RNA–Protein interactions for RNA: ENST00000561551.1

TM6SF1-205, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 3

Gene TM6SF1, Length 407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-205ENST00000561551 NISCHQ9Y2I1 1504 aa11.52□□□□□ -0.57
TM6SF1-205ENST00000561551 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
TM6SF1-205ENST00000561551 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
TM6SF1-205ENST00000561551 DCAF1Q9Y4B6 1507 aa9.58□□□□□ -0.88
TM6SF1-205ENST00000561551 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
TM6SF1-205ENST00000561551 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
TM6SF1-205ENST00000561551 SHROOM4Q9ULL8 1493 aa9.41□□□□□ -0.9
TM6SF1-205ENST00000561551 NACADO15069 1562 aa9.26□□□□□ -0.93
TM6SF1-205ENST00000561551 SUPT5HO00267 1087 aaKnown RBP9.23□□□□□ -0.93
TM6SF1-205ENST00000561551 ABCC9O60706 1549 aa9.22□□□□□ -0.93
TM6SF1-205ENST00000561551 RB1CC1Q8TDY2 1594 aa9.09□□□□□ -0.95
TM6SF1-205ENST00000561551 SCRIBQ14160 1630 aa9.04□□□□□ -0.96
TM6SF1-205ENST00000561551 RSF1Q96T23 1441 aaPredicted RBP9.04□□□□□ -0.96
TM6SF1-205ENST00000561551 CHIC1Q5VXU3 224 aa9□□□□□ -0.97
TM6SF1-205ENST00000561551 CECR2Q9BXF3 1484 aa8.91□□□□□ -0.98
TM6SF1-205ENST00000561551 MROH2BQ7Z745 1585 aa8.86□□□□□ -0.99
TM6SF1-205ENST00000561551 BAZ1AQ9NRL2 1556 aaPredicted RBP8.86□□□□□ -0.99
TM6SF1-205ENST00000561551 PABPN1Q86U42 306 aaKnown RBP eCLIP8.81□□□□□ -1
TM6SF1-205ENST00000561551 BICRAQ9NZM4 1560 aa8.79□□□□□ -1
TM6SF1-205ENST00000561551 TRIM41Q8WV44 630 aa8.74□□□□□ -1.01
TM6SF1-205ENST00000561551 SMARCA4P51532 1647 aa8.73□□□□□ -1.01
TM6SF1-205ENST00000561551 UNC13AQ9UPW8 1703 aa8.71□□□□□ -1.01
TM6SF1-205ENST00000561551 WIZO95785 1651 aa8.71□□□□□ -1.02
TM6SF1-205ENST00000561551 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
TM6SF1-205ENST00000561551 PEG3Q9GZU2 1588 aa8.7□□□□□ -1.02
TM6SF1-205ENST00000561551 CCDC88BA6NC98 1476 aa8.68□□□□□ -1.02
TM6SF1-205ENST00000561551 ATAD2BQ9ULI0 1458 aa8.66□□□□□ -1.02
TM6SF1-205ENST00000561551 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
TM6SF1-205ENST00000561551 LOC105371045A0A1W2PR82 267 aa8.62□□□□□ -1.03
TM6SF1-205ENST00000561551 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
TM6SF1-205ENST00000561551 BAZ1BQ9UIG0 1483 aaKnown RBP8.57□□□□□ -1.04
TM6SF1-205ENST00000561551 EIF4G1Q04637 1599 aaKnown RBP8.54□□□□□ -1.04
TM6SF1-205ENST00000561551 HMGXB3Q12766 1538 aa8.51□□□□□ -1.05
TM6SF1-205ENST00000561551 EEA1Q15075 1411 aa8.5□□□□□ -1.05
TM6SF1-205ENST00000561551 FAM9AQ8IZU1 332 aaPredicted RBP8.48□□□□□ -1.05
TM6SF1-205ENST00000561551 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
TM6SF1-205ENST00000561551 WRNQ14191 1432 aaPredicted RBP eCLIP8.47□□□□□ -1.05
TM6SF1-205ENST00000561551 CFTRP13569 1480 aa8.43□□□□□ -1.06
TM6SF1-205ENST00000561551 CADPSQ9ULU8 1353 aa8.41□□□□□ -1.06
TM6SF1-205ENST00000561551 TRIM26Q12899 539 aaPredicted RBP8.41□□□□□ -1.06
TM6SF1-205ENST00000561551 ABCC8Q09428 1581 aa8.4□□□□□ -1.06
TM6SF1-205ENST00000561551 SOGA1O94964 1423 aa8.4□□□□□ -1.06
TM6SF1-205ENST00000561551 TNIKQ9UKE5 1360 aa8.4□□□□□ -1.06
TM6SF1-205ENST00000561551 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
TM6SF1-205ENST00000561551 CC2D2AQ9P2K1 1620 aa8.32□□□□□ -1.08
TM6SF1-205ENST00000561551 UBTFP17480 764 aaKnown RBP8.32□□□□□ -1.08
TM6SF1-205ENST00000561551 RUSC2Q8N2Y8 1516 aa8.32□□□□□ -1.08
TM6SF1-205ENST00000561551 TOP2BQ02880 1626 aa8.32□□□□□ -1.08
TM6SF1-205ENST00000561551 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
TM6SF1-205ENST00000561551 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
TM6SF1-205ENST00000561551 CEP164Q9UPV0 1460 aa8.31□□□□□ -1.08
TM6SF1-205ENST00000561551 HRCP23327 699 aa8.3□□□□□ -1.08
TM6SF1-205ENST00000561551 KIF27Q86VH2 1401 aa8.28□□□□□ -1.08
TM6SF1-205ENST00000561551 EHMT2Q96KQ7 1210 aa8.27□□□□□ -1.09
TM6SF1-205ENST00000561551 CUX1P39880 1505 aa8.27□□□□□ -1.09
TM6SF1-205ENST00000561551 CEP162Q5TB80 1403 aa8.27□□□□□ -1.09
TM6SF1-205ENST00000561551 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
TM6SF1-205ENST00000561551 BIVM-ERCC5R4GMW8 1640 aa8.26□□□□□ -1.09
TM6SF1-205ENST00000561551 IGF1RP08069 1367 aa8.25□□□□□ -1.09
TM6SF1-205ENST00000561551 KIF21BO75037 1637 aa8.24□□□□□ -1.09
TM6SF1-205ENST00000561551 FANCD2Q9BXW9 1451 aa8.23□□□□□ -1.09
TM6SF1-205ENST00000561551 ZEB1P37275 1124 aaPredicted RBP8.22□□□□□ -1.09
TM6SF1-205ENST00000561551 PDS5BQ9NTI5 1447 aa8.21□□□□□ -1.09
TM6SF1-205ENST00000561551 ERICH3Q5RHP9 1530 aa8.21□□□□□ -1.1
TM6SF1-205ENST00000561551 RAPGEF2Q9Y4G8 1499 aa8.2□□□□□ -1.1
TM6SF1-205ENST00000561551 CLIP1P30622 1438 aa8.2□□□□□ -1.1
TM6SF1-205ENST00000561551 LAMC3Q9Y6N6 1575 aa8.18□□□□□ -1.1
TM6SF1-205ENST00000561551 DNAJC5BQ9UF47 199 aa8.17□□□□□ -1.1
TM6SF1-205ENST00000561551 CARMIL1Q5VZK9 1371 aa8.17□□□□□ -1.1
TM6SF1-205ENST00000561551 CUX2O14529 1486 aa8.16□□□□□ -1.1
TM6SF1-205ENST00000561551 FGD5Q6ZNL6 1462 aa8.15□□□□□ -1.1
TM6SF1-205ENST00000561551 ABCA10Q8WWZ4 1543 aa8.14□□□□□ -1.11
TM6SF1-205ENST00000561551 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
TM6SF1-205ENST00000561551 VPS8Q8N3P4 1428 aa8.14□□□□□ -1.11
TM6SF1-205ENST00000561551 APLP2Q06481 763 aa8.14□□□□□ -1.11
TM6SF1-205ENST00000561551 PRDM2Q13029 1718 aa8.14□□□□□ -1.11
TM6SF1-205ENST00000561551 NESP48681 1621 aa8.14□□□□□ -1.11
TM6SF1-205ENST00000561551 DNMBPQ6XZF7 1577 aa8.14□□□□□ -1.11
TM6SF1-205ENST00000561551 POLA1P09884 1462 aaPredicted RBP8.12□□□□□ -1.11
TM6SF1-205ENST00000561551 PPARGC1BQ86YN6 1023 aaKnown RBP8.11□□□□□ -1.11
TM6SF1-205ENST00000561551 URB2Q14146 1524 aaKnown RBP8.09□□□□□ -1.11
TM6SF1-205ENST00000561551 RAD54L2Q9Y4B4 1467 aa8.08□□□□□ -1.12
TM6SF1-205ENST00000561551 TDRD9Q8NDG6 1382 aaKnown RBP8.04□□□□□ -1.12
TM6SF1-205ENST00000561551 ARAP1Q96P48 1450 aa8.04□□□□□ -1.12
TM6SF1-205ENST00000561551 ARHGAP35Q9NRY4 1499 aa8.04□□□□□ -1.12
TM6SF1-205ENST00000561551 MAP3K1Q13233 1512 aa8.03□□□□□ -1.12
TM6SF1-205ENST00000561551 GAPVD1Q14C86 1478 aa8.03□□□□□ -1.12
TM6SF1-205ENST00000561551 RANGAP1P46060 587 aaPredicted RBP8.03□□□□□ -1.12
TM6SF1-205ENST00000561551 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.13
TM6SF1-205ENST00000561551 FHAD1B1AJZ9 1412 aa8.02□□□□□ -1.13
TM6SF1-205ENST00000561551 KANK4Q5T7N3 995 aaPredicted RBP8□□□□□ -1.13
TM6SF1-205ENST00000561551 CCER1Q8TC90 406 aaPredicted RBP8□□□□□ -1.13
TM6SF1-205ENST00000561551 IFT140Q96RY7 1462 aa8□□□□□ -1.13
TM6SF1-205ENST00000561551 AQRO60306 1485 aaKnown RBP eCLIP7.98□□□□□ -1.13
TM6SF1-205ENST00000561551 CUL7Q14999 1698 aa7.98□□□□□ -1.13
TM6SF1-205ENST00000561551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.97□□□□□ -1.13
TM6SF1-205ENST00000561551 TARBP1Q13395 1621 aaKnown RBP7.96□□□□□ -1.13
TM6SF1-205ENST00000561551 RRBP1Q9P2E9 1410 aaKnown RBP7.96□□□□□ -1.13
TM6SF1-205ENST00000561551 GRIN2BQ13224 1484 aa7.96□□□□□ -1.13
TM6SF1-205ENST00000561551 EFCAB5A4FU69 1503 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms