RNA–Protein interactions for RNA: ENST00000544921.5

FAM60A-209, Transcript of Protein FAM60A, humanhuman

TSL 4

Gene FAM60A, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-209ENST00000544921 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
FAM60A-209ENST00000544921 POTEDQ86YR6 584 aa15.07■□□□□ 0
FAM60A-209ENST00000544921 CHIC1Q5VXU3 224 aa14.71□□□□□ -0.05
FAM60A-209ENST00000544921 SENP3Q9H4L4 574 aaPredicted RBP13.56□□□□□ -0.24
FAM60A-209ENST00000544921 NISCHQ9Y2I1 1504 aa13.4□□□□□ -0.26
FAM60A-209ENST00000544921 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
FAM60A-209ENST00000544921 FOXD1Q16676 465 aa12.7□□□□□ -0.38
FAM60A-209ENST00000544921 MSH5O43196 834 aa12.19□□□□□ -0.46
FAM60A-209ENST00000544921 CCDC180Q9P1Z9 1646 aa11.85□□□□□ -0.51
FAM60A-209ENST00000544921 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
FAM60A-209ENST00000544921 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
FAM60A-209ENST00000544921 POTEHQ6S545 545 aa11.43□□□□□ -0.58
FAM60A-209ENST00000544921 ABCC9O60706 1549 aa11.35□□□□□ -0.59
FAM60A-209ENST00000544921 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
FAM60A-209ENST00000544921 ADRA2BP18089 450 aa11.24□□□□□ -0.61
FAM60A-209ENST00000544921 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
FAM60A-209ENST00000544921 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
FAM60A-209ENST00000544921 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
FAM60A-209ENST00000544921 NACADO15069 1562 aa11.03□□□□□ -0.64
FAM60A-209ENST00000544921 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
FAM60A-209ENST00000544921 MYO15BQ96JP2 1530 aa11.03□□□□□ -0.64
FAM60A-209ENST00000544921 RB1CC1Q8TDY2 1594 aa11□□□□□ -0.65
FAM60A-209ENST00000544921 UNC13AQ9UPW8 1703 aa10.89□□□□□ -0.67
FAM60A-209ENST00000544921 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
FAM60A-209ENST00000544921 BICRAQ9NZM4 1560 aa10.73□□□□□ -0.69
FAM60A-209ENST00000544921 SHROOM4Q9ULL8 1493 aa10.72□□□□□ -0.69
FAM60A-209ENST00000544921 DMRT2Q9Y5R5 561 aa10.64□□□□□ -0.71
FAM60A-209ENST00000544921 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
FAM60A-209ENST00000544921 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
FAM60A-209ENST00000544921 CECR2Q9BXF3 1484 aa10.43□□□□□ -0.74
FAM60A-209ENST00000544921 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
FAM60A-209ENST00000544921 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
FAM60A-209ENST00000544921 MROH2BQ7Z745 1585 aa10.36□□□□□ -0.75
FAM60A-209ENST00000544921 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
FAM60A-209ENST00000544921 RNF39Q9H2S5 420 aa10.33□□□□□ -0.76
FAM60A-209ENST00000544921 SCAF1Q9H7N4 1312 aaKnown RBP10.31□□□□□ -0.76
FAM60A-209ENST00000544921 CC2D2AQ9P2K1 1620 aa10.3□□□□□ -0.76
FAM60A-209ENST00000544921 WIZO95785 1651 aa10.29□□□□□ -0.76
FAM60A-209ENST00000544921 RSF1Q96T23 1441 aaPredicted RBP10.29□□□□□ -0.76
FAM60A-209ENST00000544921 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
FAM60A-209ENST00000544921 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
FAM60A-209ENST00000544921 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
FAM60A-209ENST00000544921 DNAJC5BQ9UF47 199 aa10.22□□□□□ -0.77
FAM60A-209ENST00000544921 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
FAM60A-209ENST00000544921 DCAF8L1A6NGE4 600 aa10.2□□□□□ -0.78
FAM60A-209ENST00000544921 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
FAM60A-209ENST00000544921 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
FAM60A-209ENST00000544921 SUPT5HO00267 1087 aaKnown RBP10.16□□□□□ -0.78
FAM60A-209ENST00000544921 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
FAM60A-209ENST00000544921 TOP2AP11388 1531 aaKnown RBP10.14□□□□□ -0.79
FAM60A-209ENST00000544921 BAZ1BQ9UIG0 1483 aaKnown RBP10.14□□□□□ -0.79
FAM60A-209ENST00000544921 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
FAM60A-209ENST00000544921 HOXD11P31277 338 aaPredicted RBP9.97□□□□□ -0.81
FAM60A-209ENST00000544921 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
FAM60A-209ENST00000544921 NESP48681 1621 aa9.91□□□□□ -0.82
FAM60A-209ENST00000544921 CFTRP13569 1480 aa9.89□□□□□ -0.83
FAM60A-209ENST00000544921 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
FAM60A-209ENST00000544921 PPP4R3CPQ6ZMV5 832 aa9.87□□□□□ -0.83
FAM60A-209ENST00000544921 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
FAM60A-209ENST00000544921 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
FAM60A-209ENST00000544921 SP7Q8TDD2 431 aaPredicted RBP9.8□□□□□ -0.84
FAM60A-209ENST00000544921 FANCD2Q9BXW9 1451 aa9.78□□□□□ -0.84
FAM60A-209ENST00000544921 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
FAM60A-209ENST00000544921 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
FAM60A-209ENST00000544921 CEP164Q9UPV0 1460 aa9.74□□□□□ -0.85
FAM60A-209ENST00000544921 THOC2Q8NI27 1593 aaKnown RBP9.73□□□□□ -0.85
FAM60A-209ENST00000544921 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
FAM60A-209ENST00000544921 RNF216Q9NWF9 866 aaPredicted RBP9.71□□□□□ -0.86
FAM60A-209ENST00000544921 CUX1P39880 1505 aa9.71□□□□□ -0.86
FAM60A-209ENST00000544921 URB2Q14146 1524 aaKnown RBP9.71□□□□□ -0.86
FAM60A-209ENST00000544921 SYNJ1O43426 1573 aa9.71□□□□□ -0.86
FAM60A-209ENST00000544921 BIVM-ERCC5R4GMW8 1640 aa9.7□□□□□ -0.86
FAM60A-209ENST00000544921 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
FAM60A-209ENST00000544921 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
FAM60A-209ENST00000544921 MRC2Q9UBG0 1479 aa9.68□□□□□ -0.86
FAM60A-209ENST00000544921 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
FAM60A-209ENST00000544921 WDR62O43379 1518 aa9.67□□□□□ -0.86
FAM60A-209ENST00000544921 TOPBP1Q92547 1522 aa9.67□□□□□ -0.86
FAM60A-209ENST00000544921 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
FAM60A-209ENST00000544921 FGD5Q6ZNL6 1462 aa9.61□□□□□ -0.87
FAM60A-209ENST00000544921 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
FAM60A-209ENST00000544921 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
FAM60A-209ENST00000544921 TARBP1Q13395 1621 aaKnown RBP9.59□□□□□ -0.87
FAM60A-209ENST00000544921 CUX2O14529 1486 aa9.59□□□□□ -0.87
FAM60A-209ENST00000544921 RAD54L2Q9Y4B4 1467 aa9.56□□□□□ -0.88
FAM60A-209ENST00000544921 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
FAM60A-209ENST00000544921 SOGA1O94964 1423 aa9.52□□□□□ -0.89
FAM60A-209ENST00000544921 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
FAM60A-209ENST00000544921 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
FAM60A-209ENST00000544921 ABCA5Q8WWZ7 1642 aa9.51□□□□□ -0.89
FAM60A-209ENST00000544921 ZNF608Q9ULD9 1512 aaPredicted RBP9.51□□□□□ -0.89
FAM60A-209ENST00000544921 RUSC2Q8N2Y8 1516 aa9.5□□□□□ -0.89
FAM60A-209ENST00000544921 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
FAM60A-209ENST00000544921 PBRM1Q86U86 1689 aa9.49□□□□□ -0.89
FAM60A-209ENST00000544921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.48□□□□□ -0.892e-6■□□□□ 8.5
FAM60A-209ENST00000544921 TDRD9Q8NDG6 1382 aaKnown RBP9.46□□□□□ -0.9
FAM60A-209ENST00000544921 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.91e-7■■■■■ 37.5
FAM60A-209ENST00000544921 GAPVD1Q14C86 1478 aa9.44□□□□□ -0.9
FAM60A-209ENST00000544921 KIF27Q86VH2 1401 aa9.43□□□□□ -0.9
FAM60A-209ENST00000544921 DSG3P32926 999 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms