RNA–Protein interactions for RNA: ENST00000554761.5

EFCAB11-205, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-205ENST00000554761 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
EFCAB11-205ENST00000554761 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
EFCAB11-205ENST00000554761 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
EFCAB11-205ENST00000554761 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
EFCAB11-205ENST00000554761 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
EFCAB11-205ENST00000554761 ABCC9O60706 1549 aa14.43□□□□□ -0.1
EFCAB11-205ENST00000554761 CCDC180Q9P1Z9 1646 aa14.27□□□□□ -0.12
EFCAB11-205ENST00000554761 FOXD1Q16676 465 aa14.24□□□□□ -0.13
EFCAB11-205ENST00000554761 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
EFCAB11-205ENST00000554761 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
EFCAB11-205ENST00000554761 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
EFCAB11-205ENST00000554761 NACADO15069 1562 aa13.66□□□□□ -0.22
EFCAB11-205ENST00000554761 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
EFCAB11-205ENST00000554761 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
EFCAB11-205ENST00000554761 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
EFCAB11-205ENST00000554761 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
EFCAB11-205ENST00000554761 ADRA2BP18089 450 aa13.44□□□□□ -0.26
EFCAB11-205ENST00000554761 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
EFCAB11-205ENST00000554761 DCAF1Q9Y4B6 1507 aa13.3□□□□□ -0.28
EFCAB11-205ENST00000554761 ZCCHC6Q5VYS8 1495 aaKnown RBP13.26□□□□□ -0.29
EFCAB11-205ENST00000554761 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
EFCAB11-205ENST00000554761 MSH5O43196 834 aa13.22□□□□□ -0.29
EFCAB11-205ENST00000554761 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
EFCAB11-205ENST00000554761 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
EFCAB11-205ENST00000554761 CECR2Q9BXF3 1484 aa13.06□□□□□ -0.32
EFCAB11-205ENST00000554761 SCRIBQ14160 1630 aa13□□□□□ -0.33
EFCAB11-205ENST00000554761 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
EFCAB11-205ENST00000554761 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
EFCAB11-205ENST00000554761 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
EFCAB11-205ENST00000554761 NCAPD3P42695 1498 aa12.68□□□□□ -0.38
EFCAB11-205ENST00000554761 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
EFCAB11-205ENST00000554761 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
EFCAB11-205ENST00000554761 CUX2O14529 1486 aa12.55□□□□□ -0.4
EFCAB11-205ENST00000554761 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
EFCAB11-205ENST00000554761 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
EFCAB11-205ENST00000554761 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
EFCAB11-205ENST00000554761 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
EFCAB11-205ENST00000554761 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
EFCAB11-205ENST00000554761 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
EFCAB11-205ENST00000554761 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
EFCAB11-205ENST00000554761 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
EFCAB11-205ENST00000554761 NESP48681 1621 aa12.33□□□□□ -0.44
EFCAB11-205ENST00000554761 CADPSQ9ULU8 1353 aa12.32□□□□□ -0.44
EFCAB11-205ENST00000554761 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
EFCAB11-205ENST00000554761 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
EFCAB11-205ENST00000554761 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
EFCAB11-205ENST00000554761 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
EFCAB11-205ENST00000554761 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
EFCAB11-205ENST00000554761 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
EFCAB11-205ENST00000554761 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
EFCAB11-205ENST00000554761 THOC2Q8NI27 1593 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-205ENST00000554761 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
EFCAB11-205ENST00000554761 CFTRP13569 1480 aa12.12□□□□□ -0.47
EFCAB11-205ENST00000554761 CEP164Q9UPV0 1460 aa12.1□□□□□ -0.47
EFCAB11-205ENST00000554761 FANCD2Q9BXW9 1451 aa12.09□□□□□ -0.47
EFCAB11-205ENST00000554761 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
EFCAB11-205ENST00000554761 WDR62O43379 1518 aa12.08□□□□□ -0.48
EFCAB11-205ENST00000554761 WIZO95785 1651 aa12.04□□□□□ -0.48
EFCAB11-205ENST00000554761 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
EFCAB11-205ENST00000554761 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
EFCAB11-205ENST00000554761 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
EFCAB11-205ENST00000554761 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
EFCAB11-205ENST00000554761 URB2Q14146 1524 aaKnown RBP11.92□□□□□ -0.5
EFCAB11-205ENST00000554761 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
EFCAB11-205ENST00000554761 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
EFCAB11-205ENST00000554761 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
EFCAB11-205ENST00000554761 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
EFCAB11-205ENST00000554761 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
EFCAB11-205ENST00000554761 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
EFCAB11-205ENST00000554761 FBLN2P98095 1184 aa11.77□□□□□ -0.53
EFCAB11-205ENST00000554761 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
EFCAB11-205ENST00000554761 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-205ENST00000554761 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
EFCAB11-205ENST00000554761 SOGA1O94964 1423 aa11.75□□□□□ -0.53
EFCAB11-205ENST00000554761 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
EFCAB11-205ENST00000554761 AQRO60306 1485 aaKnown RBP eCLIP11.74□□□□□ -0.53
EFCAB11-205ENST00000554761 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-205ENST00000554761 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
EFCAB11-205ENST00000554761 TDRD9Q8NDG6 1382 aaKnown RBP11.69□□□□□ -0.54
EFCAB11-205ENST00000554761 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
EFCAB11-205ENST00000554761 RAD54L2Q9Y4B4 1467 aa11.65□□□□□ -0.54
EFCAB11-205ENST00000554761 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
EFCAB11-205ENST00000554761 PRDM2Q13029 1718 aa11.64□□□□□ -0.55
EFCAB11-205ENST00000554761 EIF4G3O43432 1585 aaKnown RBP11.63□□□□□ -0.55
EFCAB11-205ENST00000554761 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
EFCAB11-205ENST00000554761 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
EFCAB11-205ENST00000554761 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
EFCAB11-205ENST00000554761 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
EFCAB11-205ENST00000554761 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
EFCAB11-205ENST00000554761 GRIN2BQ13224 1484 aa11.62□□□□□ -0.55
EFCAB11-205ENST00000554761 MAGI1Q96QZ7 1491 aaPredicted RBP11.62□□□□□ -0.55
EFCAB11-205ENST00000554761 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
EFCAB11-205ENST00000554761 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
EFCAB11-205ENST00000554761 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
EFCAB11-205ENST00000554761 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
EFCAB11-205ENST00000554761 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.56
EFCAB11-205ENST00000554761 KCNA4P22459 653 aa11.58□□□□□ -0.56
EFCAB11-205ENST00000554761 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
EFCAB11-205ENST00000554761 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
EFCAB11-205ENST00000554761 GAPVD1Q14C86 1478 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms