 1530 aa11.97□□□□□ -0.49
TCF4-212ENST00000562030 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
TCF4-212ENST00000562030 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
TCF4-212ENST00000562030 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
TCF4-212ENST00000562030 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
TCF4-212ENST00000562030 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
TCF4-212ENST00000562030 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
TCF4-212ENST00000562030 BAZ1AQ9NRL2 1556 aaPredicted RBP11.34□□□□□ -0.59
TCF4-212ENST00000562030 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
TCF4-212ENST00000562030 EIF4G1Q04637 1599 aaKnown RBP11.3□□□□□ -0.6
TCF4-212ENST00000562030 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
TCF4-212ENST00000562030 WIZO95785 1651 aa11.27□□□□□ -0.61
TCF4-212ENST00000562030 MROH2BQ7Z745 1585 aa11.26□□□□□ -0.61
TCF4-212ENST00000562030 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
TCF4-212ENST00000562030 CC2D2AQ9P2K1 1620 aa11.22□□□□□ -0.61
TCF4-212ENST00000562030 DMRT2Q9Y5R5 561 aa11.22□□□□□ -0.61
TCF4-212ENST00000562030 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
TCF4-212ENST00000562030 SMARCA2P51531 1590 aa11.18□□□□□ -0.62
TCF4-212ENST00000562030 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
TCF4-212ENST00000562030 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
TCF4-212ENST00000562030 BAZ1BQ9UIG0 1483 aaKnown RBP11.1□□□□□ -0.63
TCF4-212ENST00000562030 ATAD2BQ9ULI0 1458 aa11.1□□□□□ -0.63
TCF4-212ENST00000562030 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
TCF4-212ENST00000562030 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
TCF4-212ENST00000562030 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
TCF4-212ENST00000562030 NCAPD3P42695 1498 aa11□□□□□ -0.65
TCF4-212ENST00000562030 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
TCF4-212ENST00000562030 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
TCF4-212ENST00000562030 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
TCF4-212ENST00000562030 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
TCF4-212ENST00000562030 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
TCF4-212ENST00000562030 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
TCF4-212ENST00000562030 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
TCF4-212ENST00000562030 HOXD11P31277 338 aaPredicted RBP10.78□□□□□ -0.68
TCF4-212ENST00000562030 NESP48681 1621 aa10.75□□□□□ -0.69
TCF4-212ENST00000562030 CFTRP13569 1480 aa10.72□□□□□ -0.69
TCF4-212ENST00000562030 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
TCF4-212ENST00000562030 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
TCF4-212ENST00000562030 ABCC8Q09428 1581 aa10.7□□□□□ -0.7
TCF4-212ENST00000562030 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
TCF4-212ENST00000562030 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
TCF4-212ENST00000562030 CEP164Q9UPV0 1460 aa10.66□□□□□ -0.7
TCF4-212ENST00000562030 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
TCF4-212ENST00000562030 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
TCF4-212ENST00000562030 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
TCF4-212ENST00000562030 SYNJ1O43426 1573 aa10.61□□□□□ -0.71
TCF4-212ENST00000562030 NCBP3Q53F19 620 aaKnown RBP10.6□□□□□ -0.71
TCF4-212ENST00000562030 TOP2BQ02880 1626 aa10.59□□□□□ -0.71
TCF4-212ENST00000562030 DNMBPQ6XZF7 1577 aa10.59□□□□□ -0.71
TCF4-212ENST00000562030 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
TCF4-212ENST00000562030 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
TCF4-212ENST00000562030 CUX1P39880 1505 aa10.56□□□□□ -0.72
TCF4-212ENST00000562030 MRC2Q9UBG0 1479 aa10.55□□□□□ -0.72
TCF4-212ENST00000562030 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
TCF4-212ENST00000562030 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
TCF4-212ENST00000562030 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
TCF4-212ENST00000562030 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
TCF4-212ENST00000562030 WDR62O43379 1518 aa10.52□□□□□ -0.73
TCF4-212ENST00000562030 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
TCF4-212ENST00000562030 FGD5Q6ZNL6 1462 aa10.49□□□□□ -0.73
TCF4-212ENST00000562030 PBRM1Q86U86 1689 aa10.47□□□□□ -0.73
TCF4-212ENST00000562030 SLC24A1O60721 1099 aa10.47□□□□□ -0.73
TCF4-212ENST00000562030 POLA1P09884 1462 aaPredicted RBP10.45□□□□□ -0.74
TCF4-212ENST00000562030 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
TCF4-212ENST00000562030 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
TCF4-212ENST00000562030 RAD54L2Q9Y4B4 1467 aa10.4□□□□□ -0.74
TCF4-212ENST00000562030 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
TCF4-212ENST00000562030 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
TCF4-212ENST00000562030 SOGA1O94964 1423 aa10.39□□□□□ -0.75
TCF4-212ENST00000562030 CUX2O14529 1486 aa10.37□□□□□ -0.75
TCF4-212ENST00000562030 IFT140Q96RY7 1462 aa10.37□□□□□ -0.75
TCF4-212ENST00000562030 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
TCF4-212ENST00000562030 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
TCF4-212ENST00000562030 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
TCF4-212ENST00000562030 CUL7Q14999 1698 aa10.35□□□□□ -0.75
TCF4-212ENST00000562030 KIF27Q86VH2 1401 aa10.34□□□□□ -0.75
TCF4-212ENST00000562030 EEA1Q15075 1411 aa10.33□□□□□ -0.76
TCF4-212ENST00000562030 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
TCF4-212ENST00000562030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.32□□□□□ -0.76
TCF4-212ENST00000562030 CTTNBP2Q8WZ74 1663 aa10.31□□□□□ -0.76
TCF4-212ENST00000562030 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms