RNA–Protein interactions for RNA: ENST00000553355.1

ARID4A-211, Transcript of AT-rich interaction domain 4A, humanhuman

TSL 3

Gene ARID4A, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4A-211ENST00000553355 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
ARID4A-211ENST00000553355 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
ARID4A-211ENST00000553355 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
ARID4A-211ENST00000553355 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
ARID4A-211ENST00000553355 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
ARID4A-211ENST00000553355 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
ARID4A-211ENST00000553355 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
ARID4A-211ENST00000553355 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
ARID4A-211ENST00000553355 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
ARID4A-211ENST00000553355 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
ARID4A-211ENST00000553355 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
ARID4A-211ENST00000553355 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
ARID4A-211ENST00000553355 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.08
ARID4A-211ENST00000553355 FOXD1Q16676 465 aa14.5□□□□□ -0.09
ARID4A-211ENST00000553355 NACADO15069 1562 aa14.47□□□□□ -0.09
ARID4A-211ENST00000553355 ABCC9O60706 1549 aa14.45□□□□□ -0.1
ARID4A-211ENST00000553355 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
ARID4A-211ENST00000553355 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
ARID4A-211ENST00000553355 RSF1Q96T23 1441 aaPredicted RBP14.18□□□□□ -0.14
ARID4A-211ENST00000553355 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
ARID4A-211ENST00000553355 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
ARID4A-211ENST00000553355 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
ARID4A-211ENST00000553355 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
ARID4A-211ENST00000553355 MSH5O43196 834 aa13.89□□□□□ -0.19
ARID4A-211ENST00000553355 WIZO95785 1651 aa13.88□□□□□ -0.19
ARID4A-211ENST00000553355 SMARCA4P51532 1647 aa13.84□□□□□ -0.19
ARID4A-211ENST00000553355 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
ARID4A-211ENST00000553355 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
ARID4A-211ENST00000553355 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
ARID4A-211ENST00000553355 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
ARID4A-211ENST00000553355 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
ARID4A-211ENST00000553355 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
ARID4A-211ENST00000553355 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
ARID4A-211ENST00000553355 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
ARID4A-211ENST00000553355 HRCP23327 699 aa13.52□□□□□ -0.25
ARID4A-211ENST00000553355 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
ARID4A-211ENST00000553355 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
ARID4A-211ENST00000553355 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
ARID4A-211ENST00000553355 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.25
ARID4A-211ENST00000553355 EEA1Q15075 1411 aa13.46□□□□□ -0.26
ARID4A-211ENST00000553355 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
ARID4A-211ENST00000553355 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
ARID4A-211ENST00000553355 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
ARID4A-211ENST00000553355 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
ARID4A-211ENST00000553355 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
ARID4A-211ENST00000553355 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
ARID4A-211ENST00000553355 NCAPD3P42695 1498 aa13.31□□□□□ -0.28
ARID4A-211ENST00000553355 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
ARID4A-211ENST00000553355 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
ARID4A-211ENST00000553355 SOGA1O94964 1423 aa13.27□□□□□ -0.29
ARID4A-211ENST00000553355 KIF21BO75037 1637 aa13.25□□□□□ -0.29
ARID4A-211ENST00000553355 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
ARID4A-211ENST00000553355 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
ARID4A-211ENST00000553355 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
ARID4A-211ENST00000553355 BIVM-ERCC5R4GMW8 1640 aa13.22□□□□□ -0.29
ARID4A-211ENST00000553355 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
ARID4A-211ENST00000553355 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.29
ARID4A-211ENST00000553355 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
ARID4A-211ENST00000553355 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
ARID4A-211ENST00000553355 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
ARID4A-211ENST00000553355 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
ARID4A-211ENST00000553355 CFTRP13569 1480 aa13.13□□□□□ -0.31
ARID4A-211ENST00000553355 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
ARID4A-211ENST00000553355 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
ARID4A-211ENST00000553355 CUX1P39880 1505 aa13.06□□□□□ -0.32
ARID4A-211ENST00000553355 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
ARID4A-211ENST00000553355 CLIP1P30622 1438 aa13.02□□□□□ -0.33
ARID4A-211ENST00000553355 PRXQ9BXM0 1461 aa13.01□□□□□ -0.33
ARID4A-211ENST00000553355 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
ARID4A-211ENST00000553355 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
ARID4A-211ENST00000553355 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
ARID4A-211ENST00000553355 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
ARID4A-211ENST00000553355 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
ARID4A-211ENST00000553355 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
ARID4A-211ENST00000553355 ADRA2BP18089 450 aa12.9□□□□□ -0.34
ARID4A-211ENST00000553355 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 CUX2O14529 1486 aa12.84□□□□□ -0.35
ARID4A-211ENST00000553355 APLP2Q06481 763 aa12.83□□□□□ -0.36
ARID4A-211ENST00000553355 PLPPR3Q6T4P5 718 aa12.82□□□□□ -0.36
ARID4A-211ENST00000553355 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
ARID4A-211ENST00000553355 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
ARID4A-211ENST00000553355 IGF1RP08069 1367 aa12.78□□□□□ -0.36
ARID4A-211ENST00000553355 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
ARID4A-211ENST00000553355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
ARID4A-211ENST00000553355 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
ARID4A-211ENST00000553355 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
ARID4A-211ENST00000553355 CUL7Q14999 1698 aa12.74□□□□□ -0.37
ARID4A-211ENST00000553355 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
ARID4A-211ENST00000553355 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
ARID4A-211ENST00000553355 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
ARID4A-211ENST00000553355 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
ARID4A-211ENST00000553355 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
ARID4A-211ENST00000553355 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
ARID4A-211ENST00000553355 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
ARID4A-211ENST00000553355 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
ARID4A-211ENST00000553355 NESP48681 1621 aa12.67□□□□□ -0.38
ARID4A-211ENST00000553355 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms