RNA–Protein interactions for RNA: ENST00000547165.5

DDX23-203, Transcript of DEAD-box helicase 23, humanhuman

TSL 5

Gene DDX23, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-203ENST00000547165 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
DDX23-203ENST00000547165 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
DDX23-203ENST00000547165 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
DDX23-203ENST00000547165 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
DDX23-203ENST00000547165 ABCC9O60706 1549 aa15.25■□□□□ 0.03
DDX23-203ENST00000547165 ZCCHC6Q5VYS8 1495 aaKnown RBP15.21■□□□□ 0.03
DDX23-203ENST00000547165 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
DDX23-203ENST00000547165 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
DDX23-203ENST00000547165 DCAF1Q9Y4B6 1507 aa15.02■□□□□ -0
DDX23-203ENST00000547165 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
DDX23-203ENST00000547165 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
DDX23-203ENST00000547165 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
DDX23-203ENST00000547165 NACADO15069 1562 aa14.64□□□□□ -0.07
DDX23-203ENST00000547165 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
DDX23-203ENST00000547165 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
DDX23-203ENST00000547165 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
DDX23-203ENST00000547165 SCRIBQ14160 1630 aa14.39□□□□□ -0.11
DDX23-203ENST00000547165 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDX23-203ENST00000547165 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.15
DDX23-203ENST00000547165 FOXD1Q16676 465 aa14.01□□□□□ -0.17
DDX23-203ENST00000547165 UNC13AQ9UPW8 1703 aa14□□□□□ -0.17
DDX23-203ENST00000547165 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
DDX23-203ENST00000547165 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
DDX23-203ENST00000547165 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
DDX23-203ENST00000547165 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
DDX23-203ENST00000547165 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
DDX23-203ENST00000547165 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
DDX23-203ENST00000547165 WIZO95785 1651 aa13.8□□□□□ -0.2
DDX23-203ENST00000547165 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
DDX23-203ENST00000547165 PEG3Q9GZU2 1588 aa13.7□□□□□ -0.22
DDX23-203ENST00000547165 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
DDX23-203ENST00000547165 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
DDX23-203ENST00000547165 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
DDX23-203ENST00000547165 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
DDX23-203ENST00000547165 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
DDX23-203ENST00000547165 CCDC88BA6NC98 1476 aa13.59□□□□□ -0.23
DDX23-203ENST00000547165 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
DDX23-203ENST00000547165 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
DDX23-203ENST00000547165 NCAPD3P42695 1498 aa13.49□□□□□ -0.25
DDX23-203ENST00000547165 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
DDX23-203ENST00000547165 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
DDX23-203ENST00000547165 EEA1Q15075 1411 aa13.31□□□□□ -0.28
DDX23-203ENST00000547165 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
DDX23-203ENST00000547165 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
DDX23-203ENST00000547165 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
DDX23-203ENST00000547165 ADRA2BP18089 450 aa13.28□□□□□ -0.28
DDX23-203ENST00000547165 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
DDX23-203ENST00000547165 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
DDX23-203ENST00000547165 CFTRP13569 1480 aa13.22□□□□□ -0.29
DDX23-203ENST00000547165 CUX2O14529 1486 aa13.19□□□□□ -0.3
DDX23-203ENST00000547165 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
DDX23-203ENST00000547165 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
DDX23-203ENST00000547165 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
DDX23-203ENST00000547165 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
DDX23-203ENST00000547165 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
DDX23-203ENST00000547165 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
DDX23-203ENST00000547165 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
DDX23-203ENST00000547165 SOGA1O94964 1423 aa13.11□□□□□ -0.31
DDX23-203ENST00000547165 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
DDX23-203ENST00000547165 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
DDX23-203ENST00000547165 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
DDX23-203ENST00000547165 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.33
DDX23-203ENST00000547165 CUX1P39880 1505 aa13.02□□□□□ -0.33
DDX23-203ENST00000547165 KIF21BO75037 1637 aa13.02□□□□□ -0.33
DDX23-203ENST00000547165 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
DDX23-203ENST00000547165 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
DDX23-203ENST00000547165 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
DDX23-203ENST00000547165 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
DDX23-203ENST00000547165 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
DDX23-203ENST00000547165 MSH5O43196 834 aa12.99□□□□□ -0.33
DDX23-203ENST00000547165 NESP48681 1621 aa12.99□□□□□ -0.33
DDX23-203ENST00000547165 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
DDX23-203ENST00000547165 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.33
DDX23-203ENST00000547165 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.34
DDX23-203ENST00000547165 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
DDX23-203ENST00000547165 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
DDX23-203ENST00000547165 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
DDX23-203ENST00000547165 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
DDX23-203ENST00000547165 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
DDX23-203ENST00000547165 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
DDX23-203ENST00000547165 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
DDX23-203ENST00000547165 CLIP1P30622 1438 aa12.84□□□□□ -0.35
DDX23-203ENST00000547165 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
DDX23-203ENST00000547165 ABCA10Q8WWZ4 1543 aa12.81□□□□□ -0.36
DDX23-203ENST00000547165 IGF1RP08069 1367 aa12.8□□□□□ -0.36
DDX23-203ENST00000547165 APLP2Q06481 763 aa12.79□□□□□ -0.36
DDX23-203ENST00000547165 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
DDX23-203ENST00000547165 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
DDX23-203ENST00000547165 HRCP23327 699 aa12.77□□□□□ -0.37
DDX23-203ENST00000547165 KIF21AQ7Z4S6 1674 aa12.76□□□□□ -0.37
DDX23-203ENST00000547165 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
DDX23-203ENST00000547165 VPS8Q8N3P4 1428 aa12.75□□□□□ -0.37
DDX23-203ENST00000547165 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
DDX23-203ENST00000547165 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
DDX23-203ENST00000547165 CUL7Q14999 1698 aa12.71□□□□□ -0.37
DDX23-203ENST00000547165 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
DDX23-203ENST00000547165 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
DDX23-203ENST00000547165 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
DDX23-203ENST00000547165 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
DDX23-203ENST00000547165 PPARGC1BQ86YN6 1023 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms