RNA–Protein interactions for RNA: ENST00000553201.1

NPIPA2-203, Transcript of nuclear pore complex interacting protein family member A2, humanhuman

TSL 1 (best) BASIC

Gene NPIPA2, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2-203ENST00000553201 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
NPIPA2-203ENST00000553201 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
NPIPA2-203ENST00000553201 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
NPIPA2-203ENST00000553201 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
NPIPA2-203ENST00000553201 ABCC9O60706 1549 aa16.84■□□□□ 0.29
NPIPA2-203ENST00000553201 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
NPIPA2-203ENST00000553201 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
NPIPA2-203ENST00000553201 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
NPIPA2-203ENST00000553201 FOXD1Q16676 465 aa15.71■□□□□ 0.11
NPIPA2-203ENST00000553201 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPIPA2-203ENST00000553201 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
NPIPA2-203ENST00000553201 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
NPIPA2-203ENST00000553201 NACADO15069 1562 aa15.32■□□□□ 0.04
NPIPA2-203ENST00000553201 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
NPIPA2-203ENST00000553201 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
NPIPA2-203ENST00000553201 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
NPIPA2-203ENST00000553201 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
NPIPA2-203ENST00000553201 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
NPIPA2-203ENST00000553201 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
NPIPA2-203ENST00000553201 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
NPIPA2-203ENST00000553201 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
NPIPA2-203ENST00000553201 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
NPIPA2-203ENST00000553201 ADRA2BP18089 450 aa14.84□□□□□ -0.03
NPIPA2-203ENST00000553201 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
NPIPA2-203ENST00000553201 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
NPIPA2-203ENST00000553201 CUX2O14529 1486 aa14.69□□□□□ -0.06
NPIPA2-203ENST00000553201 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
NPIPA2-203ENST00000553201 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
NPIPA2-203ENST00000553201 MSH5O43196 834 aa14.58□□□□□ -0.08
NPIPA2-203ENST00000553201 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
NPIPA2-203ENST00000553201 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
NPIPA2-203ENST00000553201 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
NPIPA2-203ENST00000553201 NESP48681 1621 aa14.26□□□□□ -0.13
NPIPA2-203ENST00000553201 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
NPIPA2-203ENST00000553201 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
NPIPA2-203ENST00000553201 SMARCA2P51531 1590 aa14.08□□□□□ -0.16
NPIPA2-203ENST00000553201 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
NPIPA2-203ENST00000553201 OSCARQ8IYS5 282 aa14□□□□□ -0.17
NPIPA2-203ENST00000553201 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
NPIPA2-203ENST00000553201 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
NPIPA2-203ENST00000553201 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
NPIPA2-203ENST00000553201 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
NPIPA2-203ENST00000553201 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
NPIPA2-203ENST00000553201 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
NPIPA2-203ENST00000553201 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
NPIPA2-203ENST00000553201 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
NPIPA2-203ENST00000553201 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
NPIPA2-203ENST00000553201 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
NPIPA2-203ENST00000553201 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
NPIPA2-203ENST00000553201 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
NPIPA2-203ENST00000553201 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
NPIPA2-203ENST00000553201 WDR62O43379 1518 aa13.81□□□□□ -0.2
NPIPA2-203ENST00000553201 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
NPIPA2-203ENST00000553201 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
NPIPA2-203ENST00000553201 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
NPIPA2-203ENST00000553201 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
NPIPA2-203ENST00000553201 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
NPIPA2-203ENST00000553201 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
NPIPA2-203ENST00000553201 FANCD2Q9BXW9 1451 aa13.6□□□□□ -0.23
NPIPA2-203ENST00000553201 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.23
NPIPA2-203ENST00000553201 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
NPIPA2-203ENST00000553201 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
NPIPA2-203ENST00000553201 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
NPIPA2-203ENST00000553201 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
NPIPA2-203ENST00000553201 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
NPIPA2-203ENST00000553201 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
NPIPA2-203ENST00000553201 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
NPIPA2-203ENST00000553201 CFTRP13569 1480 aa13.42□□□□□ -0.26
NPIPA2-203ENST00000553201 FBLN2P98095 1184 aa13.42□□□□□ -0.26
NPIPA2-203ENST00000553201 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
NPIPA2-203ENST00000553201 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
NPIPA2-203ENST00000553201 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
NPIPA2-203ENST00000553201 WIZO95785 1651 aa13.37□□□□□ -0.27
NPIPA2-203ENST00000553201 CHD1O14646 1710 aa13.36□□□□□ -0.27
NPIPA2-203ENST00000553201 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
NPIPA2-203ENST00000553201 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPIPA2-203ENST00000553201 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
NPIPA2-203ENST00000553201 KCNA4P22459 653 aa13.22□□□□□ -0.29
NPIPA2-203ENST00000553201 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
NPIPA2-203ENST00000553201 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
NPIPA2-203ENST00000553201 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
NPIPA2-203ENST00000553201 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
NPIPA2-203ENST00000553201 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
NPIPA2-203ENST00000553201 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
NPIPA2-203ENST00000553201 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
NPIPA2-203ENST00000553201 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
NPIPA2-203ENST00000553201 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
NPIPA2-203ENST00000553201 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
NPIPA2-203ENST00000553201 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
NPIPA2-203ENST00000553201 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
NPIPA2-203ENST00000553201 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
NPIPA2-203ENST00000553201 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
NPIPA2-203ENST00000553201 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
NPIPA2-203ENST00000553201 SOGA1O94964 1423 aa13.05□□□□□ -0.32
NPIPA2-203ENST00000553201 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
NPIPA2-203ENST00000553201 ERCC6L2Q5T890 1561 aa13.02□□□□□ -0.33
NPIPA2-203ENST00000553201 MAGI1Q96QZ7 1491 aaPredicted RBP13□□□□□ -0.33
NPIPA2-203ENST00000553201 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
NPIPA2-203ENST00000553201 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
NPIPA2-203ENST00000553201 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms