RNA–Protein interactions for RNA: ENST00000560890.5

APH1B-210, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-210ENST00000560890 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
APH1B-210ENST00000560890 NISCHQ9Y2I1 1504 aa20.57■□□□□ 0.88
APH1B-210ENST00000560890 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
APH1B-210ENST00000560890 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
APH1B-210ENST00000560890 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
APH1B-210ENST00000560890 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
APH1B-210ENST00000560890 ABCC9O60706 1549 aa17.55■□□□□ 0.4
APH1B-210ENST00000560890 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
APH1B-210ENST00000560890 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
APH1B-210ENST00000560890 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
APH1B-210ENST00000560890 NACADO15069 1562 aa16.99■□□□□ 0.31
APH1B-210ENST00000560890 MYO15BQ96JP2 1530 aa16.99■□□□□ 0.31
APH1B-210ENST00000560890 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
APH1B-210ENST00000560890 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
APH1B-210ENST00000560890 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
APH1B-210ENST00000560890 SCRIBQ14160 1630 aa16.52■□□□□ 0.23
APH1B-210ENST00000560890 FOXD1Q16676 465 aa16.37■□□□□ 0.21
APH1B-210ENST00000560890 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
APH1B-210ENST00000560890 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
APH1B-210ENST00000560890 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
APH1B-210ENST00000560890 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
APH1B-210ENST00000560890 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
APH1B-210ENST00000560890 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
APH1B-210ENST00000560890 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
APH1B-210ENST00000560890 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
APH1B-210ENST00000560890 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.12
APH1B-210ENST00000560890 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
APH1B-210ENST00000560890 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
APH1B-210ENST00000560890 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
APH1B-210ENST00000560890 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
APH1B-210ENST00000560890 NCAPD3P42695 1498 aa15.76■□□□□ 0.11
APH1B-210ENST00000560890 SMARCA2P51531 1590 aa15.72■□□□□ 0.11
APH1B-210ENST00000560890 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
APH1B-210ENST00000560890 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
APH1B-210ENST00000560890 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
APH1B-210ENST00000560890 ADRA2BP18089 450 aa15.64■□□□□ 0.09
APH1B-210ENST00000560890 WIZO95785 1651 aa15.6■□□□□ 0.09
APH1B-210ENST00000560890 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
APH1B-210ENST00000560890 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
APH1B-210ENST00000560890 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
APH1B-210ENST00000560890 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
APH1B-210ENST00000560890 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
APH1B-210ENST00000560890 CFTRP13569 1480 aa15.25■□□□□ 0.03
APH1B-210ENST00000560890 NESP48681 1621 aa15.23■□□□□ 0.03
APH1B-210ENST00000560890 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
APH1B-210ENST00000560890 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
APH1B-210ENST00000560890 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
APH1B-210ENST00000560890 MSH5O43196 834 aa15.11■□□□□ 0.01
APH1B-210ENST00000560890 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
APH1B-210ENST00000560890 CEP164Q9UPV0 1460 aa15.05■□□□□ -0
APH1B-210ENST00000560890 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.01
APH1B-210ENST00000560890 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
APH1B-210ENST00000560890 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
APH1B-210ENST00000560890 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
APH1B-210ENST00000560890 URB2Q14146 1524 aaKnown RBP14.89□□□□□ -0.03
APH1B-210ENST00000560890 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
APH1B-210ENST00000560890 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
APH1B-210ENST00000560890 PRDM2Q13029 1718 aa14.84□□□□□ -0.03
APH1B-210ENST00000560890 WDR62O43379 1518 aa14.84□□□□□ -0.03
APH1B-210ENST00000560890 CUX2O14529 1486 aa14.82□□□□□ -0.04
APH1B-210ENST00000560890 CUX1P39880 1505 aa14.82□□□□□ -0.04
APH1B-210ENST00000560890 DNMBPQ6XZF7 1577 aa14.82□□□□□ -0.04
APH1B-210ENST00000560890 SOGA1O94964 1423 aa14.82□□□□□ -0.04
APH1B-210ENST00000560890 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
APH1B-210ENST00000560890 FGD5Q6ZNL6 1462 aa14.77□□□□□ -0.04
APH1B-210ENST00000560890 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
APH1B-210ENST00000560890 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
APH1B-210ENST00000560890 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
APH1B-210ENST00000560890 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
APH1B-210ENST00000560890 RAD54L2Q9Y4B4 1467 aa14.73□□□□□ -0.05
APH1B-210ENST00000560890 TDRD9Q8NDG6 1382 aaKnown RBP14.71□□□□□ -0.06
APH1B-210ENST00000560890 BIVM-ERCC5R4GMW8 1640 aa14.67□□□□□ -0.06
APH1B-210ENST00000560890 ABCA10Q8WWZ4 1543 aa14.64□□□□□ -0.07
APH1B-210ENST00000560890 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.07
APH1B-210ENST00000560890 KIF27Q86VH2 1401 aa14.63□□□□□ -0.07
APH1B-210ENST00000560890 ZNF608Q9ULD9 1512 aaPredicted RBP14.62□□□□□ -0.07
APH1B-210ENST00000560890 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
APH1B-210ENST00000560890 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
APH1B-210ENST00000560890 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
APH1B-210ENST00000560890 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
APH1B-210ENST00000560890 IGF1RP08069 1367 aa14.57□□□□□ -0.08
APH1B-210ENST00000560890 GRIN2BQ13224 1484 aa14.55□□□□□ -0.08
APH1B-210ENST00000560890 FBLN2P98095 1184 aa14.54□□□□□ -0.08
APH1B-210ENST00000560890 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
APH1B-210ENST00000560890 EEA1Q15075 1411 aa14.52□□□□□ -0.08
APH1B-210ENST00000560890 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
APH1B-210ENST00000560890 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
APH1B-210ENST00000560890 CARMIL1Q5VZK9 1371 aa14.48□□□□□ -0.09
APH1B-210ENST00000560890 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
APH1B-210ENST00000560890 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
APH1B-210ENST00000560890 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
APH1B-210ENST00000560890 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
APH1B-210ENST00000560890 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
APH1B-210ENST00000560890 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
APH1B-210ENST00000560890 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
APH1B-210ENST00000560890 SYNJ2O15056 1496 aa14.4□□□□□ -0.1
APH1B-210ENST00000560890 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
APH1B-210ENST00000560890 RAPGEF2Q9Y4G8 1499 aa14.37□□□□□ -0.11
APH1B-210ENST00000560890 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
APH1B-210ENST00000560890 PRXQ9BXM0 1461 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms