RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
USP44-206ENST00000551837 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
USP44-206ENST00000551837 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
USP44-206ENST00000551837 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
USP44-206ENST00000551837 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
USP44-206ENST00000551837 ABCC9O60706 1549 aa14.88□□□□□ -0.03
USP44-206ENST00000551837 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
USP44-206ENST00000551837 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
USP44-206ENST00000551837 MYO15BQ96JP2 1530 aa14.74□□□□□ -0.05
USP44-206ENST00000551837 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
USP44-206ENST00000551837 NACADO15069 1562 aa14.63□□□□□ -0.07
USP44-206ENST00000551837 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.08
USP44-206ENST00000551837 RB1CC1Q8TDY2 1594 aa14.51□□□□□ -0.09
USP44-206ENST00000551837 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
USP44-206ENST00000551837 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
USP44-206ENST00000551837 BICRAQ9NZM4 1560 aa14.04□□□□□ -0.16
USP44-206ENST00000551837 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP44-206ENST00000551837 UNC13AQ9UPW8 1703 aa14.02□□□□□ -0.16
USP44-206ENST00000551837 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
USP44-206ENST00000551837 FOXD1Q16676 465 aa13.9□□□□□ -0.18
USP44-206ENST00000551837 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
USP44-206ENST00000551837 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
USP44-206ENST00000551837 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
USP44-206ENST00000551837 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
USP44-206ENST00000551837 EIF4G1Q04637 1599 aaKnown RBP13.63□□□□□ -0.23
USP44-206ENST00000551837 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
USP44-206ENST00000551837 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
USP44-206ENST00000551837 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
USP44-206ENST00000551837 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
USP44-206ENST00000551837 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
USP44-206ENST00000551837 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
USP44-206ENST00000551837 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
USP44-206ENST00000551837 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
USP44-206ENST00000551837 WIZO95785 1651 aa13.45□□□□□ -0.26
USP44-206ENST00000551837 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
USP44-206ENST00000551837 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
USP44-206ENST00000551837 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
USP44-206ENST00000551837 MSH5O43196 834 aa13.29□□□□□ -0.28
USP44-206ENST00000551837 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
USP44-206ENST00000551837 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
USP44-206ENST00000551837 CFTRP13569 1480 aa13.14□□□□□ -0.31
USP44-206ENST00000551837 LAMC3Q9Y6N6 1575 aa13.05□□□□□ -0.32
USP44-206ENST00000551837 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.33
USP44-206ENST00000551837 NESP48681 1621 aa12.98□□□□□ -0.33
USP44-206ENST00000551837 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
USP44-206ENST00000551837 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
USP44-206ENST00000551837 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
USP44-206ENST00000551837 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
USP44-206ENST00000551837 CEP164Q9UPV0 1460 aa12.86□□□□□ -0.35
USP44-206ENST00000551837 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
USP44-206ENST00000551837 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
USP44-206ENST00000551837 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
USP44-206ENST00000551837 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
USP44-206ENST00000551837 CUX1P39880 1505 aa12.76□□□□□ -0.37
USP44-206ENST00000551837 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
USP44-206ENST00000551837 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
USP44-206ENST00000551837 TOP2BQ02880 1626 aa12.75□□□□□ -0.37
USP44-206ENST00000551837 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
USP44-206ENST00000551837 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
USP44-206ENST00000551837 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
USP44-206ENST00000551837 WDR62O43379 1518 aa12.72□□□□□ -0.37
USP44-206ENST00000551837 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
USP44-206ENST00000551837 SOGA1O94964 1423 aa12.7□□□□□ -0.38
USP44-206ENST00000551837 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
USP44-206ENST00000551837 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
USP44-206ENST00000551837 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
USP44-206ENST00000551837 CUX2O14529 1486 aa12.64□□□□□ -0.39
USP44-206ENST00000551837 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
USP44-206ENST00000551837 EEA1Q15075 1411 aa12.62□□□□□ -0.39
USP44-206ENST00000551837 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
USP44-206ENST00000551837 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
USP44-206ENST00000551837 KIF27Q86VH2 1401 aa12.6□□□□□ -0.39
USP44-206ENST00000551837 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
USP44-206ENST00000551837 IGF1RP08069 1367 aa12.56□□□□□ -0.4
USP44-206ENST00000551837 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
USP44-206ENST00000551837 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
USP44-206ENST00000551837 PPP6R1Q9UPN7 881 aa12.54□□□□□ -0.4
USP44-206ENST00000551837 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
USP44-206ENST00000551837 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
USP44-206ENST00000551837 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
USP44-206ENST00000551837 ADRA2BP18089 450 aa12.5□□□□□ -0.41
USP44-206ENST00000551837 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
USP44-206ENST00000551837 ZNF608Q9ULD9 1512 aaPredicted RBP12.48□□□□□ -0.41
USP44-206ENST00000551837 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
USP44-206ENST00000551837 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
USP44-206ENST00000551837 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
USP44-206ENST00000551837 CARMIL1Q5VZK9 1371 aa12.45□□□□□ -0.42
USP44-206ENST00000551837 ABCA5Q8WWZ7 1642 aa12.45□□□□□ -0.42
USP44-206ENST00000551837 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
USP44-206ENST00000551837 PRXQ9BXM0 1461 aa12.45□□□□□ -0.42
USP44-206ENST00000551837 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
USP44-206ENST00000551837 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.43
USP44-206ENST00000551837 RAPGEF2Q9Y4G8 1499 aa12.39□□□□□ -0.43
USP44-206ENST00000551837 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
USP44-206ENST00000551837 CHMP7Q8WUX9 453 aaPredicted RBP12.37□□□□□ -0.43
USP44-206ENST00000551837 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
USP44-206ENST00000551837 CUL7Q14999 1698 aa12.35□□□□□ -0.43
USP44-206ENST00000551837 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
USP44-206ENST00000551837 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
USP44-206ENST00000551837 KIF21BO75037 1637 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms