RNA–Protein interactions for RNA: ENST00000553087.1

KRT6C-202, Transcript of keratin 6C, humanhuman

TSL 2

Gene KRT6C, Length 911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6C-202ENST00000553087 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
KRT6C-202ENST00000553087 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
KRT6C-202ENST00000553087 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
KRT6C-202ENST00000553087 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
KRT6C-202ENST00000553087 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
KRT6C-202ENST00000553087 POTEDQ86YR6 584 aa14.96□□□□□ -0.01
KRT6C-202ENST00000553087 FOXD1Q16676 465 aa14.84□□□□□ -0.03
KRT6C-202ENST00000553087 MSH5O43196 834 aa14.08□□□□□ -0.16
KRT6C-202ENST00000553087 ABCC9O60706 1549 aa14.03□□□□□ -0.16
KRT6C-202ENST00000553087 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
KRT6C-202ENST00000553087 PIAS4Q8N2W9 510 aaPredicted RBP13.7□□□□□ -0.22
KRT6C-202ENST00000553087 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
KRT6C-202ENST00000553087 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.28
KRT6C-202ENST00000553087 ADRA2BP18089 450 aa13.3□□□□□ -0.28
KRT6C-202ENST00000553087 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
KRT6C-202ENST00000553087 NACADO15069 1562 aa13.15□□□□□ -0.3
KRT6C-202ENST00000553087 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
KRT6C-202ENST00000553087 UNC13AQ9UPW8 1703 aa13.03□□□□□ -0.32
KRT6C-202ENST00000553087 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
KRT6C-202ENST00000553087 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
KRT6C-202ENST00000553087 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.35
KRT6C-202ENST00000553087 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
KRT6C-202ENST00000553087 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
KRT6C-202ENST00000553087 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
KRT6C-202ENST00000553087 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
KRT6C-202ENST00000553087 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
KRT6C-202ENST00000553087 SCRIBQ14160 1630 aa12.59□□□□□ -0.39
KRT6C-202ENST00000553087 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
KRT6C-202ENST00000553087 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
KRT6C-202ENST00000553087 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
KRT6C-202ENST00000553087 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
KRT6C-202ENST00000553087 DNAJC5Q9H3Z4 198 aa12.44□□□□□ -0.42
KRT6C-202ENST00000553087 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
KRT6C-202ENST00000553087 CUX2O14529 1486 aa12.26□□□□□ -0.45
KRT6C-202ENST00000553087 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
KRT6C-202ENST00000553087 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
KRT6C-202ENST00000553087 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
KRT6C-202ENST00000553087 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
KRT6C-202ENST00000553087 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
KRT6C-202ENST00000553087 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
KRT6C-202ENST00000553087 ATAD2BQ9ULI0 1458 aa11.98□□□□□ -0.49
KRT6C-202ENST00000553087 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
KRT6C-202ENST00000553087 RNF39Q9H2S5 420 aa11.97□□□□□ -0.49
KRT6C-202ENST00000553087 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
KRT6C-202ENST00000553087 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
KRT6C-202ENST00000553087 LAMC3Q9Y6N6 1575 aa11.93□□□□□ -0.5
KRT6C-202ENST00000553087 NESP48681 1621 aa11.93□□□□□ -0.5
KRT6C-202ENST00000553087 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
KRT6C-202ENST00000553087 KIF21AQ7Z4S6 1674 aa11.9□□□□□ -0.5
KRT6C-202ENST00000553087 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
KRT6C-202ENST00000553087 PDS5BQ9NTI5 1447 aa11.85□□□□□ -0.51
KRT6C-202ENST00000553087 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.52
KRT6C-202ENST00000553087 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
KRT6C-202ENST00000553087 C1QBPQ07021 282 aaKnown RBP11.73□□□□□ -0.53
KRT6C-202ENST00000553087 WDR62O43379 1518 aa11.7□□□□□ -0.54
KRT6C-202ENST00000553087 CADPSQ9ULU8 1353 aa11.68□□□□□ -0.54
KRT6C-202ENST00000553087 MROH2BQ7Z745 1585 aa11.68□□□□□ -0.54
KRT6C-202ENST00000553087 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
KRT6C-202ENST00000553087 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
KRT6C-202ENST00000553087 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
KRT6C-202ENST00000553087 WIZO95785 1651 aa11.59□□□□□ -0.55
KRT6C-202ENST00000553087 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
KRT6C-202ENST00000553087 POTEHQ6S545 545 aa11.58□□□□□ -0.56
KRT6C-202ENST00000553087 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
KRT6C-202ENST00000553087 RIMBP3CA6NJZ7 1639 aa11.53□□□□□ -0.56
KRT6C-202ENST00000553087 RIMBP3BA6NNM3 1639 aa11.53□□□□□ -0.56
KRT6C-202ENST00000553087 RIMBP3Q9UFD9 1639 aa11.53□□□□□ -0.56
KRT6C-202ENST00000553087 CFTRP13569 1480 aa11.49□□□□□ -0.57
KRT6C-202ENST00000553087 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
KRT6C-202ENST00000553087 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
KRT6C-202ENST00000553087 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
KRT6C-202ENST00000553087 ARHGEF11O15085 1522 aa11.43□□□□□ -0.58
KRT6C-202ENST00000553087 IFT140Q96RY7 1462 aa11.43□□□□□ -0.58
KRT6C-202ENST00000553087 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
KRT6C-202ENST00000553087 CHD1O14646 1710 aa11.39□□□□□ -0.59
KRT6C-202ENST00000553087 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
KRT6C-202ENST00000553087 EIF4G3O43432 1585 aaKnown RBP11.38□□□□□ -0.59
KRT6C-202ENST00000553087 ABCC8Q09428 1581 aa11.38□□□□□ -0.59
KRT6C-202ENST00000553087 CYB5RLQ6IPT4 315 aa11.35□□□□□ -0.59
KRT6C-202ENST00000553087 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
KRT6C-202ENST00000553087 CNKSR2Q8WXI2 1034 aa11.34□□□□□ -0.59
KRT6C-202ENST00000553087 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
KRT6C-202ENST00000553087 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
KRT6C-202ENST00000553087 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
KRT6C-202ENST00000553087 FBLN2P98095 1184 aa11.3□□□□□ -0.6
KRT6C-202ENST00000553087 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
KRT6C-202ENST00000553087 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
KRT6C-202ENST00000553087 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
KRT6C-202ENST00000553087 AQRO60306 1485 aaKnown RBP eCLIP11.23□□□□□ -0.61
KRT6C-202ENST00000553087 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
KRT6C-202ENST00000553087 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
KRT6C-202ENST00000553087 SUPT5HO00267 1087 aaKnown RBP11.19□□□□□ -0.62
KRT6C-202ENST00000553087 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
KRT6C-202ENST00000553087 CHMP7Q8WUX9 453 aaPredicted RBP11.17□□□□□ -0.62
KRT6C-202ENST00000553087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
KRT6C-202ENST00000553087 SNAPC4Q5SXM2 1469 aa11.16□□□□□ -0.62
KRT6C-202ENST00000553087 CLASP1Q7Z460 1538 aa11.15□□□□□ -0.62
KRT6C-202ENST00000553087 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
KRT6C-202ENST00000553087 SOGA1O94964 1423 aa11.15□□□□□ -0.62
KRT6C-202ENST00000553087 PBRM1Q86U86 1689 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms