RNA–Protein interactions for RNA: ENST00000557429.1

CGRRF1-207, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 2

Gene CGRRF1, Length 2,309 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-207ENST00000557429 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.28
CGRRF1-207ENST00000557429 CHIC1Q5VXU3 224 aa12.92□□□□□ -0.34
CGRRF1-207ENST00000557429 SENP3Q9H4L4 574 aaPredicted RBP11.54□□□□□ -0.56
CGRRF1-207ENST00000557429 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
CGRRF1-207ENST00000557429 PHF23Q9BUL5 403 aaPredicted RBP11.29□□□□□ -0.6
CGRRF1-207ENST00000557429 ABCC9O60706 1549 aa10.7□□□□□ -0.7
CGRRF1-207ENST00000557429 FOXD1Q16676 465 aa10.69□□□□□ -0.7
CGRRF1-207ENST00000557429 POTEDQ86YR6 584 aa10.66□□□□□ -0.7
CGRRF1-207ENST00000557429 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
CGRRF1-207ENST00000557429 PLPPR3Q6T4P5 718 aa10.4□□□□□ -0.74
CGRRF1-207ENST00000557429 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
CGRRF1-207ENST00000557429 MSH5O43196 834 aa10.32□□□□□ -0.76
CGRRF1-207ENST00000557429 RB1CC1Q8TDY2 1594 aa10.12□□□□□ -0.79
CGRRF1-207ENST00000557429 UNC13AQ9UPW8 1703 aa10.03□□□□□ -0.8
CGRRF1-207ENST00000557429 NACADO15069 1562 aa9.98□□□□□ -0.81
CGRRF1-207ENST00000557429 PIAS4Q8N2W9 510 aaPredicted RBP9.95□□□□□ -0.82
CGRRF1-207ENST00000557429 BICRAQ9NZM4 1560 aa9.91□□□□□ -0.82
CGRRF1-207ENST00000557429 PPP6R1Q9UPN7 881 aa9.9□□□□□ -0.82
CGRRF1-207ENST00000557429 ADRA2BP18089 450 aa9.89□□□□□ -0.83
CGRRF1-207ENST00000557429 DNAJC5Q9H3Z4 198 aa9.82□□□□□ -0.84
CGRRF1-207ENST00000557429 PABPN1Q86U42 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
CGRRF1-207ENST00000557429 MYO15BQ96JP2 1530 aa9.77□□□□□ -0.84
CGRRF1-207ENST00000557429 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
CGRRF1-207ENST00000557429 SHROOM4Q9ULL8 1493 aa9.74□□□□□ -0.85
CGRRF1-207ENST00000557429 CECR2Q9BXF3 1484 aa9.71□□□□□ -0.86
CGRRF1-207ENST00000557429 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
CGRRF1-207ENST00000557429 DCAF1Q9Y4B6 1507 aa9.5□□□□□ -0.89
CGRRF1-207ENST00000557429 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
CGRRF1-207ENST00000557429 CUX2O14529 1486 aa9.48□□□□□ -0.89
CGRRF1-207ENST00000557429 SCRIBQ14160 1630 aa9.44□□□□□ -0.9
CGRRF1-207ENST00000557429 ZCCHC6Q5VYS8 1495 aaKnown RBP9.42□□□□□ -0.9
CGRRF1-207ENST00000557429 SCAF1Q9H7N4 1312 aaKnown RBP9.3□□□□□ -0.92
CGRRF1-207ENST00000557429 THOC2Q8NI27 1593 aaKnown RBP9.23□□□□□ -0.93
CGRRF1-207ENST00000557429 ERCC6Q03468 1493 aa9.22□□□□□ -0.93
CGRRF1-207ENST00000557429 NCAPD3P42695 1498 aa9.19□□□□□ -0.94
CGRRF1-207ENST00000557429 DMRT2Q9Y5R5 561 aa9.15□□□□□ -0.94
CGRRF1-207ENST00000557429 HMGXB3Q12766 1538 aa9.13□□□□□ -0.95
CGRRF1-207ENST00000557429 NESP48681 1621 aa9.12□□□□□ -0.95
CGRRF1-207ENST00000557429 KIF21AQ7Z4S6 1674 aa9.1□□□□□ -0.95
CGRRF1-207ENST00000557429 ATAD2BQ9ULI0 1458 aa9.09□□□□□ -0.95
CGRRF1-207ENST00000557429 TRIM41Q8WV44 630 aa9.09□□□□□ -0.95
CGRRF1-207ENST00000557429 PPP4R3CPQ6ZMV5 832 aa9.08□□□□□ -0.96
CGRRF1-207ENST00000557429 CACNB1Q02641 598 aaPredicted RBP9.07□□□□□ -0.96
CGRRF1-207ENST00000557429 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
CGRRF1-207ENST00000557429 SMARCA2P51531 1590 aa9.06□□□□□ -0.96
CGRRF1-207ENST00000557429 SMARCA4P51532 1647 aa9.04□□□□□ -0.96
CGRRF1-207ENST00000557429 BAZ1AQ9NRL2 1556 aaPredicted RBP9.02□□□□□ -0.97
CGRRF1-207ENST00000557429 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
CGRRF1-207ENST00000557429 PEG3Q9GZU2 1588 aa9.01□□□□□ -0.97
CGRRF1-207ENST00000557429 WDR62O43379 1518 aa8.98□□□□□ -0.97
CGRRF1-207ENST00000557429 CNKSR2Q8WXI2 1034 aa8.96□□□□□ -0.98
CGRRF1-207ENST00000557429 BAZ1BQ9UIG0 1483 aaKnown RBP8.94□□□□□ -0.98
CGRRF1-207ENST00000557429 MRC2Q9UBG0 1479 aa8.93□□□□□ -0.98
CGRRF1-207ENST00000557429 PDS5BQ9NTI5 1447 aa8.93□□□□□ -0.98
CGRRF1-207ENST00000557429 RIMBP3CA6NJZ7 1639 aa8.92□□□□□ -0.98
CGRRF1-207ENST00000557429 RIMBP3BA6NNM3 1639 aa8.92□□□□□ -0.98
CGRRF1-207ENST00000557429 RIMBP3Q9UFD9 1639 aa8.92□□□□□ -0.98
CGRRF1-207ENST00000557429 HOXD11P31277 338 aaPredicted RBP8.89□□□□□ -0.99
CGRRF1-207ENST00000557429 NCBP3Q53F19 620 aaKnown RBP8.88□□□□□ -0.99
CGRRF1-207ENST00000557429 RNF216Q9NWF9 866 aaPredicted RBP8.86□□□□□ -0.99
CGRRF1-207ENST00000557429 OSCARQ8IYS5 282 aa8.83□□□□□ -1
CGRRF1-207ENST00000557429 CADPSQ9ULU8 1353 aa8.83□□□□□ -1
CGRRF1-207ENST00000557429 ARHGEF11O15085 1522 aa8.8□□□□□ -1
CGRRF1-207ENST00000557429 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
CGRRF1-207ENST00000557429 CEP164Q9UPV0 1460 aa8.78□□□□□ -1
CGRRF1-207ENST00000557429 PRDM2Q13029 1718 aa8.75□□□□□ -1.01
CGRRF1-207ENST00000557429 URB2Q14146 1524 aaKnown RBP8.74□□□□□ -1.01
CGRRF1-207ENST00000557429 FANCD2Q9BXW9 1451 aa8.74□□□□□ -1.01
CGRRF1-207ENST00000557429 DCAF8L1A6NGE4 600 aa8.72□□□□□ -1.01
CGRRF1-207ENST00000557429 CHD1O14646 1710 aa8.7□□□□□ -1.02
CGRRF1-207ENST00000557429 CFTRP13569 1480 aa8.7□□□□□ -1.02
CGRRF1-207ENST00000557429 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
CGRRF1-207ENST00000557429 WIZO95785 1651 aa8.69□□□□□ -1.02
CGRRF1-207ENST00000557429 RNF39Q9H2S5 420 aa8.66□□□□□ -1.02
CGRRF1-207ENST00000557429 EIF4G3O43432 1585 aaKnown RBP8.65□□□□□ -1.02
CGRRF1-207ENST00000557429 ZNF608Q9ULD9 1512 aaPredicted RBP8.65□□□□□ -1.02
CGRRF1-207ENST00000557429 IFT140Q96RY7 1462 aa8.65□□□□□ -1.03
CGRRF1-207ENST00000557429 RSF1Q96T23 1441 aaPredicted RBP8.64□□□□□ -1.03
CGRRF1-207ENST00000557429 NPM3O75607 178 aaKnown RBP8.6□□□□□ -1.03
CGRRF1-207ENST00000557429 C1QBPQ07021 282 aaKnown RBP8.6□□□□□ -1.03
CGRRF1-207ENST00000557429 CYB5RLQ6IPT4 315 aa8.59□□□□□ -1.03
CGRRF1-207ENST00000557429 TARBP1Q13395 1621 aaKnown RBP8.59□□□□□ -1.03
CGRRF1-207ENST00000557429 CLASP1Q7Z460 1538 aa8.59□□□□□ -1.03
CGRRF1-207ENST00000557429 TRHP20396 242 aaPredicted RBP8.57□□□□□ -1.04
CGRRF1-207ENST00000557429 TOPBP1Q92547 1522 aa8.56□□□□□ -1.04
CGRRF1-207ENST00000557429 TOP2AP11388 1531 aaKnown RBP8.56□□□□□ -1.04
CGRRF1-207ENST00000557429 DNMBPQ6XZF7 1577 aa8.53□□□□□ -1.04
CGRRF1-207ENST00000557429 ABCC8Q09428 1581 aa8.52□□□□□ -1.05
CGRRF1-207ENST00000557429 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
CGRRF1-207ENST00000557429 AQRO60306 1485 aaKnown RBP eCLIP8.49□□□□□ -1.05
CGRRF1-207ENST00000557429 KIF13AQ9H1H9 1805 aa8.48□□□□□ -1.05
CGRRF1-207ENST00000557429 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
CGRRF1-207ENST00000557429 KCNA4P22459 653 aa8.46□□□□□ -1.05
CGRRF1-207ENST00000557429 POLA1P09884 1462 aaPredicted RBP8.44□□□□□ -1.06
CGRRF1-207ENST00000557429 SNAPC4Q5SXM2 1469 aa8.42□□□□□ -1.06
CGRRF1-207ENST00000557429 CCDC88BA6NC98 1476 aa8.41□□□□□ -1.06
CGRRF1-207ENST00000557429 MAGI1Q96QZ7 1491 aaPredicted RBP8.41□□□□□ -1.06
CGRRF1-207ENST00000557429 PBRM1Q86U86 1689 aa8.41□□□□□ -1.06
CGRRF1-207ENST00000557429 GAPVD1Q14C86 1478 aa8.41□□□□□ -1.06
CGRRF1-207ENST00000557429 ILDR1Q86SU0 546 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms