RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, humanhuman

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-208ENST00000550811 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
TUBA1A-208ENST00000550811 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
TUBA1A-208ENST00000550811 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
TUBA1A-208ENST00000550811 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
TUBA1A-208ENST00000550811 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
TUBA1A-208ENST00000550811 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
TUBA1A-208ENST00000550811 POTEDQ86YR6 584 aa19.62■□□□□ 0.73
TUBA1A-208ENST00000550811 ABCC9O60706 1549 aa19.03■□□□□ 0.64
TUBA1A-208ENST00000550811 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
TUBA1A-208ENST00000550811 ZCCHC6Q5VYS8 1495 aaKnown RBP18.83■□□□□ 0.6
TUBA1A-208ENST00000550811 FOXD1Q16676 465 aa18.65■□□□□ 0.58
TUBA1A-208ENST00000550811 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
TUBA1A-208ENST00000550811 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
TUBA1A-208ENST00000550811 NACADO15069 1562 aa18.56■□□□□ 0.56
TUBA1A-208ENST00000550811 DCAF8L2P0C7V8 631 aa18.53■□□□□ 0.56
TUBA1A-208ENST00000550811 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
TUBA1A-208ENST00000550811 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
TUBA1A-208ENST00000550811 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
TUBA1A-208ENST00000550811 MSH5O43196 834 aa17.96■□□□□ 0.47
TUBA1A-208ENST00000550811 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
TUBA1A-208ENST00000550811 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
TUBA1A-208ENST00000550811 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
TUBA1A-208ENST00000550811 ADRA2BP18089 450 aa17.48■□□□□ 0.39
TUBA1A-208ENST00000550811 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
TUBA1A-208ENST00000550811 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
TUBA1A-208ENST00000550811 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
TUBA1A-208ENST00000550811 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
TUBA1A-208ENST00000550811 KCNA4P22459 653 aa17.35■□□□□ 0.37
TUBA1A-208ENST00000550811 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
TUBA1A-208ENST00000550811 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
TUBA1A-208ENST00000550811 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
TUBA1A-208ENST00000550811 CC2D2AQ9P2K1 1620 aa17.26■□□□□ 0.35
TUBA1A-208ENST00000550811 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
TUBA1A-208ENST00000550811 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
TUBA1A-208ENST00000550811 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
TUBA1A-208ENST00000550811 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
TUBA1A-208ENST00000550811 WIZO95785 1651 aa17.17■□□□□ 0.34
TUBA1A-208ENST00000550811 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
TUBA1A-208ENST00000550811 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
TUBA1A-208ENST00000550811 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
TUBA1A-208ENST00000550811 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
TUBA1A-208ENST00000550811 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
TUBA1A-208ENST00000550811 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
TUBA1A-208ENST00000550811 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
TUBA1A-208ENST00000550811 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
TUBA1A-208ENST00000550811 CCDC88BA6NC98 1476 aa16.77■□□□□ 0.28
TUBA1A-208ENST00000550811 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
TUBA1A-208ENST00000550811 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
TUBA1A-208ENST00000550811 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
TUBA1A-208ENST00000550811 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
TUBA1A-208ENST00000550811 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
TUBA1A-208ENST00000550811 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
TUBA1A-208ENST00000550811 CFTRP13569 1480 aa16.6■□□□□ 0.25
TUBA1A-208ENST00000550811 NESP48681 1621 aa16.57■□□□□ 0.24
TUBA1A-208ENST00000550811 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.23
TUBA1A-208ENST00000550811 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
TUBA1A-208ENST00000550811 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
TUBA1A-208ENST00000550811 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
TUBA1A-208ENST00000550811 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
TUBA1A-208ENST00000550811 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
TUBA1A-208ENST00000550811 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
TUBA1A-208ENST00000550811 MRC2Q9UBG0 1479 aa16.3■□□□□ 0.2
TUBA1A-208ENST00000550811 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
TUBA1A-208ENST00000550811 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
TUBA1A-208ENST00000550811 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
TUBA1A-208ENST00000550811 WDR62O43379 1518 aa16.25■□□□□ 0.19
TUBA1A-208ENST00000550811 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
TUBA1A-208ENST00000550811 CUX1P39880 1505 aa16.24■□□□□ 0.19
TUBA1A-208ENST00000550811 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
TUBA1A-208ENST00000550811 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
TUBA1A-208ENST00000550811 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
TUBA1A-208ENST00000550811 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
TUBA1A-208ENST00000550811 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
TUBA1A-208ENST00000550811 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
TUBA1A-208ENST00000550811 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
TUBA1A-208ENST00000550811 FGD5Q6ZNL6 1462 aa16.13■□□□□ 0.17
TUBA1A-208ENST00000550811 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
TUBA1A-208ENST00000550811 CUX2O14529 1486 aa16.1■□□□□ 0.17
TUBA1A-208ENST00000550811 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
TUBA1A-208ENST00000550811 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
TUBA1A-208ENST00000550811 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
TUBA1A-208ENST00000550811 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
TUBA1A-208ENST00000550811 RAD54L2Q9Y4B4 1467 aa16.01■□□□□ 0.15
TUBA1A-208ENST00000550811 SOGA1O94964 1423 aa16.01■□□□□ 0.15
TUBA1A-208ENST00000550811 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
TUBA1A-208ENST00000550811 EIF4G3O43432 1585 aaKnown RBP15.93■□□□□ 0.14
TUBA1A-208ENST00000550811 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
TUBA1A-208ENST00000550811 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
TUBA1A-208ENST00000550811 ZBTB22O15209 634 aa15.89■□□□□ 0.13
TUBA1A-208ENST00000550811 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
TUBA1A-208ENST00000550811 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
TUBA1A-208ENST00000550811 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
TUBA1A-208ENST00000550811 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
TUBA1A-208ENST00000550811 EEA1Q15075 1411 aa15.85■□□□□ 0.13
TUBA1A-208ENST00000550811 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
TUBA1A-208ENST00000550811 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
TUBA1A-208ENST00000550811 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
TUBA1A-208ENST00000550811 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
TUBA1A-208ENST00000550811 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
TUBA1A-208ENST00000550811 CUL7Q14999 1698 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms