RNA–Protein interactions for RNA: ENST00000560611.5

SLC12A6-218, Transcript of solute carrier family 12 member 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC12A6, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A6-218ENST00000560611 NISCHQ9Y2I1 1504 aa12.51□□□□□ -0.41
SLC12A6-218ENST00000560611 CCDC180Q9P1Z9 1646 aa11.16□□□□□ -0.62
SLC12A6-218ENST00000560611 ABCC9O60706 1549 aa10.95□□□□□ -0.66
SLC12A6-218ENST00000560611 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
SLC12A6-218ENST00000560611 RB1CC1Q8TDY2 1594 aa10.6□□□□□ -0.71
SLC12A6-218ENST00000560611 NACADO15069 1562 aa10.55□□□□□ -0.72
SLC12A6-218ENST00000560611 MYO15BQ96JP2 1530 aa10.41□□□□□ -0.74
SLC12A6-218ENST00000560611 ZCCHC6Q5VYS8 1495 aaKnown RBP10.39□□□□□ -0.75
SLC12A6-218ENST00000560611 DCAF1Q9Y4B6 1507 aa10.36□□□□□ -0.75
SLC12A6-218ENST00000560611 PABPN1Q86U42 306 aaKnown RBP eCLIP10.25□□□□□ -0.77
SLC12A6-218ENST00000560611 SCRIBQ14160 1630 aa10.19□□□□□ -0.78
SLC12A6-218ENST00000560611 SHROOM4Q9ULL8 1493 aa10.17□□□□□ -0.78
SLC12A6-218ENST00000560611 UNC13AQ9UPW8 1703 aa10.05□□□□□ -0.8
SLC12A6-218ENST00000560611 SUPT5HO00267 1087 aaKnown RBP10.04□□□□□ -0.8
SLC12A6-218ENST00000560611 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
SLC12A6-218ENST00000560611 EIF4G1Q04637 1599 aaKnown RBP9.88□□□□□ -0.83
SLC12A6-218ENST00000560611 CECR2Q9BXF3 1484 aa9.87□□□□□ -0.83
SLC12A6-218ENST00000560611 CC2D2AQ9P2K1 1620 aa9.83□□□□□ -0.84
SLC12A6-218ENST00000560611 DNAJC5BQ9UF47 199 aa9.81□□□□□ -0.84
SLC12A6-218ENST00000560611 BAZ1AQ9NRL2 1556 aaPredicted RBP9.8□□□□□ -0.84
SLC12A6-218ENST00000560611 SMARCA2P51531 1590 aa9.78□□□□□ -0.84
SLC12A6-218ENST00000560611 BAZ1BQ9UIG0 1483 aaKnown RBP9.72□□□□□ -0.85
SLC12A6-218ENST00000560611 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.85
SLC12A6-218ENST00000560611 SMARCA4P51532 1647 aa9.71□□□□□ -0.86
SLC12A6-218ENST00000560611 NCAPD3P42695 1498 aa9.67□□□□□ -0.86
SLC12A6-218ENST00000560611 PCGF6Q9BYE7 350 aa9.67□□□□□ -0.86
SLC12A6-218ENST00000560611 ATAD2BQ9ULI0 1458 aa9.66□□□□□ -0.86
SLC12A6-218ENST00000560611 HMGXB3Q12766 1538 aa9.64□□□□□ -0.87
SLC12A6-218ENST00000560611 ERCC6Q03468 1493 aa9.63□□□□□ -0.87
SLC12A6-218ENST00000560611 PELP1Q8IZL8 1130 aaKnown RBP9.61□□□□□ -0.87
SLC12A6-218ENST00000560611 MROH2BQ7Z745 1585 aa9.58□□□□□ -0.88
SLC12A6-218ENST00000560611 PEG3Q9GZU2 1588 aa9.54□□□□□ -0.88
SLC12A6-218ENST00000560611 PDS5BQ9NTI5 1447 aa9.54□□□□□ -0.88
SLC12A6-218ENST00000560611 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
SLC12A6-218ENST00000560611 TOP2AP11388 1531 aaKnown RBP9.48□□□□□ -0.89
SLC12A6-218ENST00000560611 LAMC3Q9Y6N6 1575 aa9.47□□□□□ -0.89
SLC12A6-218ENST00000560611 WIZO95785 1651 aa9.47□□□□□ -0.89
SLC12A6-218ENST00000560611 FAM9AQ8IZU1 332 aaPredicted RBP9.47□□□□□ -0.89
SLC12A6-218ENST00000560611 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.89
SLC12A6-218ENST00000560611 CENPBP07199 599 aaPredicted RBP9.43□□□□□ -0.9
SLC12A6-218ENST00000560611 TTBK1Q5TCY1 1321 aaPredicted RBP9.42□□□□□ -0.9
SLC12A6-218ENST00000560611 CUX2O14529 1486 aa9.41□□□□□ -0.9
SLC12A6-218ENST00000560611 CEP164Q9UPV0 1460 aa9.4□□□□□ -0.9
SLC12A6-218ENST00000560611 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
SLC12A6-218ENST00000560611 NESP48681 1621 aa9.36□□□□□ -0.91
SLC12A6-218ENST00000560611 APLP2Q06481 763 aa9.36□□□□□ -0.91
SLC12A6-218ENST00000560611 MRC2Q9UBG0 1479 aa9.35□□□□□ -0.91
SLC12A6-218ENST00000560611 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
SLC12A6-218ENST00000560611 ABCC8Q09428 1581 aa9.33□□□□□ -0.92
SLC12A6-218ENST00000560611 CCER1Q8TC90 406 aaPredicted RBP9.33□□□□□ -0.92
SLC12A6-218ENST00000560611 CCDC88BA6NC98 1476 aa9.32□□□□□ -0.92
SLC12A6-218ENST00000560611 CFTRP13569 1480 aa9.32□□□□□ -0.92
SLC12A6-218ENST00000560611 MYT1Q01538 1121 aa9.29□□□□□ -0.92
SLC12A6-218ENST00000560611 HRCP23327 699 aa9.28□□□□□ -0.92
SLC12A6-218ENST00000560611 ERICH6Q7L0X2 663 aa9.26□□□□□ -0.93
SLC12A6-218ENST00000560611 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
SLC12A6-218ENST00000560611 KIF21AQ7Z4S6 1674 aa9.25□□□□□ -0.93
SLC12A6-218ENST00000560611 PRDM2Q13029 1718 aa9.24□□□□□ -0.93
SLC12A6-218ENST00000560611 TRIM41Q8WV44 630 aa9.22□□□□□ -0.93
SLC12A6-218ENST00000560611 WDR62O43379 1518 aa9.2□□□□□ -0.94
SLC12A6-218ENST00000560611 THOC2Q8NI27 1593 aaKnown RBP9.2□□□□□ -0.94
SLC12A6-218ENST00000560611 IFT140Q96RY7 1462 aa9.2□□□□□ -0.94
SLC12A6-218ENST00000560611 DNMBPQ6XZF7 1577 aa9.17□□□□□ -0.94
SLC12A6-218ENST00000560611 RANGAP1P46060 587 aaPredicted RBP9.16□□□□□ -0.94
SLC12A6-218ENST00000560611 PPARGC1BQ86YN6 1023 aaKnown RBP9.16□□□□□ -0.94
SLC12A6-218ENST00000560611 FBLN2P98095 1184 aa9.15□□□□□ -0.94
SLC12A6-218ENST00000560611 TOPBP1Q92547 1522 aa9.15□□□□□ -0.94
SLC12A6-218ENST00000560611 TRIM26Q12899 539 aaPredicted RBP9.14□□□□□ -0.95
SLC12A6-218ENST00000560611 SOGA1O94964 1423 aa9.13□□□□□ -0.95
SLC12A6-218ENST00000560611 URB2Q14146 1524 aaKnown RBP9.12□□□□□ -0.95
SLC12A6-218ENST00000560611 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
SLC12A6-218ENST00000560611 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
SLC12A6-218ENST00000560611 NEFLP07196 543 aa9.11□□□□□ -0.95
SLC12A6-218ENST00000560611 CHMP7Q8WUX9 453 aaPredicted RBP9.11□□□□□ -0.95
SLC12A6-218ENST00000560611 UBTFP17480 764 aaKnown RBP9.07□□□□□ -0.96
SLC12A6-218ENST00000560611 FGD5Q6ZNL6 1462 aa9.07□□□□□ -0.96
SLC12A6-218ENST00000560611 LOC105371045A0A1W2PR82 267 aa9.07□□□□□ -0.96
SLC12A6-218ENST00000560611 DNAJC5Q9H3Z4 198 aa9.07□□□□□ -0.96
SLC12A6-218ENST00000560611 WDR97A6NE52 1622 aa9.06□□□□□ -0.96
SLC12A6-218ENST00000560611 POLA1P09884 1462 aaPredicted RBP9.05□□□□□ -0.96
SLC12A6-218ENST00000560611 GRIN2BQ13224 1484 aa9.03□□□□□ -0.96
SLC12A6-218ENST00000560611 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.96
SLC12A6-218ENST00000560611 CHIC1Q5VXU3 224 aa9.02□□□□□ -0.96
SLC12A6-218ENST00000560611 GAPVD1Q14C86 1478 aa9.01□□□□□ -0.97
SLC12A6-218ENST00000560611 KIF27Q86VH2 1401 aa9□□□□□ -0.97
SLC12A6-218ENST00000560611 CUX1P39880 1505 aa9□□□□□ -0.97
SLC12A6-218ENST00000560611 RAD54L2Q9Y4B4 1467 aa9□□□□□ -0.97
SLC12A6-218ENST00000560611 AQRO60306 1485 aaKnown RBP eCLIP8.99□□□□□ -0.97
SLC12A6-218ENST00000560611 MAGI1Q96QZ7 1491 aaPredicted RBP8.99□□□□□ -0.97
SLC12A6-218ENST00000560611 ATP1B4Q9UN42 357 aaPredicted RBP8.98□□□□□ -0.97
SLC12A6-218ENST00000560611 TOP2BQ02880 1626 aa8.98□□□□□ -0.97
SLC12A6-218ENST00000560611 EIF4G3O43432 1585 aaKnown RBP8.98□□□□□ -0.97
SLC12A6-218ENST00000560611 ABCA10Q8WWZ4 1543 aa8.97□□□□□ -0.97
SLC12A6-218ENST00000560611 ZNF608Q9ULD9 1512 aaPredicted RBP8.96□□□□□ -0.97
SLC12A6-218ENST00000560611 SYNJ1O43426 1573 aa8.96□□□□□ -0.97
SLC12A6-218ENST00000560611 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.98
SLC12A6-218ENST00000560611 BIVM-ERCC5R4GMW8 1640 aa8.95□□□□□ -0.98
SLC12A6-218ENST00000560611 SYNJ2O15056 1496 aa8.94□□□□□ -0.98
SLC12A6-218ENST00000560611 TARBP1Q13395 1621 aaKnown RBP8.93□□□□□ -0.98
SLC12A6-218ENST00000560611 FHAD1B1AJZ9 1412 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms