RNA–Protein interactions for RNA: ENST00000559982.1

TMC3-203, Transcript of transmembrane channel like 3, humanhuman

TSL 5

Gene TMC3, Length 2,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-203ENST00000559982 NISCHQ9Y2I1 1504 aa18.15■□□□□ 0.5
TMC3-203ENST00000559982 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
TMC3-203ENST00000559982 ABCC9O60706 1549 aa15.8■□□□□ 0.12
TMC3-203ENST00000559982 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
TMC3-203ENST00000559982 NACADO15069 1562 aa15.2■□□□□ 0.02
TMC3-203ENST00000559982 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
TMC3-203ENST00000559982 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
TMC3-203ENST00000559982 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
TMC3-203ENST00000559982 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
TMC3-203ENST00000559982 UNC13AQ9UPW8 1703 aa14.89□□□□□ -0.03
TMC3-203ENST00000559982 SHROOM4Q9ULL8 1493 aa14.78□□□□□ -0.04
TMC3-203ENST00000559982 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.05
TMC3-203ENST00000559982 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
TMC3-203ENST00000559982 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
TMC3-203ENST00000559982 HRCP23327 699 aa14.58□□□□□ -0.08
TMC3-203ENST00000559982 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
TMC3-203ENST00000559982 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
TMC3-203ENST00000559982 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
TMC3-203ENST00000559982 PPARGC1BQ86YN6 1023 aaKnown RBP14.36□□□□□ -0.11
TMC3-203ENST00000559982 CHIC1Q5VXU3 224 aa14.33□□□□□ -0.12
TMC3-203ENST00000559982 CC2D2AQ9P2K1 1620 aa14.31□□□□□ -0.12
TMC3-203ENST00000559982 PCGF6Q9BYE7 350 aa14.3□□□□□ -0.12
TMC3-203ENST00000559982 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
TMC3-203ENST00000559982 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
TMC3-203ENST00000559982 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
TMC3-203ENST00000559982 SMARCA2P51531 1590 aa14.02□□□□□ -0.17
TMC3-203ENST00000559982 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
TMC3-203ENST00000559982 ATAD2BQ9ULI0 1458 aa14.01□□□□□ -0.17
TMC3-203ENST00000559982 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
TMC3-203ENST00000559982 MROH2BQ7Z745 1585 aa13.98□□□□□ -0.17
TMC3-203ENST00000559982 PEG3Q9GZU2 1588 aa13.97□□□□□ -0.17
TMC3-203ENST00000559982 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
TMC3-203ENST00000559982 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
TMC3-203ENST00000559982 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
TMC3-203ENST00000559982 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
TMC3-203ENST00000559982 WIZO95785 1651 aa13.83□□□□□ -0.2
TMC3-203ENST00000559982 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
TMC3-203ENST00000559982 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.21
TMC3-203ENST00000559982 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.22
TMC3-203ENST00000559982 NESP48681 1621 aa13.67□□□□□ -0.22
TMC3-203ENST00000559982 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
TMC3-203ENST00000559982 ERCC6Q03468 1493 aa13.63□□□□□ -0.23
TMC3-203ENST00000559982 ZEB1P37275 1124 aaPredicted RBP13.6□□□□□ -0.23
TMC3-203ENST00000559982 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
TMC3-203ENST00000559982 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
TMC3-203ENST00000559982 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
TMC3-203ENST00000559982 CUX2O14529 1486 aa13.52□□□□□ -0.24
TMC3-203ENST00000559982 CFTRP13569 1480 aa13.52□□□□□ -0.25
TMC3-203ENST00000559982 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
TMC3-203ENST00000559982 THOC2Q8NI27 1593 aaKnown RBP13.51□□□□□ -0.25
TMC3-203ENST00000559982 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
TMC3-203ENST00000559982 PRDM2Q13029 1718 aa13.46□□□□□ -0.26
TMC3-203ENST00000559982 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
TMC3-203ENST00000559982 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
TMC3-203ENST00000559982 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
TMC3-203ENST00000559982 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
TMC3-203ENST00000559982 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
TMC3-203ENST00000559982 WDR62O43379 1518 aa13.4□□□□□ -0.26
TMC3-203ENST00000559982 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
TMC3-203ENST00000559982 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
TMC3-203ENST00000559982 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
TMC3-203ENST00000559982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
TMC3-203ENST00000559982 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
TMC3-203ENST00000559982 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
TMC3-203ENST00000559982 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
TMC3-203ENST00000559982 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
TMC3-203ENST00000559982 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
TMC3-203ENST00000559982 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
TMC3-203ENST00000559982 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
TMC3-203ENST00000559982 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
TMC3-203ENST00000559982 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
TMC3-203ENST00000559982 CUX1P39880 1505 aa13.13□□□□□ -0.31
TMC3-203ENST00000559982 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
TMC3-203ENST00000559982 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
TMC3-203ENST00000559982 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
TMC3-203ENST00000559982 EEA1Q15075 1411 aa13.09□□□□□ -0.31
TMC3-203ENST00000559982 ZNF608Q9ULD9 1512 aaPredicted RBP13.09□□□□□ -0.31
TMC3-203ENST00000559982 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
TMC3-203ENST00000559982 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
TMC3-203ENST00000559982 MYT1Q01538 1121 aa13.07□□□□□ -0.32
TMC3-203ENST00000559982 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
TMC3-203ENST00000559982 SOGA1O94964 1423 aa13.04□□□□□ -0.32
TMC3-203ENST00000559982 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
TMC3-203ENST00000559982 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
TMC3-203ENST00000559982 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
TMC3-203ENST00000559982 WDR97A6NE52 1622 aa13.02□□□□□ -0.32
TMC3-203ENST00000559982 TOP2BQ02880 1626 aa13.02□□□□□ -0.33
TMC3-203ENST00000559982 AQRO60306 1485 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMC3-203ENST00000559982 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
TMC3-203ENST00000559982 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
TMC3-203ENST00000559982 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
TMC3-203ENST00000559982 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
TMC3-203ENST00000559982 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.33
TMC3-203ENST00000559982 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
TMC3-203ENST00000559982 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
TMC3-203ENST00000559982 MIER1Q8N108 512 aa12.93□□□□□ -0.34
TMC3-203ENST00000559982 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
TMC3-203ENST00000559982 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
TMC3-203ENST00000559982 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
TMC3-203ENST00000559982 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms