RNA–Protein interactions for RNA: ENST00000557468.1

KLHL28-206, Transcript of kelch like family member 28, humanhuman

TSL 5

Gene KLHL28, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-206ENST00000557468 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
KLHL28-206ENST00000557468 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
KLHL28-206ENST00000557468 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
KLHL28-206ENST00000557468 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
KLHL28-206ENST00000557468 SENP3Q9H4L4 574 aaPredicted RBP21.48■■□□□ 1.03
KLHL28-206ENST00000557468 POTEDQ86YR6 584 aa21.41■■□□□ 1.02
KLHL28-206ENST00000557468 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
KLHL28-206ENST00000557468 ABCC9O60706 1549 aa20.52■□□□□ 0.87
KLHL28-206ENST00000557468 ZCCHC6Q5VYS8 1495 aaKnown RBP20.23■□□□□ 0.83
KLHL28-206ENST00000557468 FOXD1Q16676 465 aa20.19■□□□□ 0.82
KLHL28-206ENST00000557468 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
KLHL28-206ENST00000557468 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
KLHL28-206ENST00000557468 NACADO15069 1562 aa19.92■□□□□ 0.78
KLHL28-206ENST00000557468 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
KLHL28-206ENST00000557468 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
KLHL28-206ENST00000557468 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
KLHL28-206ENST00000557468 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
KLHL28-206ENST00000557468 MSH5O43196 834 aa19.46■□□□□ 0.71
KLHL28-206ENST00000557468 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
KLHL28-206ENST00000557468 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
KLHL28-206ENST00000557468 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
KLHL28-206ENST00000557468 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
KLHL28-206ENST00000557468 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
KLHL28-206ENST00000557468 ADRA2BP18089 450 aa19.09■□□□□ 0.65
KLHL28-206ENST00000557468 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
KLHL28-206ENST00000557468 EIF4G1Q04637 1599 aaKnown RBP18.73■□□□□ 0.59
KLHL28-206ENST00000557468 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
KLHL28-206ENST00000557468 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
KLHL28-206ENST00000557468 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
KLHL28-206ENST00000557468 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
KLHL28-206ENST00000557468 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
KLHL28-206ENST00000557468 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
KLHL28-206ENST00000557468 WIZO95785 1651 aa18.47■□□□□ 0.55
KLHL28-206ENST00000557468 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
KLHL28-206ENST00000557468 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
KLHL28-206ENST00000557468 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
KLHL28-206ENST00000557468 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
KLHL28-206ENST00000557468 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
KLHL28-206ENST00000557468 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
KLHL28-206ENST00000557468 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
KLHL28-206ENST00000557468 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
KLHL28-206ENST00000557468 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
KLHL28-206ENST00000557468 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
KLHL28-206ENST00000557468 NESP48681 1621 aa17.87■□□□□ 0.45
KLHL28-206ENST00000557468 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
KLHL28-206ENST00000557468 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
KLHL28-206ENST00000557468 CFTRP13569 1480 aa17.83■□□□□ 0.45
KLHL28-206ENST00000557468 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
KLHL28-206ENST00000557468 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
KLHL28-206ENST00000557468 PDS5BQ9NTI5 1447 aa17.69■□□□□ 0.42
KLHL28-206ENST00000557468 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
KLHL28-206ENST00000557468 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
KLHL28-206ENST00000557468 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
KLHL28-206ENST00000557468 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
KLHL28-206ENST00000557468 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
KLHL28-206ENST00000557468 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
KLHL28-206ENST00000557468 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
KLHL28-206ENST00000557468 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
KLHL28-206ENST00000557468 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
KLHL28-206ENST00000557468 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
KLHL28-206ENST00000557468 CUX1P39880 1505 aa17.48■□□□□ 0.39
KLHL28-206ENST00000557468 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
KLHL28-206ENST00000557468 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
KLHL28-206ENST00000557468 WDR62O43379 1518 aa17.46■□□□□ 0.39
KLHL28-206ENST00000557468 TOPBP1Q92547 1522 aa17.45■□□□□ 0.38
KLHL28-206ENST00000557468 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
KLHL28-206ENST00000557468 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
KLHL28-206ENST00000557468 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
KLHL28-206ENST00000557468 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
KLHL28-206ENST00000557468 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
KLHL28-206ENST00000557468 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
KLHL28-206ENST00000557468 CUX2O14529 1486 aa17.29■□□□□ 0.36
KLHL28-206ENST00000557468 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
KLHL28-206ENST00000557468 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
KLHL28-206ENST00000557468 SOGA1O94964 1423 aa17.23■□□□□ 0.35
KLHL28-206ENST00000557468 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
KLHL28-206ENST00000557468 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
KLHL28-206ENST00000557468 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
KLHL28-206ENST00000557468 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
KLHL28-206ENST00000557468 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
KLHL28-206ENST00000557468 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
KLHL28-206ENST00000557468 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
KLHL28-206ENST00000557468 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
KLHL28-206ENST00000557468 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
KLHL28-206ENST00000557468 KCNA4P22459 653 aa17.08■□□□□ 0.32
KLHL28-206ENST00000557468 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
KLHL28-206ENST00000557468 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
KLHL28-206ENST00000557468 PBRM1Q86U86 1689 aa17.06■□□□□ 0.32
KLHL28-206ENST00000557468 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
KLHL28-206ENST00000557468 GRIN2BQ13224 1484 aa17■□□□□ 0.31
KLHL28-206ENST00000557468 EEA1Q15075 1411 aa17■□□□□ 0.31
KLHL28-206ENST00000557468 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
KLHL28-206ENST00000557468 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
KLHL28-206ENST00000557468 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
KLHL28-206ENST00000557468 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
KLHL28-206ENST00000557468 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
KLHL28-206ENST00000557468 CUL7Q14999 1698 aa16.94■□□□□ 0.3
KLHL28-206ENST00000557468 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
KLHL28-206ENST00000557468 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
KLHL28-206ENST00000557468 IGF1RP08069 1367 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms