RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
MTHFD1-215ENST00000557370 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
MTHFD1-215ENST00000557370 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
MTHFD1-215ENST00000557370 ABCC9O60706 1549 aa15.05■□□□□ -0
MTHFD1-215ENST00000557370 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
MTHFD1-215ENST00000557370 SENP3Q9H4L4 574 aaPredicted RBP14.48□□□□□ -0.09
MTHFD1-215ENST00000557370 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
MTHFD1-215ENST00000557370 PHF23Q9BUL5 403 aaPredicted RBP14.15□□□□□ -0.14
MTHFD1-215ENST00000557370 DNAJC5Q9H3Z4 198 aa14.08□□□□□ -0.16
MTHFD1-215ENST00000557370 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
MTHFD1-215ENST00000557370 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
MTHFD1-215ENST00000557370 POTEDQ86YR6 584 aa13.73□□□□□ -0.21
MTHFD1-215ENST00000557370 NACADO15069 1562 aa13.66□□□□□ -0.22
MTHFD1-215ENST00000557370 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
MTHFD1-215ENST00000557370 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
MTHFD1-215ENST00000557370 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
MTHFD1-215ENST00000557370 CC2D2AQ9P2K1 1620 aa13.51□□□□□ -0.25
MTHFD1-215ENST00000557370 FOXD1Q16676 465 aa13.51□□□□□ -0.25
MTHFD1-215ENST00000557370 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
MTHFD1-215ENST00000557370 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
MTHFD1-215ENST00000557370 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-215ENST00000557370 SHROOM4Q9ULL8 1493 aa13.28□□□□□ -0.28
MTHFD1-215ENST00000557370 CUX2O14529 1486 aa13.25□□□□□ -0.29
MTHFD1-215ENST00000557370 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
MTHFD1-215ENST00000557370 ERCC6Q03468 1493 aa13.12□□□□□ -0.31
MTHFD1-215ENST00000557370 SCRIBQ14160 1630 aa13□□□□□ -0.33
MTHFD1-215ENST00000557370 MSH5O43196 834 aa12.98□□□□□ -0.33
MTHFD1-215ENST00000557370 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
MTHFD1-215ENST00000557370 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
MTHFD1-215ENST00000557370 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-215ENST00000557370 NESP48681 1621 aa12.67□□□□□ -0.38
MTHFD1-215ENST00000557370 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
MTHFD1-215ENST00000557370 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
MTHFD1-215ENST00000557370 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-215ENST00000557370 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
MTHFD1-215ENST00000557370 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-215ENST00000557370 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.41
MTHFD1-215ENST00000557370 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
MTHFD1-215ENST00000557370 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
MTHFD1-215ENST00000557370 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.42
MTHFD1-215ENST00000557370 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
MTHFD1-215ENST00000557370 HMGXB3Q12766 1538 aa12.45□□□□□ -0.42
MTHFD1-215ENST00000557370 RIMBP3CA6NJZ7 1639 aa12.44□□□□□ -0.42
MTHFD1-215ENST00000557370 RIMBP3BA6NNM3 1639 aa12.44□□□□□ -0.42
MTHFD1-215ENST00000557370 RIMBP3Q9UFD9 1639 aa12.44□□□□□ -0.42
MTHFD1-215ENST00000557370 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
MTHFD1-215ENST00000557370 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-215ENST00000557370 CYB5RLQ6IPT4 315 aa12.34□□□□□ -0.43
MTHFD1-215ENST00000557370 ARHGEF11O15085 1522 aa12.33□□□□□ -0.44
MTHFD1-215ENST00000557370 WDR62O43379 1518 aa12.33□□□□□ -0.44
MTHFD1-215ENST00000557370 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
MTHFD1-215ENST00000557370 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-215ENST00000557370 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
MTHFD1-215ENST00000557370 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
MTHFD1-215ENST00000557370 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
MTHFD1-215ENST00000557370 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
MTHFD1-215ENST00000557370 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
MTHFD1-215ENST00000557370 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
MTHFD1-215ENST00000557370 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
MTHFD1-215ENST00000557370 ADRA2BP18089 450 aa12.03□□□□□ -0.48
MTHFD1-215ENST00000557370 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-215ENST00000557370 FBLN2P98095 1184 aa12□□□□□ -0.49
MTHFD1-215ENST00000557370 URB2Q14146 1524 aaKnown RBP12□□□□□ -0.49
MTHFD1-215ENST00000557370 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
MTHFD1-215ENST00000557370 CHD1O14646 1710 aa11.97□□□□□ -0.49
MTHFD1-215ENST00000557370 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
MTHFD1-215ENST00000557370 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
MTHFD1-215ENST00000557370 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
MTHFD1-215ENST00000557370 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-215ENST00000557370 CFTRP13569 1480 aa11.88□□□□□ -0.51
MTHFD1-215ENST00000557370 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.528e-7■■■■■ 28.7
MTHFD1-215ENST00000557370 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
MTHFD1-215ENST00000557370 WIZO95785 1651 aa11.77□□□□□ -0.53
MTHFD1-215ENST00000557370 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
MTHFD1-215ENST00000557370 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
MTHFD1-215ENST00000557370 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
MTHFD1-215ENST00000557370 KDM4FA0A1W2PPD8 638 aa11.76□□□□□ -0.53
MTHFD1-215ENST00000557370 CHMP7Q8WUX9 453 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-215ENST00000557370 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
MTHFD1-215ENST00000557370 HRCP23327 699 aa11.71□□□□□ -0.53
MTHFD1-215ENST00000557370 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
MTHFD1-215ENST00000557370 ERCC6L2Q5T890 1561 aa11.69□□□□□ -0.54
MTHFD1-215ENST00000557370 SNAPC4Q5SXM2 1469 aa11.69□□□□□ -0.54
MTHFD1-215ENST00000557370 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
MTHFD1-215ENST00000557370 TARBP1Q13395 1621 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-215ENST00000557370 LMTK3Q96Q04 1460 aa11.66□□□□□ -0.54
MTHFD1-215ENST00000557370 DNMBPQ6XZF7 1577 aa11.66□□□□□ -0.54
MTHFD1-215ENST00000557370 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
MTHFD1-215ENST00000557370 HECW2Q9P2P5 1572 aa11.63□□□□□ -0.55
MTHFD1-215ENST00000557370 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-215ENST00000557370 KDM6BO15054 1643 aa11.62□□□□□ -0.55
MTHFD1-215ENST00000557370 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-215ENST00000557370 POLA1P09884 1462 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-215ENST00000557370 FAM69CQ0P6D2 419 aa11.59□□□□□ -0.55
MTHFD1-215ENST00000557370 SYNJ2O15056 1496 aa11.58□□□□□ -0.56
MTHFD1-215ENST00000557370 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
MTHFD1-215ENST00000557370 TRIM26Q12899 539 aaPredicted RBP11.57□□□□□ -0.56
MTHFD1-215ENST00000557370 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
MTHFD1-215ENST00000557370 SOGA1O94964 1423 aa11.55□□□□□ -0.56
MTHFD1-215ENST00000557370 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms