RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
GABRB3-212ENST00000557641 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
GABRB3-212ENST00000557641 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
GABRB3-212ENST00000557641 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
GABRB3-212ENST00000557641 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
GABRB3-212ENST00000557641 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
GABRB3-212ENST00000557641 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
GABRB3-212ENST00000557641 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
GABRB3-212ENST00000557641 FOXD1Q16676 465 aa19.64■□□□□ 0.73
GABRB3-212ENST00000557641 ABCC9O60706 1549 aa19.58■□□□□ 0.73
GABRB3-212ENST00000557641 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
GABRB3-212ENST00000557641 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
GABRB3-212ENST00000557641 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
GABRB3-212ENST00000557641 NACADO15069 1562 aa19.29■□□□□ 0.68
GABRB3-212ENST00000557641 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
GABRB3-212ENST00000557641 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
GABRB3-212ENST00000557641 ADRA2BP18089 450 aa18.85■□□□□ 0.61
GABRB3-212ENST00000557641 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
GABRB3-212ENST00000557641 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
GABRB3-212ENST00000557641 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
GABRB3-212ENST00000557641 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
GABRB3-212ENST00000557641 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
GABRB3-212ENST00000557641 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
GABRB3-212ENST00000557641 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
GABRB3-212ENST00000557641 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
GABRB3-212ENST00000557641 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
GABRB3-212ENST00000557641 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
GABRB3-212ENST00000557641 MSH5O43196 834 aa18.18■□□□□ 0.5
GABRB3-212ENST00000557641 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
GABRB3-212ENST00000557641 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
GABRB3-212ENST00000557641 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
GABRB3-212ENST00000557641 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.46
GABRB3-212ENST00000557641 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
GABRB3-212ENST00000557641 WIZO95785 1651 aa17.91■□□□□ 0.46
GABRB3-212ENST00000557641 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
GABRB3-212ENST00000557641 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
GABRB3-212ENST00000557641 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
GABRB3-212ENST00000557641 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
GABRB3-212ENST00000557641 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
GABRB3-212ENST00000557641 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
GABRB3-212ENST00000557641 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
GABRB3-212ENST00000557641 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
GABRB3-212ENST00000557641 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
GABRB3-212ENST00000557641 CFTRP13569 1480 aa17.34■□□□□ 0.37
GABRB3-212ENST00000557641 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
GABRB3-212ENST00000557641 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
GABRB3-212ENST00000557641 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
GABRB3-212ENST00000557641 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
GABRB3-212ENST00000557641 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
GABRB3-212ENST00000557641 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
GABRB3-212ENST00000557641 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
GABRB3-212ENST00000557641 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
GABRB3-212ENST00000557641 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
GABRB3-212ENST00000557641 NESP48681 1621 aa17.1■□□□□ 0.33
GABRB3-212ENST00000557641 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
GABRB3-212ENST00000557641 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.32
GABRB3-212ENST00000557641 TOP2BQ02880 1626 aa17■□□□□ 0.31
GABRB3-212ENST00000557641 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
GABRB3-212ENST00000557641 CUX1P39880 1505 aa16.96■□□□□ 0.31
GABRB3-212ENST00000557641 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
GABRB3-212ENST00000557641 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
GABRB3-212ENST00000557641 DNMBPQ6XZF7 1577 aa16.92■□□□□ 0.3
GABRB3-212ENST00000557641 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
GABRB3-212ENST00000557641 EEA1Q15075 1411 aa16.89■□□□□ 0.29
GABRB3-212ENST00000557641 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
GABRB3-212ENST00000557641 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
GABRB3-212ENST00000557641 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
GABRB3-212ENST00000557641 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
GABRB3-212ENST00000557641 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
GABRB3-212ENST00000557641 KCNA4P22459 653 aa16.86■□□□□ 0.29
GABRB3-212ENST00000557641 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
GABRB3-212ENST00000557641 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
GABRB3-212ENST00000557641 SOGA1O94964 1423 aa16.79■□□□□ 0.28
GABRB3-212ENST00000557641 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
GABRB3-212ENST00000557641 WDR62O43379 1518 aa16.77■□□□□ 0.28
GABRB3-212ENST00000557641 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
GABRB3-212ENST00000557641 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
GABRB3-212ENST00000557641 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
GABRB3-212ENST00000557641 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
GABRB3-212ENST00000557641 THOC2Q8NI27 1593 aaKnown RBP16.71■□□□□ 0.27
GABRB3-212ENST00000557641 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
GABRB3-212ENST00000557641 CUX2O14529 1486 aa16.69■□□□□ 0.26
GABRB3-212ENST00000557641 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
GABRB3-212ENST00000557641 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
GABRB3-212ENST00000557641 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
GABRB3-212ENST00000557641 NPM3O75607 178 aaKnown RBP16.62■□□□□ 0.25
GABRB3-212ENST00000557641 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
GABRB3-212ENST00000557641 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
GABRB3-212ENST00000557641 IGF1RP08069 1367 aa16.6■□□□□ 0.25
GABRB3-212ENST00000557641 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
GABRB3-212ENST00000557641 KIF21BO75037 1637 aa16.57■□□□□ 0.24
GABRB3-212ENST00000557641 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
GABRB3-212ENST00000557641 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
GABRB3-212ENST00000557641 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
GABRB3-212ENST00000557641 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
GABRB3-212ENST00000557641 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
GABRB3-212ENST00000557641 ABCA5Q8WWZ7 1642 aa16.55■□□□□ 0.24
GABRB3-212ENST00000557641 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
GABRB3-212ENST00000557641 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
GABRB3-212ENST00000557641 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms