RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, humanhuman

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-208ENST00000547148 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
PFKM-208ENST00000547148 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
PFKM-208ENST00000547148 ABCC9O60706 1549 aa24.17■■□□□ 1.46
PFKM-208ENST00000547148 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
PFKM-208ENST00000547148 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
PFKM-208ENST00000547148 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
PFKM-208ENST00000547148 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
PFKM-208ENST00000547148 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
PFKM-208ENST00000547148 NACADO15069 1562 aa23.31■■□□□ 1.32
PFKM-208ENST00000547148 RB1CC1Q8TDY2 1594 aa23.21■■□□□ 1.31
PFKM-208ENST00000547148 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
PFKM-208ENST00000547148 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
PFKM-208ENST00000547148 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.2
PFKM-208ENST00000547148 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
PFKM-208ENST00000547148 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
PFKM-208ENST00000547148 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
PFKM-208ENST00000547148 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
PFKM-208ENST00000547148 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
PFKM-208ENST00000547148 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
PFKM-208ENST00000547148 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
PFKM-208ENST00000547148 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
PFKM-208ENST00000547148 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
PFKM-208ENST00000547148 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
PFKM-208ENST00000547148 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
PFKM-208ENST00000547148 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
PFKM-208ENST00000547148 SMARCA2P51531 1590 aa21.58■■□□□ 1.05
PFKM-208ENST00000547148 WIZO95785 1651 aa21.56■■□□□ 1.04
PFKM-208ENST00000547148 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
PFKM-208ENST00000547148 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
PFKM-208ENST00000547148 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
PFKM-208ENST00000547148 SUPT5HO00267 1087 aaKnown RBP21.43■■□□□ 1.02
PFKM-208ENST00000547148 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
PFKM-208ENST00000547148 CUX2O14529 1486 aa21.18■□□□□ 0.98
PFKM-208ENST00000547148 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
PFKM-208ENST00000547148 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
PFKM-208ENST00000547148 CFTRP13569 1480 aa20.9■□□□□ 0.94
PFKM-208ENST00000547148 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
PFKM-208ENST00000547148 NESP48681 1621 aa20.86■□□□□ 0.93
PFKM-208ENST00000547148 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
PFKM-208ENST00000547148 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
PFKM-208ENST00000547148 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
PFKM-208ENST00000547148 PDS5BQ9NTI5 1447 aa20.69■□□□□ 0.9
PFKM-208ENST00000547148 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
PFKM-208ENST00000547148 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
PFKM-208ENST00000547148 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
PFKM-208ENST00000547148 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
PFKM-208ENST00000547148 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
PFKM-208ENST00000547148 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
PFKM-208ENST00000547148 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
PFKM-208ENST00000547148 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
PFKM-208ENST00000547148 WDR62O43379 1518 aa20.43■□□□□ 0.86
PFKM-208ENST00000547148 CUX1P39880 1505 aa20.43■□□□□ 0.86
PFKM-208ENST00000547148 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
PFKM-208ENST00000547148 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
PFKM-208ENST00000547148 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
PFKM-208ENST00000547148 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
PFKM-208ENST00000547148 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
PFKM-208ENST00000547148 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
PFKM-208ENST00000547148 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
PFKM-208ENST00000547148 FGD5Q6ZNL6 1462 aa20.27■□□□□ 0.84
PFKM-208ENST00000547148 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
PFKM-208ENST00000547148 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
PFKM-208ENST00000547148 IFT140Q96RY7 1462 aa20.14■□□□□ 0.81
PFKM-208ENST00000547148 SOGA1O94964 1423 aa20.14■□□□□ 0.81
PFKM-208ENST00000547148 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
PFKM-208ENST00000547148 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
PFKM-208ENST00000547148 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
PFKM-208ENST00000547148 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
PFKM-208ENST00000547148 TDRD9Q8NDG6 1382 aaKnown RBP19.99■□□□□ 0.79
PFKM-208ENST00000547148 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
PFKM-208ENST00000547148 EIF4G3O43432 1585 aaKnown RBP19.97■□□□□ 0.79
PFKM-208ENST00000547148 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
PFKM-208ENST00000547148 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.79
PFKM-208ENST00000547148 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
PFKM-208ENST00000547148 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
PFKM-208ENST00000547148 EEA1Q15075 1411 aa19.88■□□□□ 0.77
PFKM-208ENST00000547148 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
PFKM-208ENST00000547148 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
PFKM-208ENST00000547148 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
PFKM-208ENST00000547148 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
PFKM-208ENST00000547148 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
PFKM-208ENST00000547148 PBRM1Q86U86 1689 aa19.85■□□□□ 0.77
PFKM-208ENST00000547148 IGF1RP08069 1367 aa19.84■□□□□ 0.77
PFKM-208ENST00000547148 AEBP2Q6ZN18 517 aaPredicted RBP19.82■□□□□ 0.76
PFKM-208ENST00000547148 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
PFKM-208ENST00000547148 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
PFKM-208ENST00000547148 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
PFKM-208ENST00000547148 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
PFKM-208ENST00000547148 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
PFKM-208ENST00000547148 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
PFKM-208ENST00000547148 CUL7Q14999 1698 aa19.75■□□□□ 0.75
PFKM-208ENST00000547148 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
PFKM-208ENST00000547148 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
PFKM-208ENST00000547148 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
PFKM-208ENST00000547148 CARMIL1Q5VZK9 1371 aa19.71■□□□□ 0.75
PFKM-208ENST00000547148 CYB5RLQ6IPT4 315 aa19.7■□□□□ 0.74
PFKM-208ENST00000547148 SYNJ2O15056 1496 aa19.7■□□□□ 0.74
PFKM-208ENST00000547148 KIF21BO75037 1637 aa19.67■□□□□ 0.74
PFKM-208ENST00000547148 RAPGEF2Q9Y4G8 1499 aa19.66■□□□□ 0.74
PFKM-208ENST00000547148 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms