RNA–Protein interactions for RNA: ENST00000549585.1

ATP2B1-205, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 874 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-205ENST00000549585 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
ATP2B1-205ENST00000549585 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
ATP2B1-205ENST00000549585 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
ATP2B1-205ENST00000549585 ABCC9O60706 1549 aa19.29■□□□□ 0.68
ATP2B1-205ENST00000549585 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
ATP2B1-205ENST00000549585 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
ATP2B1-205ENST00000549585 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
ATP2B1-205ENST00000549585 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
ATP2B1-205ENST00000549585 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
ATP2B1-205ENST00000549585 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
ATP2B1-205ENST00000549585 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
ATP2B1-205ENST00000549585 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
ATP2B1-205ENST00000549585 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
ATP2B1-205ENST00000549585 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
ATP2B1-205ENST00000549585 UNC13AQ9UPW8 1703 aa17.31■□□□□ 0.36
ATP2B1-205ENST00000549585 CUX2O14529 1486 aa17.3■□□□□ 0.36
ATP2B1-205ENST00000549585 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
ATP2B1-205ENST00000549585 NACADO15069 1562 aa17.14■□□□□ 0.33
ATP2B1-205ENST00000549585 FOXD1Q16676 465 aa16.95■□□□□ 0.3
ATP2B1-205ENST00000549585 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
ATP2B1-205ENST00000549585 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
ATP2B1-205ENST00000549585 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
ATP2B1-205ENST00000549585 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
ATP2B1-205ENST00000549585 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
ATP2B1-205ENST00000549585 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
ATP2B1-205ENST00000549585 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
ATP2B1-205ENST00000549585 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
ATP2B1-205ENST00000549585 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
ATP2B1-205ENST00000549585 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
ATP2B1-205ENST00000549585 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
ATP2B1-205ENST00000549585 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
ATP2B1-205ENST00000549585 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
ATP2B1-205ENST00000549585 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
ATP2B1-205ENST00000549585 NESP48681 1621 aa16.12■□□□□ 0.17
ATP2B1-205ENST00000549585 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
ATP2B1-205ENST00000549585 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
ATP2B1-205ENST00000549585 PLPPR3Q6T4P5 718 aa15.95■□□□□ 0.14
ATP2B1-205ENST00000549585 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
ATP2B1-205ENST00000549585 MSH5O43196 834 aa15.87■□□□□ 0.13
ATP2B1-205ENST00000549585 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
ATP2B1-205ENST00000549585 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
ATP2B1-205ENST00000549585 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
ATP2B1-205ENST00000549585 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
ATP2B1-205ENST00000549585 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
ATP2B1-205ENST00000549585 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
ATP2B1-205ENST00000549585 ADRA2BP18089 450 aa15.75■□□□□ 0.11
ATP2B1-205ENST00000549585 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
ATP2B1-205ENST00000549585 WDR62O43379 1518 aa15.72■□□□□ 0.11
ATP2B1-205ENST00000549585 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
ATP2B1-205ENST00000549585 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
ATP2B1-205ENST00000549585 LMTK3Q96Q04 1460 aa15.67■□□□□ 0.1
ATP2B1-205ENST00000549585 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
ATP2B1-205ENST00000549585 SOCS7O14512 581 aa15.59■□□□□ 0.09
ATP2B1-205ENST00000549585 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.09
ATP2B1-205ENST00000549585 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
ATP2B1-205ENST00000549585 FBXO41Q8TF61 875 aa15.52■□□□□ 0.08
ATP2B1-205ENST00000549585 ERCC6L2Q5T890 1561 aa15.5■□□□□ 0.07
ATP2B1-205ENST00000549585 KDM4FA0A1W2PPD8 638 aa15.44■□□□□ 0.06
ATP2B1-205ENST00000549585 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
ATP2B1-205ENST00000549585 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
ATP2B1-205ENST00000549585 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
ATP2B1-205ENST00000549585 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
ATP2B1-205ENST00000549585 HECW2Q9P2P5 1572 aa15.34■□□□□ 0.05
ATP2B1-205ENST00000549585 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
ATP2B1-205ENST00000549585 CHD1O14646 1710 aa15.26■□□□□ 0.03
ATP2B1-205ENST00000549585 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
ATP2B1-205ENST00000549585 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
ATP2B1-205ENST00000549585 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
ATP2B1-205ENST00000549585 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
ATP2B1-205ENST00000549585 FANCD2Q9BXW9 1451 aa15.12■□□□□ 0.01
ATP2B1-205ENST00000549585 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
ATP2B1-205ENST00000549585 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
ATP2B1-205ENST00000549585 KIF13AQ9H1H9 1805 aa15.08■□□□□ 0.01
ATP2B1-205ENST00000549585 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
ATP2B1-205ENST00000549585 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
ATP2B1-205ENST00000549585 IFT140Q96RY7 1462 aa15.03■□□□□ -0
ATP2B1-205ENST00000549585 CLASP1Q7Z460 1538 aa15.02■□□□□ -0
ATP2B1-205ENST00000549585 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
ATP2B1-205ENST00000549585 FBLN2P98095 1184 aa14.99□□□□□ -0.01
ATP2B1-205ENST00000549585 SPATA31D1Q6ZQQ2 1576 aa14.98□□□□□ -0.01
ATP2B1-205ENST00000549585 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
ATP2B1-205ENST00000549585 KDM6BO15054 1643 aa14.97□□□□□ -0.01
ATP2B1-205ENST00000549585 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
ATP2B1-205ENST00000549585 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.04
ATP2B1-205ENST00000549585 CFTRP13569 1480 aa14.76□□□□□ -0.05
ATP2B1-205ENST00000549585 ABCC10Q5T3U5 1492 aa14.72□□□□□ -0.05
ATP2B1-205ENST00000549585 FAM69CQ0P6D2 419 aa14.72□□□□□ -0.05
ATP2B1-205ENST00000549585 DIP2BQ9P265 1576 aa14.68□□□□□ -0.06
ATP2B1-205ENST00000549585 TARBP1Q13395 1621 aaKnown RBP14.67□□□□□ -0.06
ATP2B1-205ENST00000549585 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
ATP2B1-205ENST00000549585 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
ATP2B1-205ENST00000549585 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
ATP2B1-205ENST00000549585 TSPOAP1O95153 1857 aa14.64□□□□□ -0.07
ATP2B1-205ENST00000549585 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
ATP2B1-205ENST00000549585 CERKQ8TCT0 537 aa14.58□□□□□ -0.08
ATP2B1-205ENST00000549585 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
ATP2B1-205ENST00000549585 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
ATP2B1-205ENST00000549585 MAPKBP1O60336 1514 aa14.55□□□□□ -0.08
ATP2B1-205ENST00000549585 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
ATP2B1-205ENST00000549585 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms