RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
HMG20A-206ENST00000558845 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
HMG20A-206ENST00000558845 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
HMG20A-206ENST00000558845 SENP3Q9H4L4 574 aaPredicted RBP24.15■■□□□ 1.46
HMG20A-206ENST00000558845 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
HMG20A-206ENST00000558845 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
HMG20A-206ENST00000558845 FOXD1Q16676 465 aa22.54■■□□□ 1.2
HMG20A-206ENST00000558845 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
HMG20A-206ENST00000558845 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
HMG20A-206ENST00000558845 ABCC9O60706 1549 aa21.68■■□□□ 1.06
HMG20A-206ENST00000558845 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
HMG20A-206ENST00000558845 NACADO15069 1562 aa21.4■■□□□ 1.02
HMG20A-206ENST00000558845 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
HMG20A-206ENST00000558845 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
HMG20A-206ENST00000558845 MSH5O43196 834 aa21.2■□□□□ 0.98
HMG20A-206ENST00000558845 POTEDQ86YR6 584 aa21.18■□□□□ 0.98
HMG20A-206ENST00000558845 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
HMG20A-206ENST00000558845 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
HMG20A-206ENST00000558845 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
HMG20A-206ENST00000558845 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
HMG20A-206ENST00000558845 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
HMG20A-206ENST00000558845 ADRA2BP18089 450 aa20.73■□□□□ 0.91
HMG20A-206ENST00000558845 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
HMG20A-206ENST00000558845 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
HMG20A-206ENST00000558845 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.85
HMG20A-206ENST00000558845 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
HMG20A-206ENST00000558845 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
HMG20A-206ENST00000558845 RSF1Q96T23 1441 aaPredicted RBP20.09■□□□□ 0.81
HMG20A-206ENST00000558845 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
HMG20A-206ENST00000558845 MROH2BQ7Z745 1585 aa20.07■□□□□ 0.8
HMG20A-206ENST00000558845 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
HMG20A-206ENST00000558845 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
HMG20A-206ENST00000558845 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
HMG20A-206ENST00000558845 WIZO95785 1651 aa19.85■□□□□ 0.77
HMG20A-206ENST00000558845 SMARCA2P51531 1590 aa19.84■□□□□ 0.77
HMG20A-206ENST00000558845 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
HMG20A-206ENST00000558845 TOP2AP11388 1531 aaKnown RBP19.75■□□□□ 0.75
HMG20A-206ENST00000558845 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
HMG20A-206ENST00000558845 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
HMG20A-206ENST00000558845 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
HMG20A-206ENST00000558845 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
HMG20A-206ENST00000558845 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
HMG20A-206ENST00000558845 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
HMG20A-206ENST00000558845 CFTRP13569 1480 aa19.22■□□□□ 0.67
HMG20A-206ENST00000558845 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
HMG20A-206ENST00000558845 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
HMG20A-206ENST00000558845 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
HMG20A-206ENST00000558845 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
HMG20A-206ENST00000558845 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
HMG20A-206ENST00000558845 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
HMG20A-206ENST00000558845 NESP48681 1621 aa18.96■□□□□ 0.63
HMG20A-206ENST00000558845 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
HMG20A-206ENST00000558845 FANCD2Q9BXW9 1451 aa18.92■□□□□ 0.62
HMG20A-206ENST00000558845 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
HMG20A-206ENST00000558845 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
HMG20A-206ENST00000558845 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
HMG20A-206ENST00000558845 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
HMG20A-206ENST00000558845 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
HMG20A-206ENST00000558845 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
HMG20A-206ENST00000558845 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
HMG20A-206ENST00000558845 CUX1P39880 1505 aa18.79■□□□□ 0.6
HMG20A-206ENST00000558845 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
HMG20A-206ENST00000558845 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
HMG20A-206ENST00000558845 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
HMG20A-206ENST00000558845 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
HMG20A-206ENST00000558845 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
HMG20A-206ENST00000558845 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
HMG20A-206ENST00000558845 WDR62O43379 1518 aa18.64■□□□□ 0.57
HMG20A-206ENST00000558845 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
HMG20A-206ENST00000558845 EEA1Q15075 1411 aa18.61■□□□□ 0.57
HMG20A-206ENST00000558845 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
HMG20A-206ENST00000558845 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
HMG20A-206ENST00000558845 SOGA1O94964 1423 aa18.52■□□□□ 0.56
HMG20A-206ENST00000558845 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
HMG20A-206ENST00000558845 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
HMG20A-206ENST00000558845 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
HMG20A-206ENST00000558845 CUX2O14529 1486 aa18.46■□□□□ 0.55
HMG20A-206ENST00000558845 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
HMG20A-206ENST00000558845 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
HMG20A-206ENST00000558845 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
HMG20A-206ENST00000558845 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
HMG20A-206ENST00000558845 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
HMG20A-206ENST00000558845 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
HMG20A-206ENST00000558845 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
HMG20A-206ENST00000558845 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
HMG20A-206ENST00000558845 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
HMG20A-206ENST00000558845 KIF21BO75037 1637 aa18.34■□□□□ 0.53
HMG20A-206ENST00000558845 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
HMG20A-206ENST00000558845 IGF1RP08069 1367 aa18.32■□□□□ 0.52
HMG20A-206ENST00000558845 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
HMG20A-206ENST00000558845 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
HMG20A-206ENST00000558845 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
HMG20A-206ENST00000558845 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
HMG20A-206ENST00000558845 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
HMG20A-206ENST00000558845 CUL7Q14999 1698 aa18.25■□□□□ 0.51
HMG20A-206ENST00000558845 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
HMG20A-206ENST00000558845 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
HMG20A-206ENST00000558845 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
HMG20A-206ENST00000558845 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.513e-6■■■■■ 29.5
HMG20A-206ENST00000558845 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms