RNA–Protein interactions for RNA: ENST00000546523.1

LINC02354-201, Transcript of long intergenic non-protein coding RNA 2354, humanhuman

TSL 3

Gene LINC02354, Length 353 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02354-201ENST00000546523 NISCHQ9Y2I1 1504 aa24.26■■□□□ 1.47
LINC02354-201ENST00000546523 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
LINC02354-201ENST00000546523 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
LINC02354-201ENST00000546523 CCDC180Q9P1Z9 1646 aa21.28■■□□□ 1
LINC02354-201ENST00000546523 ABCC9O60706 1549 aa20.38■□□□□ 0.85
LINC02354-201ENST00000546523 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
LINC02354-201ENST00000546523 DCAF8L2P0C7V8 631 aa20.1■□□□□ 0.81
LINC02354-201ENST00000546523 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
LINC02354-201ENST00000546523 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
LINC02354-201ENST00000546523 NACADO15069 1562 aa19.89■□□□□ 0.77
LINC02354-201ENST00000546523 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
LINC02354-201ENST00000546523 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
LINC02354-201ENST00000546523 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
LINC02354-201ENST00000546523 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
LINC02354-201ENST00000546523 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
LINC02354-201ENST00000546523 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
LINC02354-201ENST00000546523 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
LINC02354-201ENST00000546523 CECR2Q9BXF3 1484 aa18.89■□□□□ 0.61
LINC02354-201ENST00000546523 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
LINC02354-201ENST00000546523 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
LINC02354-201ENST00000546523 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
LINC02354-201ENST00000546523 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
LINC02354-201ENST00000546523 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
LINC02354-201ENST00000546523 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
LINC02354-201ENST00000546523 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
LINC02354-201ENST00000546523 WIZO95785 1651 aa18.57■□□□□ 0.56
LINC02354-201ENST00000546523 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
LINC02354-201ENST00000546523 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
LINC02354-201ENST00000546523 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
LINC02354-201ENST00000546523 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
LINC02354-201ENST00000546523 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
LINC02354-201ENST00000546523 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
LINC02354-201ENST00000546523 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
LINC02354-201ENST00000546523 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
LINC02354-201ENST00000546523 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
LINC02354-201ENST00000546523 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
LINC02354-201ENST00000546523 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
LINC02354-201ENST00000546523 CFTRP13569 1480 aa17.88■□□□□ 0.45
LINC02354-201ENST00000546523 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
LINC02354-201ENST00000546523 NESP48681 1621 aa17.82■□□□□ 0.44
LINC02354-201ENST00000546523 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
LINC02354-201ENST00000546523 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
LINC02354-201ENST00000546523 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
LINC02354-201ENST00000546523 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
LINC02354-201ENST00000546523 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
LINC02354-201ENST00000546523 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
LINC02354-201ENST00000546523 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
LINC02354-201ENST00000546523 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
LINC02354-201ENST00000546523 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
LINC02354-201ENST00000546523 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
LINC02354-201ENST00000546523 CUX1P39880 1505 aa17.54■□□□□ 0.4
LINC02354-201ENST00000546523 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
LINC02354-201ENST00000546523 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
LINC02354-201ENST00000546523 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
LINC02354-201ENST00000546523 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
LINC02354-201ENST00000546523 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
LINC02354-201ENST00000546523 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
LINC02354-201ENST00000546523 ADRA2BP18089 450 aa17.46■□□□□ 0.39
LINC02354-201ENST00000546523 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
LINC02354-201ENST00000546523 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
LINC02354-201ENST00000546523 KCNA4P22459 653 aa17.45■□□□□ 0.38
LINC02354-201ENST00000546523 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
LINC02354-201ENST00000546523 THOC2Q8NI27 1593 aaKnown RBP17.39■□□□□ 0.37
LINC02354-201ENST00000546523 WDR62O43379 1518 aa17.37■□□□□ 0.37
LINC02354-201ENST00000546523 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
LINC02354-201ENST00000546523 SOGA1O94964 1423 aa17.31■□□□□ 0.36
LINC02354-201ENST00000546523 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
LINC02354-201ENST00000546523 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
LINC02354-201ENST00000546523 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
LINC02354-201ENST00000546523 CUX2O14529 1486 aa17.25■□□□□ 0.35
LINC02354-201ENST00000546523 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
LINC02354-201ENST00000546523 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
LINC02354-201ENST00000546523 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
LINC02354-201ENST00000546523 EEA1Q15075 1411 aa17.2■□□□□ 0.34
LINC02354-201ENST00000546523 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
LINC02354-201ENST00000546523 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
LINC02354-201ENST00000546523 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
LINC02354-201ENST00000546523 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
LINC02354-201ENST00000546523 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
LINC02354-201ENST00000546523 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
LINC02354-201ENST00000546523 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
LINC02354-201ENST00000546523 AQRO60306 1485 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC02354-201ENST00000546523 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
LINC02354-201ENST00000546523 IGF1RP08069 1367 aa17.08■□□□□ 0.32
LINC02354-201ENST00000546523 LOC105371045A0A1W2PR82 267 aa17.07■□□□□ 0.32
LINC02354-201ENST00000546523 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
LINC02354-201ENST00000546523 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
LINC02354-201ENST00000546523 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
LINC02354-201ENST00000546523 KIF21BO75037 1637 aa17.01■□□□□ 0.31
LINC02354-201ENST00000546523 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
LINC02354-201ENST00000546523 GRIN2BQ13224 1484 aa17■□□□□ 0.31
LINC02354-201ENST00000546523 CARMIL1Q5VZK9 1371 aa16.98■□□□□ 0.31
LINC02354-201ENST00000546523 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
LINC02354-201ENST00000546523 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
LINC02354-201ENST00000546523 CUL7Q14999 1698 aa16.96■□□□□ 0.31
LINC02354-201ENST00000546523 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
LINC02354-201ENST00000546523 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
LINC02354-201ENST00000546523 FOXD1Q16676 465 aa16.91■□□□□ 0.3
LINC02354-201ENST00000546523 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
LINC02354-201ENST00000546523 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms