RNA–Protein interactions for RNA: ENST00000551328.2

PSMC6-203, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-203ENST00000551328 AEBP2Q6ZN18 517 aaPredicted RBP33.61■■■□□ 2.97
PSMC6-203ENST00000551328 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
PSMC6-203ENST00000551328 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
PSMC6-203ENST00000551328 SENP3Q9H4L4 574 aaPredicted RBP28.68■■■□□ 2.18
PSMC6-203ENST00000551328 PHF23Q9BUL5 403 aaPredicted RBP28.29■■■□□ 2.12
PSMC6-203ENST00000551328 ABCC9O60706 1549 aa26.9■■□□□ 1.9
PSMC6-203ENST00000551328 FOXD1Q16676 465 aa26.84■■□□□ 1.89
PSMC6-203ENST00000551328 CCDC180Q9P1Z9 1646 aa26.35■■□□□ 1.81
PSMC6-203ENST00000551328 DNAJC5BQ9UF47 199 aa25.8■■□□□ 1.72
PSMC6-203ENST00000551328 POTEDQ86YR6 584 aa25.57■■□□□ 1.68
PSMC6-203ENST00000551328 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
PSMC6-203ENST00000551328 MSH5O43196 834 aa25.25■■□□□ 1.63
PSMC6-203ENST00000551328 NACADO15069 1562 aa25.02■■□□□ 1.6
PSMC6-203ENST00000551328 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
PSMC6-203ENST00000551328 PIAS4Q8N2W9 510 aaPredicted RBP24.93■■□□□ 1.58
PSMC6-203ENST00000551328 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
PSMC6-203ENST00000551328 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
PSMC6-203ENST00000551328 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
PSMC6-203ENST00000551328 PPP6R1Q9UPN7 881 aa24.75■■□□□ 1.55
PSMC6-203ENST00000551328 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
PSMC6-203ENST00000551328 ADRA2BP18089 450 aa24.63■■□□□ 1.53
PSMC6-203ENST00000551328 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
PSMC6-203ENST00000551328 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
PSMC6-203ENST00000551328 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
PSMC6-203ENST00000551328 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
PSMC6-203ENST00000551328 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
PSMC6-203ENST00000551328 ZCCHC6Q5VYS8 1495 aaKnown RBP24.06■■□□□ 1.44
PSMC6-203ENST00000551328 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
PSMC6-203ENST00000551328 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
PSMC6-203ENST00000551328 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
PSMC6-203ENST00000551328 CUX2O14529 1486 aa23.33■■□□□ 1.33
PSMC6-203ENST00000551328 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
PSMC6-203ENST00000551328 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
PSMC6-203ENST00000551328 NESP48681 1621 aa23.01■■□□□ 1.27
PSMC6-203ENST00000551328 ATAD2BQ9ULI0 1458 aa23.01■■□□□ 1.27
PSMC6-203ENST00000551328 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
PSMC6-203ENST00000551328 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
PSMC6-203ENST00000551328 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
PSMC6-203ENST00000551328 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
PSMC6-203ENST00000551328 MAPK8IP2Q13387 824 aaPredicted RBP22.81■■□□□ 1.24
PSMC6-203ENST00000551328 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
PSMC6-203ENST00000551328 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
PSMC6-203ENST00000551328 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
PSMC6-203ENST00000551328 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
PSMC6-203ENST00000551328 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
PSMC6-203ENST00000551328 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
PSMC6-203ENST00000551328 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
PSMC6-203ENST00000551328 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
PSMC6-203ENST00000551328 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
PSMC6-203ENST00000551328 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
PSMC6-203ENST00000551328 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
PSMC6-203ENST00000551328 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
PSMC6-203ENST00000551328 WDR62O43379 1518 aa22.38■■□□□ 1.17
PSMC6-203ENST00000551328 WIZO95785 1651 aa22.21■■□□□ 1.15
PSMC6-203ENST00000551328 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
PSMC6-203ENST00000551328 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
PSMC6-203ENST00000551328 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
PSMC6-203ENST00000551328 CFTRP13569 1480 aa22.06■■□□□ 1.12
PSMC6-203ENST00000551328 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
PSMC6-203ENST00000551328 CACNB1Q02641 598 aaPredicted RBP22.03■■□□□ 1.12
PSMC6-203ENST00000551328 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.11
PSMC6-203ENST00000551328 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.11
PSMC6-203ENST00000551328 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.11
PSMC6-203ENST00000551328 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
PSMC6-203ENST00000551328 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
PSMC6-203ENST00000551328 TOP2AP11388 1531 aaKnown RBP21.84■■□□□ 1.09
PSMC6-203ENST00000551328 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
PSMC6-203ENST00000551328 DCAF8L1A6NGE4 600 aa21.81■■□□□ 1.08
PSMC6-203ENST00000551328 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
PSMC6-203ENST00000551328 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
PSMC6-203ENST00000551328 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
PSMC6-203ENST00000551328 PPP4R3CPQ6ZMV5 832 aa21.73■■□□□ 1.07
PSMC6-203ENST00000551328 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
PSMC6-203ENST00000551328 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
PSMC6-203ENST00000551328 ARAP1Q96P48 1450 aa21.64■■□□□ 1.06
PSMC6-203ENST00000551328 CHD1O14646 1710 aa21.64■■□□□ 1.06
PSMC6-203ENST00000551328 HOXD11P31277 338 aaPredicted RBP21.64■■□□□ 1.05
PSMC6-203ENST00000551328 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.05
PSMC6-203ENST00000551328 TRHP20396 242 aaPredicted RBP21.63■■□□□ 1.05
PSMC6-203ENST00000551328 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
PSMC6-203ENST00000551328 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
PSMC6-203ENST00000551328 DNMBPQ6XZF7 1577 aa21.54■■□□□ 1.04
PSMC6-203ENST00000551328 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
PSMC6-203ENST00000551328 RNF39Q9H2S5 420 aa21.53■■□□□ 1.04
PSMC6-203ENST00000551328 FBLN2P98095 1184 aa21.5■■□□□ 1.03
PSMC6-203ENST00000551328 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
PSMC6-203ENST00000551328 CNKSR2Q8WXI2 1034 aa21.41■■□□□ 1.02
PSMC6-203ENST00000551328 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
PSMC6-203ENST00000551328 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
PSMC6-203ENST00000551328 CLASP1Q7Z460 1538 aa21.38■■□□□ 1.01
PSMC6-203ENST00000551328 RNF216Q9NWF9 866 aaPredicted RBP21.34■■□□□ 1.01
PSMC6-203ENST00000551328 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
PSMC6-203ENST00000551328 SOGA1O94964 1423 aa21.32■■□□□ 1
PSMC6-203ENST00000551328 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
PSMC6-203ENST00000551328 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
PSMC6-203ENST00000551328 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
PSMC6-203ENST00000551328 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
PSMC6-203ENST00000551328 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
PSMC6-203ENST00000551328 C1QBPQ07021 282 aaKnown RBP21.17■□□□□ 0.98
PSMC6-203ENST00000551328 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms