RNA–Protein interactions for RNA: ENST00000548765.1

KRT1-202, Transcript of keratin 1, humanhuman

TSL 2

Gene KRT1, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-202ENST00000548765 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
KRT1-202ENST00000548765 ABCC9O60706 1549 aa15.23■□□□□ 0.03
KRT1-202ENST00000548765 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
KRT1-202ENST00000548765 CCDC180Q9P1Z9 1646 aa14.76□□□□□ -0.05
KRT1-202ENST00000548765 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
KRT1-202ENST00000548765 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
KRT1-202ENST00000548765 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
KRT1-202ENST00000548765 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
KRT1-202ENST00000548765 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
KRT1-202ENST00000548765 NACADO15069 1562 aa13.98□□□□□ -0.17
KRT1-202ENST00000548765 DCAF1Q9Y4B6 1507 aa13.97□□□□□ -0.17
KRT1-202ENST00000548765 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
KRT1-202ENST00000548765 MYO15BQ96JP2 1530 aa13.88□□□□□ -0.19
KRT1-202ENST00000548765 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
KRT1-202ENST00000548765 BICRAQ9NZM4 1560 aa13.8□□□□□ -0.2
KRT1-202ENST00000548765 CECR2Q9BXF3 1484 aa13.78□□□□□ -0.2
KRT1-202ENST00000548765 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
KRT1-202ENST00000548765 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
KRT1-202ENST00000548765 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
KRT1-202ENST00000548765 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
KRT1-202ENST00000548765 CUX2O14529 1486 aa13.41□□□□□ -0.26
KRT1-202ENST00000548765 HRCP23327 699 aa13.38□□□□□ -0.27
KRT1-202ENST00000548765 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
KRT1-202ENST00000548765 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
KRT1-202ENST00000548765 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
KRT1-202ENST00000548765 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
KRT1-202ENST00000548765 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
KRT1-202ENST00000548765 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
KRT1-202ENST00000548765 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
KRT1-202ENST00000548765 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
KRT1-202ENST00000548765 BAZ1AQ9NRL2 1556 aaPredicted RBP12.96□□□□□ -0.33
KRT1-202ENST00000548765 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
KRT1-202ENST00000548765 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
KRT1-202ENST00000548765 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
KRT1-202ENST00000548765 NESP48681 1621 aa12.88□□□□□ -0.35
KRT1-202ENST00000548765 WIZO95785 1651 aa12.84□□□□□ -0.35
KRT1-202ENST00000548765 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.35
KRT1-202ENST00000548765 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
KRT1-202ENST00000548765 ATAD2BQ9ULI0 1458 aa12.8□□□□□ -0.36
KRT1-202ENST00000548765 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
KRT1-202ENST00000548765 EEA1Q15075 1411 aa12.77□□□□□ -0.37
KRT1-202ENST00000548765 SMARCA4P51532 1647 aa12.77□□□□□ -0.37
KRT1-202ENST00000548765 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
KRT1-202ENST00000548765 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
KRT1-202ENST00000548765 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
KRT1-202ENST00000548765 FAM9AQ8IZU1 332 aaPredicted RBP12.7□□□□□ -0.38
KRT1-202ENST00000548765 AEBP2Q6ZN18 517 aaPredicted RBP12.69□□□□□ -0.38
KRT1-202ENST00000548765 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
KRT1-202ENST00000548765 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
KRT1-202ENST00000548765 RIMBP3CA6NJZ7 1639 aa12.67□□□□□ -0.38
KRT1-202ENST00000548765 RIMBP3BA6NNM3 1639 aa12.67□□□□□ -0.38
KRT1-202ENST00000548765 RIMBP3Q9UFD9 1639 aa12.67□□□□□ -0.38
KRT1-202ENST00000548765 CCDC88BA6NC98 1476 aa12.64□□□□□ -0.39
KRT1-202ENST00000548765 TNIKQ9UKE5 1360 aa12.61□□□□□ -0.39
KRT1-202ENST00000548765 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
KRT1-202ENST00000548765 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
KRT1-202ENST00000548765 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
KRT1-202ENST00000548765 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
KRT1-202ENST00000548765 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
KRT1-202ENST00000548765 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
KRT1-202ENST00000548765 WDR62O43379 1518 aa12.53□□□□□ -0.4
KRT1-202ENST00000548765 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
KRT1-202ENST00000548765 ARHGEF11O15085 1522 aa12.52□□□□□ -0.41
KRT1-202ENST00000548765 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
KRT1-202ENST00000548765 MRC2Q9UBG0 1479 aa12.5□□□□□ -0.41
KRT1-202ENST00000548765 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
KRT1-202ENST00000548765 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
KRT1-202ENST00000548765 KIF21BO75037 1637 aa12.48□□□□□ -0.41
KRT1-202ENST00000548765 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
KRT1-202ENST00000548765 CCER1Q8TC90 406 aaPredicted RBP12.47□□□□□ -0.41
KRT1-202ENST00000548765 SOGA1O94964 1423 aa12.43□□□□□ -0.42
KRT1-202ENST00000548765 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
KRT1-202ENST00000548765 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
KRT1-202ENST00000548765 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
KRT1-202ENST00000548765 CYB5RLQ6IPT4 315 aa12.38□□□□□ -0.43
KRT1-202ENST00000548765 ARAP1Q96P48 1450 aa12.35□□□□□ -0.43
KRT1-202ENST00000548765 CFTRP13569 1480 aa12.34□□□□□ -0.43
KRT1-202ENST00000548765 CENPBP07199 599 aaPredicted RBP12.34□□□□□ -0.43
KRT1-202ENST00000548765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
KRT1-202ENST00000548765 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
KRT1-202ENST00000548765 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
KRT1-202ENST00000548765 CLIP1P30622 1438 aa12.31□□□□□ -0.44
KRT1-202ENST00000548765 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
KRT1-202ENST00000548765 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
KRT1-202ENST00000548765 APLP2Q06481 763 aa12.3□□□□□ -0.44
KRT1-202ENST00000548765 ERICH3Q5RHP9 1530 aa12.3□□□□□ -0.44
KRT1-202ENST00000548765 RUSC2Q8N2Y8 1516 aa12.3□□□□□ -0.44
KRT1-202ENST00000548765 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
KRT1-202ENST00000548765 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
KRT1-202ENST00000548765 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
KRT1-202ENST00000548765 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
KRT1-202ENST00000548765 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
KRT1-202ENST00000548765 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
KRT1-202ENST00000548765 URB2Q14146 1524 aaKnown RBP12.2□□□□□ -0.46
KRT1-202ENST00000548765 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
KRT1-202ENST00000548765 CHD1O14646 1710 aa12.17□□□□□ -0.46
KRT1-202ENST00000548765 PRXQ9BXM0 1461 aa12.17□□□□□ -0.46
KRT1-202ENST00000548765 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
KRT1-202ENST00000548765 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
KRT1-202ENST00000548765 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms