RNA–Protein interactions for RNA: ENST00000548050.1

LINC02297-201, Transcript of long intergenic non-protein coding RNA 2297, humanhuman

TSL 1 (best) BASIC

Gene LINC02297, Length 1,493 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02297-201ENST00000548050 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.99
LINC02297-201ENST00000548050 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
LINC02297-201ENST00000548050 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
LINC02297-201ENST00000548050 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.42
LINC02297-201ENST00000548050 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
LINC02297-201ENST00000548050 POTEDQ86YR6 584 aa23.26■■□□□ 1.31
LINC02297-201ENST00000548050 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
LINC02297-201ENST00000548050 FOXD1Q16676 465 aa22.28■■□□□ 1.16
LINC02297-201ENST00000548050 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
LINC02297-201ENST00000548050 ABCC9O60706 1549 aa21.85■■□□□ 1.09
LINC02297-201ENST00000548050 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
LINC02297-201ENST00000548050 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
LINC02297-201ENST00000548050 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
LINC02297-201ENST00000548050 MSH5O43196 834 aa21.58■■□□□ 1.05
LINC02297-201ENST00000548050 NACADO15069 1562 aa21.46■■□□□ 1.03
LINC02297-201ENST00000548050 SHROOM4Q9ULL8 1493 aa21.31■■□□□ 1
LINC02297-201ENST00000548050 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
LINC02297-201ENST00000548050 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
LINC02297-201ENST00000548050 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
LINC02297-201ENST00000548050 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
LINC02297-201ENST00000548050 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
LINC02297-201ENST00000548050 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
LINC02297-201ENST00000548050 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
LINC02297-201ENST00000548050 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
LINC02297-201ENST00000548050 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
LINC02297-201ENST00000548050 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
LINC02297-201ENST00000548050 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
LINC02297-201ENST00000548050 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
LINC02297-201ENST00000548050 WIZO95785 1651 aa20.14■□□□□ 0.81
LINC02297-201ENST00000548050 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
LINC02297-201ENST00000548050 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
LINC02297-201ENST00000548050 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
LINC02297-201ENST00000548050 TOP2AP11388 1531 aaKnown RBP19.94■□□□□ 0.78
LINC02297-201ENST00000548050 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
LINC02297-201ENST00000548050 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
LINC02297-201ENST00000548050 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
LINC02297-201ENST00000548050 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
LINC02297-201ENST00000548050 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
LINC02297-201ENST00000548050 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
LINC02297-201ENST00000548050 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
LINC02297-201ENST00000548050 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
LINC02297-201ENST00000548050 ADRA2BP18089 450 aa19.56■□□□□ 0.72
LINC02297-201ENST00000548050 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
LINC02297-201ENST00000548050 CFTRP13569 1480 aa19.35■□□□□ 0.69
LINC02297-201ENST00000548050 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
LINC02297-201ENST00000548050 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
LINC02297-201ENST00000548050 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
LINC02297-201ENST00000548050 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
LINC02297-201ENST00000548050 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
LINC02297-201ENST00000548050 NESP48681 1621 aa19.17■□□□□ 0.66
LINC02297-201ENST00000548050 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
LINC02297-201ENST00000548050 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
LINC02297-201ENST00000548050 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
LINC02297-201ENST00000548050 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
LINC02297-201ENST00000548050 CUX1P39880 1505 aa19.03■□□□□ 0.64
LINC02297-201ENST00000548050 TOP2BQ02880 1626 aa19.02■□□□□ 0.64
LINC02297-201ENST00000548050 BIVM-ERCC5R4GMW8 1640 aa19.02■□□□□ 0.63
LINC02297-201ENST00000548050 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
LINC02297-201ENST00000548050 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
LINC02297-201ENST00000548050 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
LINC02297-201ENST00000548050 SOGA1O94964 1423 aa18.89■□□□□ 0.61
LINC02297-201ENST00000548050 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
LINC02297-201ENST00000548050 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
LINC02297-201ENST00000548050 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
LINC02297-201ENST00000548050 FAM9AQ8IZU1 332 aaPredicted RBP18.85■□□□□ 0.61
LINC02297-201ENST00000548050 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
LINC02297-201ENST00000548050 FGD5Q6ZNL6 1462 aa18.81■□□□□ 0.6
LINC02297-201ENST00000548050 EEA1Q15075 1411 aa18.81■□□□□ 0.6
LINC02297-201ENST00000548050 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
LINC02297-201ENST00000548050 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.6
LINC02297-201ENST00000548050 POLA1P09884 1462 aaPredicted RBP18.75■□□□□ 0.59
LINC02297-201ENST00000548050 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
LINC02297-201ENST00000548050 ERCC6Q03468 1493 aa18.7■□□□□ 0.58
LINC02297-201ENST00000548050 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
LINC02297-201ENST00000548050 WDR62O43379 1518 aa18.69■□□□□ 0.58
LINC02297-201ENST00000548050 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
LINC02297-201ENST00000548050 KIF27Q86VH2 1401 aa18.67■□□□□ 0.58
LINC02297-201ENST00000548050 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
LINC02297-201ENST00000548050 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
LINC02297-201ENST00000548050 CUX2O14529 1486 aa18.66■□□□□ 0.58
LINC02297-201ENST00000548050 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
LINC02297-201ENST00000548050 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
LINC02297-201ENST00000548050 KIF21BO75037 1637 aa18.58■□□□□ 0.57
LINC02297-201ENST00000548050 IGF1RP08069 1367 aa18.57■□□□□ 0.56
LINC02297-201ENST00000548050 PRXQ9BXM0 1461 aa18.57■□□□□ 0.56
LINC02297-201ENST00000548050 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
LINC02297-201ENST00000548050 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
LINC02297-201ENST00000548050 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
LINC02297-201ENST00000548050 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
LINC02297-201ENST00000548050 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
LINC02297-201ENST00000548050 RAPGEF2Q9Y4G8 1499 aa18.51■□□□□ 0.55
LINC02297-201ENST00000548050 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
LINC02297-201ENST00000548050 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
LINC02297-201ENST00000548050 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
LINC02297-201ENST00000548050 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
LINC02297-201ENST00000548050 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
LINC02297-201ENST00000548050 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
LINC02297-201ENST00000548050 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
LINC02297-201ENST00000548050 CUL7Q14999 1698 aa18.38■□□□□ 0.53
LINC02297-201ENST00000548050 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms