RNA–Protein interactions for RNA: ENST00000558598.1

RCN2-205, Transcript of reticulocalbin 2, humanhuman

TSL 2

Gene RCN2, Length 3,936 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN2-205ENST00000558598 NISCHQ9Y2I1 1504 aa17.04■□□□□ 0.32
RCN2-205ENST00000558598 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
RCN2-205ENST00000558598 ZCCHC6Q5VYS8 1495 aaKnown RBP14.42□□□□□ -0.1
RCN2-205ENST00000558598 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
RCN2-205ENST00000558598 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
RCN2-205ENST00000558598 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
RCN2-205ENST00000558598 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
RCN2-205ENST00000558598 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
RCN2-205ENST00000558598 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
RCN2-205ENST00000558598 ABCC9O60706 1549 aa13.61□□□□□ -0.23
RCN2-205ENST00000558598 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
RCN2-205ENST00000558598 NACADO15069 1562 aa13.45□□□□□ -0.26
RCN2-205ENST00000558598 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
RCN2-205ENST00000558598 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
RCN2-205ENST00000558598 CECR2Q9BXF3 1484 aa13.33□□□□□ -0.28
RCN2-205ENST00000558598 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
RCN2-205ENST00000558598 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
RCN2-205ENST00000558598 WIZO95785 1651 aa13.24□□□□□ -0.29
RCN2-205ENST00000558598 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
RCN2-205ENST00000558598 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
RCN2-205ENST00000558598 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
RCN2-205ENST00000558598 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
RCN2-205ENST00000558598 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
RCN2-205ENST00000558598 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
RCN2-205ENST00000558598 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
RCN2-205ENST00000558598 TRIM41Q8WV44 630 aa12.88□□□□□ -0.35
RCN2-205ENST00000558598 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
RCN2-205ENST00000558598 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
RCN2-205ENST00000558598 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
RCN2-205ENST00000558598 PCGF6Q9BYE7 350 aa12.85□□□□□ -0.35
RCN2-205ENST00000558598 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
RCN2-205ENST00000558598 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
RCN2-205ENST00000558598 HRCP23327 699 aa12.8□□□□□ -0.36
RCN2-205ENST00000558598 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
RCN2-205ENST00000558598 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
RCN2-205ENST00000558598 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
RCN2-205ENST00000558598 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
RCN2-205ENST00000558598 SOGA1O94964 1423 aa12.65□□□□□ -0.39
RCN2-205ENST00000558598 PPARGC1BQ86YN6 1023 aaKnown RBP12.64□□□□□ -0.39
RCN2-205ENST00000558598 SYNJ1O43426 1573 aa12.63□□□□□ -0.39
RCN2-205ENST00000558598 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
RCN2-205ENST00000558598 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
RCN2-205ENST00000558598 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
RCN2-205ENST00000558598 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
RCN2-205ENST00000558598 CEP162Q5TB80 1403 aa12.46□□□□□ -0.41
RCN2-205ENST00000558598 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
RCN2-205ENST00000558598 TOP2BQ02880 1626 aa12.45□□□□□ -0.42
RCN2-205ENST00000558598 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
RCN2-205ENST00000558598 KIF21BO75037 1637 aa12.42□□□□□ -0.42
RCN2-205ENST00000558598 EEA1Q15075 1411 aa12.42□□□□□ -0.42
RCN2-205ENST00000558598 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
RCN2-205ENST00000558598 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
RCN2-205ENST00000558598 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
RCN2-205ENST00000558598 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
RCN2-205ENST00000558598 CUX1P39880 1505 aa12.37□□□□□ -0.43
RCN2-205ENST00000558598 RAPGEF2Q9Y4G8 1499 aa12.35□□□□□ -0.43
RCN2-205ENST00000558598 CFTRP13569 1480 aa12.32□□□□□ -0.44
RCN2-205ENST00000558598 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
RCN2-205ENST00000558598 CC2D2AQ9P2K1 1620 aa12.27□□□□□ -0.44
RCN2-205ENST00000558598 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
RCN2-205ENST00000558598 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
RCN2-205ENST00000558598 TTBK1Q5TCY1 1321 aaPredicted RBP12.24□□□□□ -0.45
RCN2-205ENST00000558598 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.45
RCN2-205ENST00000558598 CLIP1P30622 1438 aa12.21□□□□□ -0.45
RCN2-205ENST00000558598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
RCN2-205ENST00000558598 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
RCN2-205ENST00000558598 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
RCN2-205ENST00000558598 ZEB1P37275 1124 aaPredicted RBP12.15□□□□□ -0.47
RCN2-205ENST00000558598 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
RCN2-205ENST00000558598 NESP48681 1621 aa12.1□□□□□ -0.47
RCN2-205ENST00000558598 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
RCN2-205ENST00000558598 KIF27Q86VH2 1401 aa12.09□□□□□ -0.47
RCN2-205ENST00000558598 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
RCN2-205ENST00000558598 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
RCN2-205ENST00000558598 IGF1RP08069 1367 aa12.06□□□□□ -0.48
RCN2-205ENST00000558598 CUX2O14529 1486 aa12.06□□□□□ -0.48
RCN2-205ENST00000558598 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
RCN2-205ENST00000558598 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
RCN2-205ENST00000558598 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
RCN2-205ENST00000558598 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
RCN2-205ENST00000558598 DNMBPQ6XZF7 1577 aa12.02□□□□□ -0.48
RCN2-205ENST00000558598 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
RCN2-205ENST00000558598 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
RCN2-205ENST00000558598 TOPBP1Q92547 1522 aa12□□□□□ -0.49
RCN2-205ENST00000558598 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
RCN2-205ENST00000558598 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
RCN2-205ENST00000558598 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
RCN2-205ENST00000558598 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.49
RCN2-205ENST00000558598 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
RCN2-205ENST00000558598 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
RCN2-205ENST00000558598 PLPPR3Q6T4P5 718 aa11.94□□□□□ -0.5
RCN2-205ENST00000558598 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
RCN2-205ENST00000558598 CTTNBP2Q8WZ74 1663 aa11.92□□□□□ -0.5
RCN2-205ENST00000558598 ABCA5Q8WWZ7 1642 aa11.92□□□□□ -0.5
RCN2-205ENST00000558598 TIAM1Q13009 1591 aa11.91□□□□□ -0.5
RCN2-205ENST00000558598 LRRIQ1Q96JM4 1722 aa11.91□□□□□ -0.5
RCN2-205ENST00000558598 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
RCN2-205ENST00000558598 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
RCN2-205ENST00000558598 CFAP43Q8NDM7 1665 aa11.9□□□□□ -0.5
RCN2-205ENST00000558598 CUL7Q14999 1698 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms