RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
TRPM1-204ENST00000557948 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
TRPM1-204ENST00000557948 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
TRPM1-204ENST00000557948 ABCC9O60706 1549 aa14.7□□□□□ -0.06
TRPM1-204ENST00000557948 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
TRPM1-204ENST00000557948 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
TRPM1-204ENST00000557948 CCDC180Q9P1Z9 1646 aa13.95□□□□□ -0.18
TRPM1-204ENST00000557948 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
TRPM1-204ENST00000557948 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
TRPM1-204ENST00000557948 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRPM1-204ENST00000557948 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
TRPM1-204ENST00000557948 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
TRPM1-204ENST00000557948 NACADO15069 1562 aa13.36□□□□□ -0.27
TRPM1-204ENST00000557948 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
TRPM1-204ENST00000557948 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
TRPM1-204ENST00000557948 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
TRPM1-204ENST00000557948 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
TRPM1-204ENST00000557948 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
TRPM1-204ENST00000557948 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
TRPM1-204ENST00000557948 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
TRPM1-204ENST00000557948 CUX2O14529 1486 aa12.99□□□□□ -0.33
TRPM1-204ENST00000557948 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
TRPM1-204ENST00000557948 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
TRPM1-204ENST00000557948 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
TRPM1-204ENST00000557948 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
TRPM1-204ENST00000557948 FOXD1Q16676 465 aa12.52□□□□□ -0.41
TRPM1-204ENST00000557948 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
TRPM1-204ENST00000557948 ADRA2BP18089 450 aa12.43□□□□□ -0.42
TRPM1-204ENST00000557948 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
TRPM1-204ENST00000557948 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
TRPM1-204ENST00000557948 NESP48681 1621 aa12.39□□□□□ -0.43
TRPM1-204ENST00000557948 ZCCHC6Q5VYS8 1495 aaKnown RBP12.35□□□□□ -0.43
TRPM1-204ENST00000557948 NCAPD3P42695 1498 aa12.32□□□□□ -0.44
TRPM1-204ENST00000557948 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
TRPM1-204ENST00000557948 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
TRPM1-204ENST00000557948 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
TRPM1-204ENST00000557948 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
TRPM1-204ENST00000557948 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.46
TRPM1-204ENST00000557948 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.46
TRPM1-204ENST00000557948 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.46
TRPM1-204ENST00000557948 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
TRPM1-204ENST00000557948 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
TRPM1-204ENST00000557948 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
TRPM1-204ENST00000557948 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
TRPM1-204ENST00000557948 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
TRPM1-204ENST00000557948 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
TRPM1-204ENST00000557948 WDR62O43379 1518 aa12.08□□□□□ -0.48
TRPM1-204ENST00000557948 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
TRPM1-204ENST00000557948 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
TRPM1-204ENST00000557948 CYB5RLQ6IPT4 315 aa12.04□□□□□ -0.48
TRPM1-204ENST00000557948 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
TRPM1-204ENST00000557948 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
TRPM1-204ENST00000557948 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
TRPM1-204ENST00000557948 KCNA4P22459 653 aa11.9□□□□□ -0.5
TRPM1-204ENST00000557948 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
TRPM1-204ENST00000557948 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
TRPM1-204ENST00000557948 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
TRPM1-204ENST00000557948 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
TRPM1-204ENST00000557948 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
TRPM1-204ENST00000557948 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
TRPM1-204ENST00000557948 CHD1O14646 1710 aa11.73□□□□□ -0.53
TRPM1-204ENST00000557948 URB2Q14146 1524 aaKnown RBP11.73□□□□□ -0.53
TRPM1-204ENST00000557948 ZNF608Q9ULD9 1512 aaPredicted RBP11.72□□□□□ -0.53
TRPM1-204ENST00000557948 PPP4R3CPQ6ZMV5 832 aa11.67□□□□□ -0.54
TRPM1-204ENST00000557948 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
TRPM1-204ENST00000557948 FBLN2P98095 1184 aa11.65□□□□□ -0.54
TRPM1-204ENST00000557948 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
TRPM1-204ENST00000557948 MROH2BQ7Z745 1585 aa11.64□□□□□ -0.55
TRPM1-204ENST00000557948 CFTRP13569 1480 aa11.61□□□□□ -0.55
TRPM1-204ENST00000557948 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
TRPM1-204ENST00000557948 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
TRPM1-204ENST00000557948 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.56
TRPM1-204ENST00000557948 CLASP1Q7Z460 1538 aa11.52□□□□□ -0.57
TRPM1-204ENST00000557948 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
TRPM1-204ENST00000557948 WIZO95785 1651 aa11.49□□□□□ -0.57
TRPM1-204ENST00000557948 GAPVD1Q14C86 1478 aa11.49□□□□□ -0.57
TRPM1-204ENST00000557948 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
TRPM1-204ENST00000557948 TOPBP1Q92547 1522 aa11.48□□□□□ -0.57
TRPM1-204ENST00000557948 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.57
TRPM1-204ENST00000557948 ERCC6L2Q5T890 1561 aa11.46□□□□□ -0.57
TRPM1-204ENST00000557948 TARBP1Q13395 1621 aaKnown RBP11.44□□□□□ -0.58
TRPM1-204ENST00000557948 FBXO41Q8TF61 875 aa11.43□□□□□ -0.58
TRPM1-204ENST00000557948 CHMP7Q8WUX9 453 aaPredicted RBP11.42□□□□□ -0.58
TRPM1-204ENST00000557948 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
TRPM1-204ENST00000557948 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
TRPM1-204ENST00000557948 LMTK3Q96Q04 1460 aa11.39□□□□□ -0.59
TRPM1-204ENST00000557948 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
TRPM1-204ENST00000557948 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
TRPM1-204ENST00000557948 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
TRPM1-204ENST00000557948 SLC4A1APQ9BWU0 796 aaKnown RBP11.36□□□□□ -0.59
TRPM1-204ENST00000557948 KDM6BO15054 1643 aa11.35□□□□□ -0.59
TRPM1-204ENST00000557948 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
TRPM1-204ENST00000557948 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
TRPM1-204ENST00000557948 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
TRPM1-204ENST00000557948 SOCS7O14512 581 aa11.31□□□□□ -0.6
TRPM1-204ENST00000557948 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
TRPM1-204ENST00000557948 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
TRPM1-204ENST00000557948 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-204ENST00000557948 MSH5O43196 834 aa11.29□□□□□ -0.6
TRPM1-204ENST00000557948 ADGRL1O94910 1474 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms