RNA–Protein interactions for RNA: ENST00000552140.5

NPIPA3-203, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

TSL 5 BASIC

Gene NPIPA3, Length 1,053 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-203ENST00000552140 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
NPIPA3-203ENST00000552140 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
NPIPA3-203ENST00000552140 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
NPIPA3-203ENST00000552140 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
NPIPA3-203ENST00000552140 ABCC9O60706 1549 aa16.84■□□□□ 0.29
NPIPA3-203ENST00000552140 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
NPIPA3-203ENST00000552140 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
NPIPA3-203ENST00000552140 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
NPIPA3-203ENST00000552140 FOXD1Q16676 465 aa15.71■□□□□ 0.11
NPIPA3-203ENST00000552140 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPIPA3-203ENST00000552140 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
NPIPA3-203ENST00000552140 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
NPIPA3-203ENST00000552140 NACADO15069 1562 aa15.32■□□□□ 0.04
NPIPA3-203ENST00000552140 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
NPIPA3-203ENST00000552140 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
NPIPA3-203ENST00000552140 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
NPIPA3-203ENST00000552140 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
NPIPA3-203ENST00000552140 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
NPIPA3-203ENST00000552140 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
NPIPA3-203ENST00000552140 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
NPIPA3-203ENST00000552140 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
NPIPA3-203ENST00000552140 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
NPIPA3-203ENST00000552140 ADRA2BP18089 450 aa14.84□□□□□ -0.03
NPIPA3-203ENST00000552140 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
NPIPA3-203ENST00000552140 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
NPIPA3-203ENST00000552140 CUX2O14529 1486 aa14.69□□□□□ -0.06
NPIPA3-203ENST00000552140 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
NPIPA3-203ENST00000552140 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
NPIPA3-203ENST00000552140 MSH5O43196 834 aa14.58□□□□□ -0.08
NPIPA3-203ENST00000552140 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
NPIPA3-203ENST00000552140 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
NPIPA3-203ENST00000552140 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
NPIPA3-203ENST00000552140 NESP48681 1621 aa14.26□□□□□ -0.13
NPIPA3-203ENST00000552140 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
NPIPA3-203ENST00000552140 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
NPIPA3-203ENST00000552140 SMARCA2P51531 1590 aa14.08□□□□□ -0.16
NPIPA3-203ENST00000552140 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
NPIPA3-203ENST00000552140 OSCARQ8IYS5 282 aa14□□□□□ -0.17
NPIPA3-203ENST00000552140 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
NPIPA3-203ENST00000552140 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
NPIPA3-203ENST00000552140 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
NPIPA3-203ENST00000552140 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
NPIPA3-203ENST00000552140 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
NPIPA3-203ENST00000552140 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
NPIPA3-203ENST00000552140 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
NPIPA3-203ENST00000552140 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
NPIPA3-203ENST00000552140 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
NPIPA3-203ENST00000552140 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
NPIPA3-203ENST00000552140 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
NPIPA3-203ENST00000552140 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
NPIPA3-203ENST00000552140 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
NPIPA3-203ENST00000552140 WDR62O43379 1518 aa13.81□□□□□ -0.2
NPIPA3-203ENST00000552140 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
NPIPA3-203ENST00000552140 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
NPIPA3-203ENST00000552140 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
NPIPA3-203ENST00000552140 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
NPIPA3-203ENST00000552140 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
NPIPA3-203ENST00000552140 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
NPIPA3-203ENST00000552140 FANCD2Q9BXW9 1451 aa13.6□□□□□ -0.23
NPIPA3-203ENST00000552140 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.23
NPIPA3-203ENST00000552140 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
NPIPA3-203ENST00000552140 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
NPIPA3-203ENST00000552140 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
NPIPA3-203ENST00000552140 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
NPIPA3-203ENST00000552140 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
NPIPA3-203ENST00000552140 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
NPIPA3-203ENST00000552140 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
NPIPA3-203ENST00000552140 CFTRP13569 1480 aa13.42□□□□□ -0.26
NPIPA3-203ENST00000552140 FBLN2P98095 1184 aa13.42□□□□□ -0.26
NPIPA3-203ENST00000552140 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
NPIPA3-203ENST00000552140 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
NPIPA3-203ENST00000552140 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
NPIPA3-203ENST00000552140 WIZO95785 1651 aa13.37□□□□□ -0.27
NPIPA3-203ENST00000552140 CHD1O14646 1710 aa13.36□□□□□ -0.27
NPIPA3-203ENST00000552140 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
NPIPA3-203ENST00000552140 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPIPA3-203ENST00000552140 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
NPIPA3-203ENST00000552140 KCNA4P22459 653 aa13.22□□□□□ -0.29
NPIPA3-203ENST00000552140 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
NPIPA3-203ENST00000552140 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
NPIPA3-203ENST00000552140 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
NPIPA3-203ENST00000552140 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
NPIPA3-203ENST00000552140 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
NPIPA3-203ENST00000552140 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
NPIPA3-203ENST00000552140 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
NPIPA3-203ENST00000552140 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
NPIPA3-203ENST00000552140 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
NPIPA3-203ENST00000552140 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
NPIPA3-203ENST00000552140 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
NPIPA3-203ENST00000552140 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
NPIPA3-203ENST00000552140 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
NPIPA3-203ENST00000552140 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
NPIPA3-203ENST00000552140 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
NPIPA3-203ENST00000552140 SOGA1O94964 1423 aa13.05□□□□□ -0.32
NPIPA3-203ENST00000552140 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
NPIPA3-203ENST00000552140 ERCC6L2Q5T890 1561 aa13.02□□□□□ -0.33
NPIPA3-203ENST00000552140 MAGI1Q96QZ7 1491 aaPredicted RBP13□□□□□ -0.33
NPIPA3-203ENST00000552140 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
NPIPA3-203ENST00000552140 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
NPIPA3-203ENST00000552140 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms