RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
PCNX1-210ENST00000555780 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
PCNX1-210ENST00000555780 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
PCNX1-210ENST00000555780 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
PCNX1-210ENST00000555780 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
PCNX1-210ENST00000555780 FOXD1Q16676 465 aa16.04■□□□□ 0.16
PCNX1-210ENST00000555780 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
PCNX1-210ENST00000555780 MSH5O43196 834 aa15.23■□□□□ 0.03
PCNX1-210ENST00000555780 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
PCNX1-210ENST00000555780 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
PCNX1-210ENST00000555780 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
PCNX1-210ENST00000555780 ADRA2BP18089 450 aa14.49□□□□□ -0.09
PCNX1-210ENST00000555780 ABCC9O60706 1549 aa14.45□□□□□ -0.1
PCNX1-210ENST00000555780 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
PCNX1-210ENST00000555780 ZCCHC6Q5VYS8 1495 aaKnown RBP13.83□□□□□ -0.2
PCNX1-210ENST00000555780 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.2
PCNX1-210ENST00000555780 NACADO15069 1562 aa13.79□□□□□ -0.2
PCNX1-210ENST00000555780 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
PCNX1-210ENST00000555780 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
PCNX1-210ENST00000555780 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
PCNX1-210ENST00000555780 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCNX1-210ENST00000555780 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
PCNX1-210ENST00000555780 UNC13AQ9UPW8 1703 aa13.51□□□□□ -0.25
PCNX1-210ENST00000555780 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
PCNX1-210ENST00000555780 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
PCNX1-210ENST00000555780 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
PCNX1-210ENST00000555780 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
PCNX1-210ENST00000555780 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
PCNX1-210ENST00000555780 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
PCNX1-210ENST00000555780 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
PCNX1-210ENST00000555780 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
PCNX1-210ENST00000555780 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
PCNX1-210ENST00000555780 CC2D2AQ9P2K1 1620 aa13.03□□□□□ -0.32
PCNX1-210ENST00000555780 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.33
PCNX1-210ENST00000555780 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
PCNX1-210ENST00000555780 SMARCA4P51532 1647 aa12.84□□□□□ -0.35
PCNX1-210ENST00000555780 MROH2BQ7Z745 1585 aa12.84□□□□□ -0.35
PCNX1-210ENST00000555780 ATAD2BQ9ULI0 1458 aa12.83□□□□□ -0.36
PCNX1-210ENST00000555780 NCAPD3P42695 1498 aa12.8□□□□□ -0.36
PCNX1-210ENST00000555780 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
PCNX1-210ENST00000555780 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
PCNX1-210ENST00000555780 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
PCNX1-210ENST00000555780 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
PCNX1-210ENST00000555780 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
PCNX1-210ENST00000555780 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
PCNX1-210ENST00000555780 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
PCNX1-210ENST00000555780 WIZO95785 1651 aa12.66□□□□□ -0.38
PCNX1-210ENST00000555780 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
PCNX1-210ENST00000555780 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
PCNX1-210ENST00000555780 NESP48681 1621 aa12.55□□□□□ -0.4
PCNX1-210ENST00000555780 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
PCNX1-210ENST00000555780 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
PCNX1-210ENST00000555780 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
PCNX1-210ENST00000555780 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
PCNX1-210ENST00000555780 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
PCNX1-210ENST00000555780 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
PCNX1-210ENST00000555780 POTEHQ6S545 545 aa12.37□□□□□ -0.43
PCNX1-210ENST00000555780 CFTRP13569 1480 aa12.35□□□□□ -0.43
PCNX1-210ENST00000555780 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
PCNX1-210ENST00000555780 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
PCNX1-210ENST00000555780 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
PCNX1-210ENST00000555780 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
PCNX1-210ENST00000555780 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
PCNX1-210ENST00000555780 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
PCNX1-210ENST00000555780 CUX2O14529 1486 aa12.23□□□□□ -0.45
PCNX1-210ENST00000555780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCNX1-210ENST00000555780 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
PCNX1-210ENST00000555780 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
PCNX1-210ENST00000555780 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
PCNX1-210ENST00000555780 WDR62O43379 1518 aa12.18□□□□□ -0.46
PCNX1-210ENST00000555780 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
PCNX1-210ENST00000555780 TOPBP1Q92547 1522 aa12.08□□□□□ -0.48
PCNX1-210ENST00000555780 CUX1P39880 1505 aa12.02□□□□□ -0.48
PCNX1-210ENST00000555780 DNMBPQ6XZF7 1577 aa12.02□□□□□ -0.49
PCNX1-210ENST00000555780 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
PCNX1-210ENST00000555780 POLA1P09884 1462 aaPredicted RBP11.99□□□□□ -0.49
PCNX1-210ENST00000555780 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
PCNX1-210ENST00000555780 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
PCNX1-210ENST00000555780 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.5
PCNX1-210ENST00000555780 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
PCNX1-210ENST00000555780 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
PCNX1-210ENST00000555780 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
PCNX1-210ENST00000555780 SOGA1O94964 1423 aa11.93□□□□□ -0.5
PCNX1-210ENST00000555780 AQRO60306 1485 aaKnown RBP eCLIP11.92□□□□□ -0.5
PCNX1-210ENST00000555780 CAPN15O75808 1086 aa11.92□□□□□ -0.5
PCNX1-210ENST00000555780 DSG3P32926 999 aa11.92□□□□□ -0.5
PCNX1-210ENST00000555780 SYNJ1O43426 1573 aa11.91□□□□□ -0.5
PCNX1-210ENST00000555780 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
PCNX1-210ENST00000555780 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
PCNX1-210ENST00000555780 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
PCNX1-210ENST00000555780 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
PCNX1-210ENST00000555780 EIF4G3O43432 1585 aaKnown RBP11.86□□□□□ -0.51
PCNX1-210ENST00000555780 TOP2BQ02880 1626 aa11.85□□□□□ -0.51
PCNX1-210ENST00000555780 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
PCNX1-210ENST00000555780 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
PCNX1-210ENST00000555780 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
PCNX1-210ENST00000555780 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
PCNX1-210ENST00000555780 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
PCNX1-210ENST00000555780 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
PCNX1-210ENST00000555780 SNAPC4Q5SXM2 1469 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms