RNA–Protein interactions for RNA: ENST00000554501.5

ALDH6A1-205, Transcript of aldehyde dehydrogenase 6 family member A1, humanhuman

TSL 1 (best)

Gene ALDH6A1, Length 2,221 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH6A1-205ENST00000554501 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
ALDH6A1-205ENST00000554501 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.36
ALDH6A1-205ENST00000554501 SHROOM4Q9ULL8 1493 aa34.49■■■■□ 3.11
ALDH6A1-205ENST00000554501 ABCC9O60706 1549 aa34.46■■■■□ 3.11
ALDH6A1-205ENST00000554501 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
ALDH6A1-205ENST00000554501 DCAF8L2P0C7V8 631 aa34.07■■■■□ 3.05
ALDH6A1-205ENST00000554501 DCAF1Q9Y4B6 1507 aa33.96■■■■□ 3.03
ALDH6A1-205ENST00000554501 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
ALDH6A1-205ENST00000554501 MYO15BQ96JP2 1530 aa33.71■■■□□ 2.99
ALDH6A1-205ENST00000554501 NACADO15069 1562 aa33.64■■■□□ 2.98
ALDH6A1-205ENST00000554501 RB1CC1Q8TDY2 1594 aa33.45■■■□□ 2.94
ALDH6A1-205ENST00000554501 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
ALDH6A1-205ENST00000554501 CHIC1Q5VXU3 224 aa33.05■■■□□ 2.88
ALDH6A1-205ENST00000554501 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.84
ALDH6A1-205ENST00000554501 BICRAQ9NZM4 1560 aa32.5■■■□□ 2.79
ALDH6A1-205ENST00000554501 PABPN1Q86U42 306 aaKnown RBP eCLIP32.43■■■□□ 2.78
ALDH6A1-205ENST00000554501 HRCP23327 699 aa32.1■■■□□ 2.73
ALDH6A1-205ENST00000554501 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
ALDH6A1-205ENST00000554501 LOC105371045A0A1W2PR82 267 aa32.04■■■□□ 2.72
ALDH6A1-205ENST00000554501 PCGF6Q9BYE7 350 aa32■■■□□ 2.71
ALDH6A1-205ENST00000554501 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
ALDH6A1-205ENST00000554501 MROH2BQ7Z745 1585 aa31.76■■■□□ 2.67
ALDH6A1-205ENST00000554501 BAZ1AQ9NRL2 1556 aaPredicted RBP31.74■■■□□ 2.67
ALDH6A1-205ENST00000554501 SMARCA4P51532 1647 aa31.68■■■□□ 2.66
ALDH6A1-205ENST00000554501 TRIM41Q8WV44 630 aa31.58■■■□□ 2.65
ALDH6A1-205ENST00000554501 EIF4G1Q04637 1599 aaKnown RBP31.53■■■□□ 2.64
ALDH6A1-205ENST00000554501 WIZO95785 1651 aa31.48■■■□□ 2.63
ALDH6A1-205ENST00000554501 TRIM26Q12899 539 aaPredicted RBP31.44■■■□□ 2.62
ALDH6A1-205ENST00000554501 PPARGC1BQ86YN6 1023 aaKnown RBP31.39■■■□□ 2.61
ALDH6A1-205ENST00000554501 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
ALDH6A1-205ENST00000554501 FAM9AQ8IZU1 332 aaPredicted RBP31.28■■■□□ 2.6
ALDH6A1-205ENST00000554501 ATAD2BQ9ULI0 1458 aa31.27■■■□□ 2.6
ALDH6A1-205ENST00000554501 SMARCA2P51531 1590 aa31.21■■■□□ 2.59
ALDH6A1-205ENST00000554501 CC2D2AQ9P2K1 1620 aa31.18■■■□□ 2.58
ALDH6A1-205ENST00000554501 TOP2AP11388 1531 aaKnown RBP31.1■■■□□ 2.57
ALDH6A1-205ENST00000554501 NCAPD3P42695 1498 aa31.07■■■□□ 2.56
ALDH6A1-205ENST00000554501 BAZ1BQ9UIG0 1483 aaKnown RBP31.04■■■□□ 2.56
ALDH6A1-205ENST00000554501 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
ALDH6A1-205ENST00000554501 EHMT2Q96KQ7 1210 aa30.96■■■□□ 2.55
ALDH6A1-205ENST00000554501 DNAJC5BQ9UF47 199 aa30.83■■■□□ 2.53
ALDH6A1-205ENST00000554501 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
ALDH6A1-205ENST00000554501 ZEB1P37275 1124 aaPredicted RBP30.77■■■□□ 2.52
ALDH6A1-205ENST00000554501 ABCC8Q09428 1581 aa30.6■■■□□ 2.49
ALDH6A1-205ENST00000554501 SOGA1O94964 1423 aa30.37■■■□□ 2.45
ALDH6A1-205ENST00000554501 WRNQ14191 1432 aaPredicted RBP eCLIP30.27■■■□□ 2.44
ALDH6A1-205ENST00000554501 CFTRP13569 1480 aa30.26■■■□□ 2.44
ALDH6A1-205ENST00000554501 TNIKQ9UKE5 1360 aa30.24■■■□□ 2.43
ALDH6A1-205ENST00000554501 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
ALDH6A1-205ENST00000554501 EEA1Q15075 1411 aa30.23■■■□□ 2.43
ALDH6A1-205ENST00000554501 CEP162Q5TB80 1403 aa30.23■■■□□ 2.43
ALDH6A1-205ENST00000554501 CSRNP3Q8WYN3 585 aa30.23■■■□□ 2.43
ALDH6A1-205ENST00000554501 RUSC2Q8N2Y8 1516 aa30.23■■■□□ 2.43
ALDH6A1-205ENST00000554501 NESP48681 1621 aa30.15■■■□□ 2.42
ALDH6A1-205ENST00000554501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.13■■■□□ 2.41
ALDH6A1-205ENST00000554501 PRDM2Q13029 1718 aa30.07■■■□□ 2.4
ALDH6A1-205ENST00000554501 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
ALDH6A1-205ENST00000554501 UBTFP17480 764 aaKnown RBP30.06■■■□□ 2.4
ALDH6A1-205ENST00000554501 CCER1Q8TC90 406 aaPredicted RBP30.04■■■□□ 2.4
ALDH6A1-205ENST00000554501 GOLGA3Q08378 1498 aa30.01■■■□□ 2.39
ALDH6A1-205ENST00000554501 TTBK1Q5TCY1 1321 aaPredicted RBP29.97■■■□□ 2.39
ALDH6A1-205ENST00000554501 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
ALDH6A1-205ENST00000554501 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
ALDH6A1-205ENST00000554501 CEP164Q9UPV0 1460 aa29.83■■■□□ 2.37
ALDH6A1-205ENST00000554501 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
ALDH6A1-205ENST00000554501 KIF21BO75037 1637 aa29.81■■■□□ 2.36
ALDH6A1-205ENST00000554501 KIF21AQ7Z4S6 1674 aa29.77■■■□□ 2.36
ALDH6A1-205ENST00000554501 CUX1P39880 1505 aa29.71■■■□□ 2.35
ALDH6A1-205ENST00000554501 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
ALDH6A1-205ENST00000554501 CLIP1P30622 1438 aa29.67■■■□□ 2.34
ALDH6A1-205ENST00000554501 BIVM-ERCC5R4GMW8 1640 aa29.65■■■□□ 2.34
ALDH6A1-205ENST00000554501 RAPGEF2Q9Y4G8 1499 aa29.61■■■□□ 2.33
ALDH6A1-205ENST00000554501 SCAF1Q9H7N4 1312 aaKnown RBP29.58■■■□□ 2.33
ALDH6A1-205ENST00000554501 URB2Q14146 1524 aaKnown RBP29.57■■■□□ 2.32
ALDH6A1-205ENST00000554501 VPS8Q8N3P4 1428 aa29.56■■■□□ 2.32
ALDH6A1-205ENST00000554501 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
ALDH6A1-205ENST00000554501 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
ALDH6A1-205ENST00000554501 TOPBP1Q92547 1522 aa29.54■■■□□ 2.32
ALDH6A1-205ENST00000554501 DIEXFQ68CQ4 756 aaKnown RBP29.51■■■□□ 2.31
ALDH6A1-205ENST00000554501 MRC2Q9UBG0 1479 aa29.49■■■□□ 2.31
ALDH6A1-205ENST00000554501 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
ALDH6A1-205ENST00000554501 HNRNPUL2Q1KMD3 747 aaKnown RBP29.41■■■□□ 2.3
ALDH6A1-205ENST00000554501 RANGAP1P46060 587 aaPredicted RBP29.39■■■□□ 2.29
ALDH6A1-205ENST00000554501 THOC2Q8NI27 1593 aaKnown RBP29.38■■■□□ 2.29
ALDH6A1-205ENST00000554501 APLP2Q06481 763 aa29.38■■■□□ 2.29
ALDH6A1-205ENST00000554501 POLA1P09884 1462 aaPredicted RBP29.37■■■□□ 2.29
ALDH6A1-205ENST00000554501 WDR62O43379 1518 aa29.36■■■□□ 2.29
ALDH6A1-205ENST00000554501 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
ALDH6A1-205ENST00000554501 ERICH3Q5RHP9 1530 aa29.33■■■□□ 2.29
ALDH6A1-205ENST00000554501 ZNF316A6NFI3 1004 aaPredicted RBP29.31■■■□□ 2.28
ALDH6A1-205ENST00000554501 ACIN1Q9UKV3 1341 aaKnown RBP29.31■■■□□ 2.28
ALDH6A1-205ENST00000554501 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
ALDH6A1-205ENST00000554501 NEUROD1Q13562 356 aa29.25■■■□□ 2.27
ALDH6A1-205ENST00000554501 ARAP1Q96P48 1450 aa29.2■■■□□ 2.27
ALDH6A1-205ENST00000554501 CUX2O14529 1486 aa29.2■■■□□ 2.26
ALDH6A1-205ENST00000554501 KIF27Q86VH2 1401 aa29.18■■■□□ 2.26
ALDH6A1-205ENST00000554501 ABCA10Q8WWZ4 1543 aa29.16■■■□□ 2.26
ALDH6A1-205ENST00000554501 TARBP1Q13395 1621 aaKnown RBP29.15■■■□□ 2.26
ALDH6A1-205ENST00000554501 WDR97A6NE52 1622 aa29.13■■■□□ 2.25
ALDH6A1-205ENST00000554501 CENPBP07199 599 aaPredicted RBP29.09■■■□□ 2.25
ALDH6A1-205ENST00000554501 KANK4Q5T7N3 995 aaPredicted RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms